RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A RPS22BQ3E7Y3 130 aaKnown RBP1.33□□□□□ -2.2
SFT1YKL006C-A RRT15Q3E811 62 aa1.33□□□□□ -2.2
SFT1YKL006C-A RSF2P46974 1380 aa1.33□□□□□ -2.2
SFT1YKL006C-A HUA1P40325 198 aa1.32□□□□□ -2.2
SFT1YKL006C-A YMR007WQ03675 126 aa1.32□□□□□ -2.2
SFT1YKL006C-A BPT1P14772 1559 aa1.32□□□□□ -2.2
SFT1YKL006C-A BNI1P41832 1953 aa1.31□□□□□ -2.2
SFT1YKL006C-A MRPL31P14063 131 aaPredicted RBP1.31□□□□□ -2.2
SFT1YKL006C-A SRB6P32570 121 aa1.31□□□□□ -2.2
SFT1YKL006C-A MSL1P40567 111 aaPredicted RBP1.31□□□□□ -2.2
SFT1YKL006C-A MVB12P42939 101 aa1.31□□□□□ -2.2
SFT1YKL006C-A PAU5P43575 122 aa1.31□□□□□ -2.2
SFT1YKL006C-A YDR029WQ12111 104 aa1.31□□□□□ -2.2
SFT1YKL006C-A YCL048W-AQ2V2Q2 79 aa1.31□□□□□ -2.2
SFT1YKL006C-A ESC1Q03661 1658 aaKnown RBP1.31□□□□□ -2.2
SFT1YKL006C-A URB1P34241 1764 aaKnown RBP1.31□□□□□ -2.2
SFT1YKL006C-A YGL194C-AQ2V2P6 80 aa1.3□□□□□ -2.2
SFT1YKL006C-A HUG1Q6Q5K6 68 aa1.3□□□□□ -2.2
SFT1YKL006C-A HMRA1P0CY11 126 aa1.29□□□□□ -2.2
SFT1YKL006C-A ROX3P25046 220 aa1.29□□□□□ -2.2
SFT1YKL006C-A HHY1P39982 102 aa1.29□□□□□ -2.2
SFT1YKL006C-A YOL118CQ08259 102 aa1.29□□□□□ -2.2
SFT1YKL006C-A YCR095W-AQ3E787 52 aa1.29□□□□□ -2.2
SFT1YKL006C-A YHL005CP38752 130 aa1.28□□□□□ -2.2
SFT1YKL006C-A IMP2P46972 177 aa1.28□□□□□ -2.2
SFT1YKL006C-A SCP1Q08873 200 aa1.28□□□□□ -2.2
SFT1YKL006C-A MYO1P08964 1928 aa1.28□□□□□ -2.2
SFT1YKL006C-A SWR1Q05471 1514 aa1.27□□□□□ -2.21
SFT1YKL006C-A CCW14O13547 238 aa1.27□□□□□ -2.21
SFT1YKL006C-A GCV3P39726 170 aaPredicted RBP1.27□□□□□ -2.21
SFT1YKL006C-A SNU13P39990 126 aaKnown RBP1.27□□□□□ -2.21
SFT1YKL006C-A LCL1Q02786 101 aa1.27□□□□□ -2.21
SFT1YKL006C-A YDR210WQ03482 75 aa1.26□□□□□ -2.21
SFT1YKL006C-A PAU6P0CE90 120 aa1.25□□□□□ -2.21
SFT1YKL006C-A PAU18P0CE91 120 aa1.25□□□□□ -2.21
SFT1YKL006C-A SNA2P56508 79 aa1.25□□□□□ -2.21
SFT1YKL006C-A YMR082CQ04276 118 aa1.25□□□□□ -2.21
SFT1YKL006C-A YPL038W-AQ3E7B4 63 aa1.25□□□□□ -2.21
SFT1YKL006C-A YHR213W-BQ8TGK1 99 aa1.25□□□□□ -2.21
SFT1YKL006C-A NTE1Q04958 1679 aa1.25□□□□□ -2.21
SFT1YKL006C-A LTE1P07866 1435 aa1.24□□□□□ -2.21
SFT1YKL006C-A ECM12O13529 151 aa1.24□□□□□ -2.21
SFT1YKL006C-A YLR255CO13574 117 aa1.24□□□□□ -2.21
SFT1YKL006C-A YBL071CP38185 102 aa1.24□□□□□ -2.21
SFT1YKL006C-A YMR141CP40211 102 aa1.24□□□□□ -2.21
SFT1YKL006C-A YDR042CQ03205 200 aa1.24□□□□□ -2.21
SFT1YKL006C-A SUS1Q6WNK7 96 aa1.24□□□□□ -2.21
SFT1YKL006C-A YSP2Q06681 1438 aa1.23□□□□□ -2.21
SFT1YKL006C-A RSM18P40033 138 aa1.23□□□□□ -2.21
SFT1YKL006C-A RPL37AP49166 88 aaKnown RBP1.23□□□□□ -2.21
SFT1YKL006C-A NHP10Q03435 203 aa1.23□□□□□ -2.21
SFT1YKL006C-A GDB1Q06625 1536 aa1.23□□□□□ -2.21
SFT1YKL006C-A YRF1-1P0CX20 1796 aa1.23□□□□□ -2.21
SFT1YKL006C-A YRF1-5P0CX21 1796 aa1.23□□□□□ -2.21
SFT1YKL006C-A YRF1-8P0CX22 1796 aa1.23□□□□□ -2.21
SFT1YKL006C-A SRB8P25648 1427 aa1.23□□□□□ -2.21
SFT1YKL006C-A SEC7P11075 2009 aaKnown RBP1.22□□□□□ -2.21
SFT1YKL006C-A MRP17P28778 131 aa1.22□□□□□ -2.21
SFT1YKL006C-A YJR128WP47162 119 aa1.22□□□□□ -2.21
SFT1YKL006C-A POL1P13382 1468 aa1.22□□□□□ -2.21
SFT1YKL006C-A HFA1P32874 2273 aa1.22□□□□□ -2.21
SFT1YKL006C-A MRPL38P35996 138 aaPredicted RBP1.21□□□□□ -2.22
SFT1YKL006C-A SPC1P46965 94 aa1.21□□□□□ -2.22
SFT1YKL006C-A ICY1Q04329 127 aa1.21□□□□□ -2.22
SFT1YKL006C-A LAA1P39526 2014 aa1.2□□□□□ -2.22
SFT1YKL006C-A MRX7P53869 86 aa1.2□□□□□ -2.22
SFT1YKL006C-A YNR034W-AQ3E841 98 aa1.2□□□□□ -2.22
SFT1YKL006C-A YIL086CP40503 102 aa1.19□□□□□ -2.22
SFT1YKL006C-A COX12Q01519 83 aa1.19□□□□□ -2.22
SFT1YKL006C-A YOR034C-AQ3E735 80 aa1.18□□□□□ -2.22
SFT1YKL006C-A MHF2Q3E829 80 aa1.18□□□□□ -2.22
SFT1YKL006C-A SEC16P48415 2195 aaKnown RBP1.18□□□□□ -2.22
SFT1YKL006C-A RPL43AP0CX25 92 aaKnown RBP1.17□□□□□ -2.22
SFT1YKL006C-A RPL43BP0CX26 92 aa1.17□□□□□ -2.22
SFT1YKL006C-A NHP2P32495 156 aaPredicted RBP1.17□□□□□ -2.22
SFT1YKL006C-A SHU1P38751 150 aa1.17□□□□□ -2.22
SFT1YKL006C-A PAU1P0CE88 120 aa1.16□□□□□ -2.22
SFT1YKL006C-A PAU14P0CE89 120 aa1.16□□□□□ -2.22
SFT1YKL006C-A PAU8P0CE92 120 aa1.16□□□□□ -2.22
SFT1YKL006C-A PAU11P0CE93 120 aa1.16□□□□□ -2.22
SFT1YKL006C-A PAU13P38725 120 aa1.16□□□□□ -2.22
SFT1YKL006C-A AIM19P40502 157 aa1.16□□□□□ -2.22
SFT1YKL006C-A PAU10Q03050 120 aa1.16□□□□□ -2.22
SFT1YKL006C-A YMR175W-AQ3E766 64 aa1.16□□□□□ -2.22
SFT1YKL006C-A PAU9Q3E770 120 aa1.16□□□□□ -2.22
SFT1YKL006C-A RPS11AP0CX47 156 aaKnown RBP1.15□□□□□ -2.23
SFT1YKL006C-A RPS11BP0CX48 156 aaKnown RBP1.15□□□□□ -2.23
SFT1YKL006C-A MPC2P38857 129 aa1.15□□□□□ -2.23
SFT1YKL006C-A CWP2P43497 92 aa1.15□□□□□ -2.23
SFT1YKL006C-A PAU4P53427 120 aa1.15□□□□□ -2.23
SFT1YKL006C-A PAU20Q08322 120 aa1.15□□□□□ -2.23
SFT1YKL006C-A YKL068W-AQ3E826 78 aa1.15□□□□□ -2.23
SFT1YKL006C-A TY4B-HP0C2J7 1802 aa1.14□□□□□ -2.23
SFT1YKL006C-A TY1B-PR2P0C2J0 1756 aa1.13□□□□□ -2.23
SFT1YKL006C-A YRF1-2P40105 1681 aa1.13□□□□□ -2.23
SFT1YKL006C-A COX19Q3E731 98 aa1.13□□□□□ -2.23
SFT1YKL006C-A AUA1P32450 94 aa1.12□□□□□ -2.23
SFT1YKL006C-A RPA12P32529 125 aaKnown RBP1.12□□□□□ -2.23
SFT1YKL006C-A YBR292CP38357 123 aa1.12□□□□□ -2.23
SFT1YKL006C-A POC4Q12245 148 aaPredicted RBP1.12□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms