RNA–Protein interactions for RNA: YIR043C

YIR043C, Transcript of Possible pseudogene in strain S288C, yeastyeast

Gene YIR043C, Length 693 nt, Biotype pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR043CYIR043C ENV10Q99382 181 aa1.9□□□□□ -2.11
YIR043CYIR043C YSP2Q06681 1438 aa1.9□□□□□ -2.11
YIR043CYIR043C TY1B-PR2P0C2J0 1756 aa1.9□□□□□ -2.11
YIR043CYIR043C TY3B-IQ7LHG5 1498 aaKnown RBP1.89□□□□□ -2.11
YIR043CYIR043C PAU24P38155 120 aa1.89□□□□□ -2.11
YIR043CYIR043C MSL1P40567 111 aaPredicted RBP1.89□□□□□ -2.11
YIR043CYIR043C RRT15Q3E811 62 aa1.89□□□□□ -2.11
YIR043CYIR043C PDR10P51533 1564 aa1.89□□□□□ -2.11
YIR043CYIR043C ECM12O13529 151 aa1.88□□□□□ -2.11
YIR043CYIR043C SRB6P32570 121 aa1.88□□□□□ -2.11
YIR043CYIR043C SNN1P48232 102 aa1.88□□□□□ -2.11
YIR043CYIR043C MIX14Q04341 121 aa1.88□□□□□ -2.11
YIR043CYIR043C YLR285C-AQ3E771 56 aa1.88□□□□□ -2.11
YIR043CYIR043C PAU19P0CE85 124 aa1.87□□□□□ -2.11
YIR043CYIR043C PAU3P25610 124 aa1.87□□□□□ -2.11
YIR043CYIR043C CYB5P40312 120 aa1.87□□□□□ -2.11
YIR043CYIR043C VMA21P41806 77 aa1.87□□□□□ -2.11
YIR043CYIR043C RSM19P53733 91 aaPredicted RBP1.87□□□□□ -2.11
YIR043CYIR043C MYO1P08964 1928 aa1.87□□□□□ -2.11
YIR043CYIR043C PAU16P35994 123 aa1.86□□□□□ -2.11
YIR043CYIR043C PAU15P40585 124 aa1.86□□□□□ -2.11
YIR043CYIR043C YGL041C-BQ3E750 60 aa1.86□□□□□ -2.11
YIR043CYIR043C YGR240C-AQ3E786 66 aa1.86□□□□□ -2.11
YIR043CYIR043C CWP2P43497 92 aa1.85□□□□□ -2.11
YIR043CYIR043C YHR138CP38841 114 aaPredicted RBP1.84□□□□□ -2.11
YIR043CYIR043C YDR042CQ03205 200 aa1.84□□□□□ -2.11
YIR043CYIR043C YLR363W-AQ3E747 85 aa1.84□□□□□ -2.11
YIR043CYIR043C TY1B-BRQ12193 1756 aa1.84□□□□□ -2.12
YIR043CYIR043C YOR034C-AQ3E735 80 aa1.83□□□□□ -2.12
YIR043CYIR043C DNA2P38859 1522 aa1.82□□□□□ -2.12
YIR043CYIR043C YMR321CQ04898 105 aa1.82□□□□□ -2.12
YIR043CYIR043C SUS1Q6WNK7 96 aa1.82□□□□□ -2.12
YIR043CYIR043C LSM2P38203 95 aaKnown RBP1.81□□□□□ -2.12
YIR043CYIR043C GCV3P39726 170 aaPredicted RBP1.81□□□□□ -2.12
YIR043CYIR043C PAU5P43575 122 aa1.81□□□□□ -2.12
YIR043CYIR043C YPK9Q12697 1472 aa1.81□□□□□ -2.12
YIR043CYIR043C RPA190P10964 1664 aaKnown RBP1.8□□□□□ -2.12
YIR043CYIR043C RPL43AP0CX25 92 aaKnown RBP1.8□□□□□ -2.12
YIR043CYIR043C RPL43BP0CX26 92 aa1.8□□□□□ -2.12
YIR043CYIR043C HMRA2P0CY13 119 aa1.8□□□□□ -2.12
YIR043CYIR043C YCR085WP25650 117 aa1.8□□□□□ -2.12
YIR043CYIR043C YHL005CP38752 130 aa1.8□□□□□ -2.12
YIR043CYIR043C YMR175W-AQ3E766 64 aa1.8□□□□□ -2.12
YIR043CYIR043C RSM18P40033 138 aa1.79□□□□□ -2.12
YIR043CYIR043C ICY1Q04329 127 aa1.79□□□□□ -2.12
YIR043CYIR043C POC4Q12245 148 aaPredicted RBP1.79□□□□□ -2.12
YIR043CYIR043C YHR213W-AQ8TGT4 77 aa1.79□□□□□ -2.12
YIR043CYIR043C YJR128WP47162 119 aa1.78□□□□□ -2.12
YIR043CYIR043C TY1B-DR1Q03855 1755 aa1.77□□□□□ -2.13
YIR043CYIR043C TY1B-DR3Q99231 1755 aa1.77□□□□□ -2.13
YIR043CYIR043C YLR419WQ06698 1435 aaKnown RBP1.77□□□□□ -2.13
YIR043CYIR043C IMP2P46972 177 aa1.77□□□□□ -2.13
YIR043CYIR043C MRPS12P53732 153 aa1.77□□□□□ -2.13
YIR043CYIR043C ROX3P25046 220 aa1.76□□□□□ -2.13
YIR043CYIR043C RPA12P32529 125 aaKnown RBP1.76□□□□□ -2.13
YIR043CYIR043C VPS55P47111 140 aa1.76□□□□□ -2.13
YIR043CYIR043C LCL1Q02786 101 aa1.76□□□□□ -2.13
YIR043CYIR043C TY1B-NL2Q99337 1749 aaKnown RBP1.76□□□□□ -2.13
YIR043CYIR043C YRF1-2P40105 1681 aa1.75□□□□□ -2.13
YIR043CYIR043C LSM6Q06406 86 aaKnown RBP1.75□□□□□ -2.13
YIR043CYIR043C SWR1Q05471 1514 aa1.75□□□□□ -2.13
YIR043CYIR043C GDB1Q06625 1536 aa1.75□□□□□ -2.13
YIR043CYIR043C URA2P07259 2214 aaKnown RBP1.74□□□□□ -2.13
YIR043CYIR043C NHP2P32495 156 aaPredicted RBP1.74□□□□□ -2.13
YIR043CYIR043C YCR095W-AQ3E787 52 aa1.74□□□□□ -2.13
YIR043CYIR043C YLR307C-AQ3E825 87 aa1.74□□□□□ -2.13
YIR043CYIR043C PAI3P01094 68 aa1.73□□□□□ -2.13
YIR043CYIR043C YOL118CQ08259 102 aa1.73□□□□□ -2.13
YIR043CYIR043C MLP1Q02455 1875 aaKnown RBP1.72□□□□□ -2.13
YIR043CYIR043C TOM6P33448 61 aa1.72□□□□□ -2.13
YIR043CYIR043C MRPL38P35996 138 aaPredicted RBP1.72□□□□□ -2.13
YIR043CYIR043C SPC1P46965 94 aa1.72□□□□□ -2.13
YIR043CYIR043C YCL048W-AQ2V2Q2 79 aa1.72□□□□□ -2.13
YIR043CYIR043C MHF2Q3E829 80 aa1.72□□□□□ -2.13
YIR043CYIR043C SEC16P48415 2195 aaKnown RBP1.71□□□□□ -2.14
YIR043CYIR043C RPO31P04051 1460 aa1.71□□□□□ -2.14
YIR043CYIR043C POL1P13382 1468 aa1.71□□□□□ -2.14
YIR043CYIR043C NUP159P40477 1460 aa1.71□□□□□ -2.14
YIR043CYIR043C PAU6P0CE90 120 aa1.71□□□□□ -2.14
YIR043CYIR043C PAU18P0CE91 120 aa1.71□□□□□ -2.14
YIR043CYIR043C YLR157W-EP0CF00 54 aa1.71□□□□□ -2.14
YIR043CYIR043C MRP17P28778 131 aa1.71□□□□□ -2.14
YIR043CYIR043C YPR145C-AQ2V2P0 78 aa1.71□□□□□ -2.14
YIR043CYIR043C YDR119W-AQ2V2P9 66 aa1.71□□□□□ -2.14
YIR043CYIR043C YFR010W-AP0C5N0 62 aa1.7□□□□□ -2.14
YIR043CYIR043C SNA2P56508 79 aa1.7□□□□□ -2.14
YIR043CYIR043C URB1P34241 1764 aaKnown RBP1.69□□□□□ -2.14
YIR043CYIR043C CCW14O13547 238 aa1.68□□□□□ -2.14
YIR043CYIR043C YBL071CP38185 102 aa1.68□□□□□ -2.14
YIR043CYIR043C YDR381C-AQ3E6R5 114 aa1.68□□□□□ -2.14
YIR043CYIR043C BPT1P14772 1559 aa1.68□□□□□ -2.14
YIR043CYIR043C ESP1Q03018 1630 aa1.67□□□□□ -2.14
YIR043CYIR043C YOR343CQ12484 108 aa1.67□□□□□ -2.14
YIR043CYIR043C ATX1P38636 73 aa1.66□□□□□ -2.14
YIR043CYIR043C YDR210WQ03482 75 aa1.66□□□□□ -2.14
YIR043CYIR043C SIN3P22579 1536 aa1.66□□□□□ -2.14
YIR043CYIR043C BRR2P32639 2163 aaKnown RBP1.65□□□□□ -2.14
YIR043CYIR043C FAS2P19097 1887 aaKnown RBP1.65□□□□□ -2.14
YIR043CYIR043C TY1B-GR3Q12316 1755 aa1.65□□□□□ -2.14
YIR043CYIR043C TY1B-ORQ92393 1755 aa1.65□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 7.2 ms