RNA–Protein interactions for RNA: YKR001C

VPS1, Transcript of Dynamin-like GTPase required for vacuolar sorting, yeastyeast

Gene VPS1, Length 2,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS1YKR001C RPB9P27999 122 aa4.34□□□□□ -1.71
VPS1YKR001C YOR186WQ08560 144 aa4.34□□□□□ -1.71
VPS1YKR001C YKR045CP36138 183 aa4.33□□□□□ -1.72
VPS1YKR001C YAL064WP39711 94 aa4.33□□□□□ -1.72
VPS1YKR001C FSH2Q05015 223 aa4.33□□□□□ -1.72
VPS1YKR001C PAU1P0CE88 120 aa4.33□□□□□ -1.72
VPS1YKR001C PAU14P0CE89 120 aa4.33□□□□□ -1.72
VPS1YKR001C PAU6P0CE90 120 aa4.33□□□□□ -1.72
VPS1YKR001C PAU18P0CE91 120 aa4.33□□□□□ -1.72
VPS1YKR001C PAU8P0CE92 120 aa4.33□□□□□ -1.72
VPS1YKR001C PAU11P0CE93 120 aa4.33□□□□□ -1.72
VPS1YKR001C MRPL31P14063 131 aaPredicted RBP4.33□□□□□ -1.72
VPS1YKR001C PAU13P38725 120 aa4.33□□□□□ -1.72
VPS1YKR001C ANS1P38832 159 aa4.33□□□□□ -1.72
VPS1YKR001C TDA2P40045 126 aa4.33□□□□□ -1.72
VPS1YKR001C PAU4P53427 120 aa4.33□□□□□ -1.72
VPS1YKR001C PAU10Q03050 120 aa4.33□□□□□ -1.72
VPS1YKR001C ICY1Q04329 127 aa4.33□□□□□ -1.72
VPS1YKR001C PAU20Q08322 120 aa4.33□□□□□ -1.72
VPS1YKR001C YOR268CQ08734 132 aa4.33□□□□□ -1.72
VPS1YKR001C PAU9Q3E770 120 aa4.33□□□□□ -1.72
VPS1YKR001C TDA8Q6B2U8 126 aa4.33□□□□□ -1.72
VPS1YKR001C DDR48P18899 430 aaKnown RBP4.32□□□□□ -1.72
VPS1YKR001C YEL045CP32616 141 aa4.32□□□□□ -1.72
VPS1YKR001C YNL200CP40165 246 aaKnown RBP4.32□□□□□ -1.72
VPS1YKR001C FUN19P28003 413 aaPredicted RBP4.31□□□□□ -1.72
VPS1YKR001C YKL044WP36092 106 aa4.31□□□□□ -1.72
VPS1YKR001C MIX17Q03667 156 aa4.31□□□□□ -1.72
VPS1YKR001C YER187WP40102 141 aa4.31□□□□□ -1.72
VPS1YKR001C SPG1P50088 95 aa4.31□□□□□ -1.72
VPS1YKR001C SWT21P53873 357 aaPredicted RBP4.31□□□□□ -1.72
VPS1YKR001C MET31Q03081 177 aa4.31□□□□□ -1.72
VPS1YKR001C BPH1P25356 2167 aa4.31□□□□□ -1.72
VPS1YKR001C PAU24P38155 120 aa4.3□□□□□ -1.72
VPS1YKR001C ICS3P47034 131 aa4.3□□□□□ -1.72
VPS1YKR001C Q0297Q9ZZV8 51 aa4.3□□□□□ -1.72
VPS1YKR001C YBL059WP34224 193 aa4.3□□□□□ -1.72
VPS1YKR001C BRP1P53194 125 aa4.3□□□□□ -1.72
VPS1YKR001C YMR295CQ03559 197 aa4.3□□□□□ -1.72
VPS1YKR001C YDR102CQ03864 110 aa4.3□□□□□ -1.72
VPS1YKR001C LPP1Q04396 274 aa4.3□□□□□ -1.72
VPS1YKR001C RPS22BQ3E7Y3 130 aaKnown RBP4.3□□□□□ -1.72
VPS1YKR001C YHR214C-DP0CX93 97 aa4.29□□□□□ -1.72
VPS1YKR001C TIM12P32830 109 aa4.29□□□□□ -1.72
VPS1YKR001C RSM18P40033 138 aa4.29□□□□□ -1.72
VPS1YKR001C YER135CP40082 130 aa4.29□□□□□ -1.72
VPS1YKR001C HUR1P45820 110 aa4.29□□□□□ -1.72
VPS1YKR001C MIM1Q08176 113 aa4.29□□□□□ -1.72
VPS1YKR001C SMT3Q12306 101 aaKnown RBP4.29□□□□□ -1.72
VPS1YKR001C PCL9Q12477 304 aa4.29□□□□□ -1.72
VPS1YKR001C YFR032C-BQ8TGU2 87 aa4.29□□□□□ -1.72
VPS1YKR001C SOD1P00445 154 aaKnown RBP4.28□□□□□ -1.72
VPS1YKR001C RPS8AP0CX39 200 aaKnown RBP4.28□□□□□ -1.72
VPS1YKR001C RPS8BP0CX40 200 aaKnown RBP4.28□□□□□ -1.72
VPS1YKR001C FPR2P32472 135 aa4.28□□□□□ -1.72
VPS1YKR001C HSP150P32478 413 aa4.28□□□□□ -1.72
VPS1YKR001C YER175W-AQ8TGU4 54 aa4.28□□□□□ -1.72
VPS1YKR001C AGA2P32781 87 aa4.28□□□□□ -1.72
VPS1YKR001C RPL42AP0CX27 106 aaKnown RBP4.27□□□□□ -1.73
VPS1YKR001C RPL42BP0CX28 106 aaKnown RBP4.27□□□□□ -1.73
VPS1YKR001C SIM1P40472 476 aa4.27□□□□□ -1.73
VPS1YKR001C REE1P40893 198 aa4.27□□□□□ -1.73
VPS1YKR001C PCP1P53259 346 aa4.27□□□□□ -1.73
VPS1YKR001C YDR274CP87283 123 aa4.27□□□□□ -1.73
VPS1YKR001C YIL014C-AQ02598 104 aa4.27□□□□□ -1.73
VPS1YKR001C BSC1Q12140 328 aa4.27□□□□□ -1.73
VPS1YKR001C YHL037CP38733 133 aa4.27□□□□□ -1.73
VPS1YKR001C YGL118CP53132 145 aa4.27□□□□□ -1.73
VPS1YKR001C PAU12P53343 120 aa4.27□□□□□ -1.73
VPS1YKR001C YMR181CQ03231 154 aa4.27□□□□□ -1.73
VPS1YKR001C PAU2P32612 120 aa4.26□□□□□ -1.73
VPS1YKR001C YKR073CP36153 106 aa4.26□□□□□ -1.73
VPS1YKR001C LST8P41318 303 aa4.26□□□□□ -1.73
VPS1YKR001C YPR096CO13587 100 aa4.25□□□□□ -1.73
VPS1YKR001C MRPL27P36526 146 aaPredicted RBP4.25□□□□□ -1.73
VPS1YKR001C PET8P38921 284 aa4.25□□□□□ -1.73
VPS1YKR001C IGO1P53897 168 aa4.25□□□□□ -1.73
VPS1YKR001C NCE101Q02820 53 aa4.25□□□□□ -1.73
VPS1YKR001C API2Q04413 109 aa4.25□□□□□ -1.73
VPS1YKR001C YOL014WQ08110 124 aa4.25□□□□□ -1.73
VPS1YKR001C PBA1Q05778 276 aa4.25□□□□□ -1.73
VPS1YKR001C HHF1P02309 103 aaKnown RBP4.24□□□□□ -1.73
VPS1YKR001C YSY6P38374 65 aa4.24□□□□□ -1.73
VPS1YKR001C YHR180WP38868 163 aa4.24□□□□□ -1.73
VPS1YKR001C YHP1Q04116 353 aa4.24□□□□□ -1.73
VPS1YKR001C YDL242WQ07746 117 aa4.24□□□□□ -1.73
VPS1YKR001C YPL261CQ08976 102 aa4.24□□□□□ -1.73
VPS1YKR001C DYN1P36022 4092 aa4.24□□□□□ -1.73
VPS1YKR001C URA2P07259 2214 aaKnown RBP4.24□□□□□ -1.73
VPS1YKR001C RPL26AP05743 127 aaKnown RBP4.24□□□□□ -1.73
VPS1YKR001C PIS1P06197 220 aaKnown RBP4.24□□□□□ -1.73
VPS1YKR001C TMC1Q08422 150 aaPredicted RBP4.24□□□□□ -1.73
VPS1YKR001C FYV5P25585 152 aa4.23□□□□□ -1.73
VPS1YKR001C DSE2P38844 325 aa4.23□□□□□ -1.73
VPS1YKR001C YFL051CP43552 160 aa4.23□□□□□ -1.73
VPS1YKR001C YGR045CP53229 120 aa4.23□□□□□ -1.73
VPS1YKR001C YMR316C-AI2HB70 103 aa4.22□□□□□ -1.73
VPS1YKR001C ROX3P25046 220 aa4.22□□□□□ -1.73
VPS1YKR001C MET32Q12041 191 aa4.22□□□□□ -1.73
VPS1YKR001C PFY1P07274 126 aa4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms