RNA–Protein interactions for RNA: YGR171C

MSM1, Transcript of Mitochondrial methionyl-tRNA synthetase (MetRS), yeastyeast

Gene MSM1, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSM1YGR171C IRC20Q06554 1556 aa2.19□□□□□ -2.06
MSM1YGR171C PAU21P0CE86 164 aa2.19□□□□□ -2.06
MSM1YGR171C PAU22P0CE87 164 aa2.19□□□□□ -2.06
MSM1YGR171C TOM6P33448 61 aa2.19□□□□□ -2.06
MSM1YGR171C YER187WP40102 141 aa2.19□□□□□ -2.06
MSM1YGR171C YNL198CP40166 100 aa2.19□□□□□ -2.06
MSM1YGR171C IGO1P53897 168 aa2.19□□□□□ -2.06
MSM1YGR171C FIT2Q08906 153 aa2.19□□□□□ -2.06
MSM1YGR171C PDR12Q02785 1511 aa2.19□□□□□ -2.06
MSM1YGR171C ESP1Q03018 1630 aa2.19□□□□□ -2.06
MSM1YGR171C ULS1Q08562 1619 aa2.18□□□□□ -2.06
MSM1YGR171C YHR213WP0CI67 198 aa2.18□□□□□ -2.06
MSM1YGR171C ATG8P38182 117 aaRIP-Chip data2.18□□□□□ -2.06not detected
MSM1YGR171C RGM1Q00453 211 aa2.18□□□□□ -2.06
MSM1YGR171C AVO2Q04749 426 aa2.18□□□□□ -2.06
MSM1YGR171C RPL22AP05749 121 aaKnown RBP2.17□□□□□ -2.06
MSM1YGR171C YEL014CP39999 101 aa2.17□□□□□ -2.06
MSM1YGR171C YPR145C-AQ2V2P0 78 aa2.17□□□□□ -2.06
MSM1YGR171C VMA9Q3E7B6 73 aa2.17□□□□□ -2.06
MSM1YGR171C SPT6P23615 1451 aaKnown RBP2.17□□□□□ -2.06
MSM1YGR171C FAS1P07149 2051 aaKnown RBP2.17□□□□□ -2.06
MSM1YGR171C PEP1P32319 1579 aa2.17□□□□□ -2.06
MSM1YGR171C YBR292CP38357 123 aa2.17□□□□□ -2.06
MSM1YGR171C ICY1Q04329 127 aa2.17□□□□□ -2.06
MSM1YGR171C YPL261CQ08976 102 aa2.17□□□□□ -2.06
MSM1YGR171C BNI1P41832 1953 aa2.16□□□□□ -2.06
MSM1YGR171C RPL40AP0CH08 128 aaKnown RBP2.16□□□□□ -2.06
MSM1YGR171C RPL40BP0CH09 128 aaKnown RBP2.16□□□□□ -2.06
MSM1YGR171C PAU2P32612 120 aa2.16□□□□□ -2.06
MSM1YGR171C RPB7P34087 171 aa2.16□□□□□ -2.06
MSM1YGR171C GCV3P39726 170 aaPredicted RBP2.16□□□□□ -2.06
MSM1YGR171C RSM18P40033 138 aa2.16□□□□□ -2.06
MSM1YGR171C DCV1P43595 202 aa2.16□□□□□ -2.06
MSM1YGR171C BRP1P53194 125 aa2.16□□□□□ -2.06
MSM1YGR171C PAU12P53343 120 aa2.16□□□□□ -2.06
MSM1YGR171C RPO21P04050 1733 aaKnown RBP2.16□□□□□ -2.06
MSM1YGR171C DOP1Q03921 1698 aa2.15□□□□□ -2.06
MSM1YGR171C SEC7P11075 2009 aaKnown RBP2.15□□□□□ -2.06
MSM1YGR171C YGL149WP53116 101 aa2.15□□□□□ -2.07
MSM1YGR171C RPL22BP56628 122 aaKnown RBP2.15□□□□□ -2.07
MSM1YGR171C PDR5P33302 1511 aaKnown RBP2.15□□□□□ -2.07
MSM1YGR171C VTH1P40438 1549 aa2.15□□□□□ -2.07
MSM1YGR171C VTH2P40890 1549 aa2.15□□□□□ -2.07
MSM1YGR171C GDB1Q06625 1536 aa2.15□□□□□ -2.07
MSM1YGR171C YLR419WQ06698 1435 aaKnown RBP2.15□□□□□ -2.07
MSM1YGR171C RPA190P10964 1664 aaKnown RBP2.15□□□□□ -2.07
MSM1YGR171C PAU19P0CE85 124 aa2.14□□□□□ -2.07
MSM1YGR171C PAU3P25610 124 aa2.14□□□□□ -2.07
MSM1YGR171C YHL005CP38752 130 aa2.14□□□□□ -2.07
MSM1YGR171C ICS3P47034 131 aa2.14□□□□□ -2.07
MSM1YGR171C MIC27P50945 234 aa2.14□□□□□ -2.07
MSM1YGR171C YFL041W-AQ3E817 63 aa2.14□□□□□ -2.07
MSM1YGR171C OST5Q92316 86 aa2.14□□□□□ -2.07
MSM1YGR171C FLO9P39712 1322 aa2.14□□□□□ -2.07
MSM1YGR171C PAU24P38155 120 aa2.14□□□□□ -2.07
MSM1YGR171C YDR381C-AQ3E6R5 114 aa2.14□□□□□ -2.07
MSM1YGR171C UTP10P42945 1769 aaKnown RBP2.13□□□□□ -2.07
MSM1YGR171C MRP17P28778 131 aa2.13□□□□□ -2.07
MSM1YGR171C YIL102C-AQ2V2P5 75 aa2.13□□□□□ -2.07
MSM1YGR171C DNF1P32660 1571 aa2.12□□□□□ -2.07
MSM1YGR171C RPL36BO14455 100 aaKnown RBP2.12□□□□□ -2.07
MSM1YGR171C RPL36AP05745 100 aaPredicted RBP2.12□□□□□ -2.07
MSM1YGR171C NHP2P32495 156 aaPredicted RBP2.12□□□□□ -2.07
MSM1YGR171C PAU16P35994 123 aa2.12□□□□□ -2.07
MSM1YGR171C PAU15P40585 124 aa2.12□□□□□ -2.07
MSM1YGR171C YPL038W-AQ3E7B4 63 aa2.12□□□□□ -2.07
MSM1YGR171C BCK1Q01389 1478 aa2.12□□□□□ -2.07
MSM1YGR171C HSP150P32478 413 aa2.11□□□□□ -2.07
MSM1YGR171C SMX2P40204 77 aaKnown RBP2.11□□□□□ -2.07
MSM1YGR171C IMP2P46972 177 aa2.11□□□□□ -2.07
MSM1YGR171C VAM10Q08474 114 aa2.11□□□□□ -2.07
MSM1YGR171C MHF2Q3E829 80 aa2.11□□□□□ -2.07
MSM1YGR171C UFD4P33202 1483 aa2.11□□□□□ -2.07
MSM1YGR171C YIR020CP40575 100 aa2.11□□□□□ -2.07
MSM1YGR171C YFL051CP43552 160 aa2.11□□□□□ -2.07
MSM1YGR171C PAU5P43575 122 aa2.11□□□□□ -2.07
MSM1YGR171C YOR105WQ08504 108 aa2.11□□□□□ -2.07
MSM1YGR171C PDX3P38075 228 aaKnown RBP2.1□□□□□ -2.07
MSM1YGR171C YIL014C-AQ02598 104 aa2.1□□□□□ -2.07
MSM1YGR171C YOL118CQ08259 102 aa2.1□□□□□ -2.07
MSM1YGR171C YHR086W-AQ3E746 53 aa2.1□□□□□ -2.07
MSM1YGR171C CMC4Q3E7A9 73 aa2.1□□□□□ -2.07
MSM1YGR171C TY3B-GQ99315 1547 aa2.09□□□□□ -2.07
MSM1YGR171C MLP2P40457 1679 aa2.09□□□□□ -2.07
MSM1YGR171C RTC6O14464 93 aa2.09□□□□□ -2.07
MSM1YGR171C PFY1P07274 126 aa2.09□□□□□ -2.07
MSM1YGR171C YHR214C-DP0CX93 97 aa2.09□□□□□ -2.07
MSM1YGR171C LST8P41318 303 aa2.09□□□□□ -2.07
MSM1YGR171C COX12Q01519 83 aa2.09□□□□□ -2.07
MSM1YGR171C LSM6Q06406 86 aaKnown RBP2.09□□□□□ -2.07
MSM1YGR171C CDC25P04821 1589 aa2.09□□□□□ -2.08
MSM1YGR171C RRP5Q05022 1729 aaKnown RBP2.09□□□□□ -2.08
MSM1YGR171C RPS22AP0C0W1 130 aaKnown RBP2.08□□□□□ -2.08
MSM1YGR171C YJL197C-AP0C5P0 93 aa2.08□□□□□ -2.08
MSM1YGR171C ROX3P25046 220 aa2.08□□□□□ -2.08
MSM1YGR171C SPO14P36126 1683 aa2.08□□□□□ -2.08
MSM1YGR171C SRX1P36077 127 aa2.08□□□□□ -2.08
MSM1YGR171C COX23P38824 151 aa2.08□□□□□ -2.08
MSM1YGR171C YLR194CQ05777 254 aa2.08□□□□□ -2.08
MSM1YGR171C HPA2Q06592 156 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 24.7 ms