RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C RPL40BP0CH09 128 aaKnown RBP1.04□□□□□ -2.24
YPT52YKR014C DYN2Q02647 92 aa1.04□□□□□ -2.24
YPT52YKR014C MGR2Q02889 113 aa1.04□□□□□ -2.24
YPT52YKR014C AIM36Q03798 255 aa1.04□□□□□ -2.24
YPT52YKR014C RPS22BQ3E7Y3 130 aaKnown RBP1.04□□□□□ -2.24
YPT52YKR014C MOT1P32333 1867 aa1.03□□□□□ -2.24
YPT52YKR014C ECM29P38737 1868 aa1.03□□□□□ -2.24
YPT52YKR014C SFT1P43682 97 aa1.03□□□□□ -2.24
YPT52YKR014C MPC1P53157 130 aaKnown RBP1.03□□□□□ -2.24
YPT52YKR014C PRM3Q08931 133 aa1.03□□□□□ -2.24
YPT52YKR014C RPL22AP05749 121 aaKnown RBP1.02□□□□□ -2.25
YPT52YKR014C PAU21P0CE86 164 aa1.02□□□□□ -2.25
YPT52YKR014C PAU22P0CE87 164 aa1.02□□□□□ -2.25
YPT52YKR014C HAP3P13434 144 aa1.02□□□□□ -2.25
YPT52YKR014C UTP11P34247 250 aaPredicted RBP1.02□□□□□ -2.25
YPT52YKR014C YLR296WQ05898 108 aa1.02□□□□□ -2.25
YPT52YKR014C MRPL11P36521 249 aaPredicted RBP1.01□□□□□ -2.25
YPT52YKR014C HSP10P38910 106 aa1.01□□□□□ -2.25
YPT52YKR014C YMR321CQ04898 105 aa1.01□□□□□ -2.25
YPT52YKR014C COA4Q05809 96 aa1.01□□□□□ -2.25
YPT52YKR014C GTT2Q12390 233 aa1.01□□□□□ -2.25
YPT52YKR014C YHR213W-BQ8TGK1 99 aa1.01□□□□□ -2.25
YPT52YKR014C PFY1P07274 126 aa1□□□□□ -2.25
YPT52YKR014C HHY1P39982 102 aa1□□□□□ -2.25
YPT52YKR014C MRP49P32388 137 aa0.99□□□□□ -2.25
YPT52YKR014C AIM4P38305 123 aaPredicted RBP0.99□□□□□ -2.25
YPT52YKR014C GAT4P40569 121 aa0.99□□□□□ -2.25
YPT52YKR014C LAA1P39526 2014 aa0.98□□□□□ -2.25
YPT52YKR014C RTC6O14464 93 aa0.98□□□□□ -2.25
YPT52YKR014C GSP1P32835 219 aaKnown RBP0.98□□□□□ -2.25
YPT52YKR014C YDR524C-BQ3E6R4 66 aa0.98□□□□□ -2.25
YPT52YKR014C SLO1Q3E784 85 aa0.98□□□□□ -2.25
YPT52YKR014C COA6Q3E846 104 aa0.98□□□□□ -2.25
YPT52YKR014C IRA2P19158 3079 aa0.97□□□□□ -2.25
YPT52YKR014C AIM18P38884 321 aa0.97□□□□□ -2.25
YPT52YKR014C ERV14P53173 138 aa0.97□□□□□ -2.25
YPT52YKR014C SAE3P89114 91 aa0.97□□□□□ -2.25
YPT52YKR014C LDB18Q07887 179 aa0.97□□□□□ -2.25
YPT52YKR014C SEC59P20048 519 aa0.96□□□□□ -2.26
YPT52YKR014C RPL36BO14455 100 aaKnown RBP0.95□□□□□ -2.26
YPT52YKR014C RPL36AP05745 100 aaPredicted RBP0.95□□□□□ -2.26
YPT52YKR014C YSF3P0C074 85 aaPredicted RBP0.95□□□□□ -2.26
YPT52YKR014C YMR141CP40211 102 aa0.95□□□□□ -2.26
YPT52YKR014C FIT3Q08907 204 aa0.95□□□□□ -2.26
YPT52YKR014C YLR118CQ12354 227 aa0.95□□□□□ -2.26
YPT52YKR014C MED11Q99278 115 aa0.95□□□□□ -2.26
YPT52YKR014C YKL044WP36092 106 aa0.94□□□□□ -2.26
YPT52YKR014C YBR013CP38215 129 aa0.94□□□□□ -2.26
YPT52YKR014C VMA7P39111 118 aa0.94□□□□□ -2.26
YPT52YKR014C MVB12P42939 101 aa0.94□□□□□ -2.26
YPT52YKR014C RPL22BP56628 122 aaKnown RBP0.94□□□□□ -2.26
YPT52YKR014C AIM11P87275 137 aa0.94□□□□□ -2.26
YPT52YKR014C FCF2Q12035 217 aaPredicted RBP0.94□□□□□ -2.26
YPT52YKR014C YOR376W-AQ3E805 51 aa0.94□□□□□ -2.26
YPT52YKR014C IRA1P18963 3092 aa0.93□□□□□ -2.26
YPT52YKR014C MIC27P50945 234 aa0.93□□□□□ -2.26
YPT52YKR014C HPA2Q06592 156 aa0.93□□□□□ -2.26
YPT52YKR014C YLR099W-AQ3E798 87 aa0.93□□□□□ -2.26
YPT52YKR014C HUG1Q6Q5K6 68 aa0.93□□□□□ -2.26
YPT52YKR014C YDR034W-BQ6Q5X2 51 aa0.93□□□□□ -2.26
YPT52YKR014C SRX1P36077 127 aa0.92□□□□□ -2.26
YPT52YKR014C GPI19Q04082 140 aa0.92□□□□□ -2.26
YPT52YKR014C FRQ1Q06389 190 aa0.92□□□□□ -2.26
YPT52YKR014C YJL197C-AP0C5P0 93 aa0.91□□□□□ -2.26
YPT52YKR014C DYN1P36022 4092 aa0.91□□□□□ -2.26
YPT52YKR014C TAO3P40468 2376 aa0.9□□□□□ -2.27
YPT52YKR014C RPL43AP0CX25 92 aaKnown RBP0.9□□□□□ -2.27
YPT52YKR014C RPL43BP0CX26 92 aa0.9□□□□□ -2.27
YPT52YKR014C SNF11P38956 169 aa0.9□□□□□ -2.27
YPT52YKR014C YIL163CP40448 117 aa0.9□□□□□ -2.27
YPT52YKR014C SPC24Q04477 213 aa0.9□□□□□ -2.27
YPT52YKR014C YLR194CQ05777 254 aa0.9□□□□□ -2.27
YPT52YKR014C OCA6Q12454 224 aa0.9□□□□□ -2.27
YPT52YKR014C MRPL31P14063 131 aaPredicted RBP0.89□□□□□ -2.27
YPT52YKR014C RPB11P38902 120 aa0.89□□□□□ -2.27
YPT52YKR014C NHP10Q03435 203 aa0.89□□□□□ -2.27
YPT52YKR014C SWC7Q06707 132 aa0.89□□□□□ -2.27
YPT52YKR014C WIP1Q2V2P8 89 aa0.89□□□□□ -2.27
YPT52YKR014C STT4P37297 1900 aa0.89□□□□□ -2.27
YPT52YKR014C YPR117WQ06116 2489 aa0.89□□□□□ -2.27
YPT52YKR014C YCR099CP25657 155 aa0.88□□□□□ -2.27
YPT52YKR014C SMX2P40204 77 aaKnown RBP0.88□□□□□ -2.27
YPT52YKR014C YFR035CP43608 114 aa0.88□□□□□ -2.27
YPT52YKR014C APS2Q00381 147 aa0.88□□□□□ -2.27
YPT52YKR014C CUP1-1P0CX80 61 aa0.87□□□□□ -2.27
YPT52YKR014C CUP1-2P0CX81 61 aa0.87□□□□□ -2.27
YPT52YKR014C TDA2P40045 126 aa0.87□□□□□ -2.27
YPT52YKR014C YIL086CP40503 102 aa0.87□□□□□ -2.27
YPT52YKR014C ICS3P47034 131 aa0.87□□□□□ -2.27
YPT52YKR014C YIL014C-AQ02598 104 aa0.87□□□□□ -2.27
YPT52YKR014C YOR097CQ12274 175 aaPredicted RBP0.87□□□□□ -2.27
YPT52YKR014C YOR034C-AQ3E735 80 aa0.87□□□□□ -2.27
YPT52YKR014C OST5Q92316 86 aa0.87□□□□□ -2.27
YPT52YKR014C CSF1Q12150 2958 aa0.87□□□□□ -2.27
YPT52YKR014C EMP24P32803 203 aaKnown RBP0.86□□□□□ -2.27
YPT52YKR014C RPS12P48589 143 aaKnown RBP0.86□□□□□ -2.27
YPT52YKR014C YPL261CQ08976 102 aa0.86□□□□□ -2.27
YPT52YKR014C YIR021W-AQ3E739 70 aa0.86□□□□□ -2.27
YPT52YKR014C YGR240C-AQ3E786 66 aa0.86□□□□□ -2.27
YPT52YKR014C YIL046W-AQ3E7Z4 54 aa0.86□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms