RNA–Protein interactions for RNA: YGR109W-A

YGR109W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YGR109W-A, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR109W-AYGR109W-A TY1B-DR3Q99231 1755 aa1.11□□□□□ -2.23
YGR109W-AYGR109W-A RPL40AP0CH08 128 aaKnown RBP1.11□□□□□ -2.23
YGR109W-AYGR109W-A RPL40BP0CH09 128 aaKnown RBP1.11□□□□□ -2.23
YGR109W-AYGR109W-A RPA12P32529 125 aaKnown RBP1.11□□□□□ -2.23
YGR109W-AYGR109W-A ATG8P38182 117 aaRIP-Chip data1.11□□□□□ -2.23not detected
YGR109W-AYGR109W-A YHL037CP38733 133 aa1.11□□□□□ -2.23
YGR109W-AYGR109W-A GCV3P39726 170 aaPredicted RBP1.11□□□□□ -2.23
YGR109W-AYGR109W-A CYB5P40312 120 aa1.11□□□□□ -2.23
YGR109W-AYGR109W-A POR2P40478 281 aa1.11□□□□□ -2.23
YGR109W-AYGR109W-A YCL048W-AQ2V2Q2 79 aa1.11□□□□□ -2.23
YGR109W-AYGR109W-A CDC25P04821 1589 aa1.11□□□□□ -2.23
YGR109W-AYGR109W-A IQG1Q12280 1495 aa1.11□□□□□ -2.23
YGR109W-AYGR109W-A NTE1Q04958 1679 aa1.1□□□□□ -2.23
YGR109W-AYGR109W-A SNQ2P32568 1501 aaKnown RBP1.1□□□□□ -2.23
YGR109W-AYGR109W-A SEC7P11075 2009 aaKnown RBP1.1□□□□□ -2.23
YGR109W-AYGR109W-A RKR1Q04781 1562 aa1.1□□□□□ -2.23
YGR109W-AYGR109W-A RPL33AP05744 107 aaKnown RBP1.1□□□□□ -2.23
YGR109W-AYGR109W-A LST8P41318 303 aa1.1□□□□□ -2.23
YGR109W-AYGR109W-A PAU12P53343 120 aa1.1□□□□□ -2.23
YGR109W-AYGR109W-A YDR042CQ03205 200 aa1.1□□□□□ -2.23
YGR109W-AYGR109W-A YMR321CQ04898 105 aa1.1□□□□□ -2.23
YGR109W-AYGR109W-A NUP159P40477 1460 aa1.1□□□□□ -2.23
YGR109W-AYGR109W-A BCK1Q01389 1478 aa1.1□□□□□ -2.23
YGR109W-AYGR109W-A FAS2P19097 1887 aaKnown RBP1.09□□□□□ -2.23
YGR109W-AYGR109W-A ARO1P08566 1588 aaKnown RBP1.09□□□□□ -2.23
YGR109W-AYGR109W-A YGL014C-AP0C5N1 53 aa1.09□□□□□ -2.23
YGR109W-AYGR109W-A PAU19P0CE85 124 aa1.09□□□□□ -2.23
YGR109W-AYGR109W-A PAU3P25610 124 aa1.09□□□□□ -2.23
YGR109W-AYGR109W-A PAU2P32612 120 aa1.09□□□□□ -2.23
YGR109W-AYGR109W-A RSM18P40033 138 aa1.09□□□□□ -2.23
YGR109W-AYGR109W-A IRC21Q04772 201 aa1.09□□□□□ -2.23
YGR109W-AYGR109W-A YLR194CQ05777 254 aa1.09□□□□□ -2.23
YGR109W-AYGR109W-A ENV10Q99382 181 aa1.09□□□□□ -2.23
YGR109W-AYGR109W-A LAA1P39526 2014 aa1.09□□□□□ -2.24
YGR109W-AYGR109W-A VTH1P40438 1549 aa1.09□□□□□ -2.24
YGR109W-AYGR109W-A VTH2P40890 1549 aa1.09□□□□□ -2.24
YGR109W-AYGR109W-A YCR085WP25650 117 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A PAU16P35994 123 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A PAU24P38155 120 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A COX23P38824 151 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A PAU15P40585 124 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A ICS3P47034 131 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A YJL009WP47078 108 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A PAU23Q07987 124 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A YOL118CQ08259 102 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A PAU17Q12370 124 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A YMR175W-AQ3E766 64 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A TY4B-JP47024 1803 aa1.08□□□□□ -2.24
YGR109W-AYGR109W-A ULS1Q08562 1619 aa1.07□□□□□ -2.24
YGR109W-AYGR109W-A PAI3P01094 68 aa1.07□□□□□ -2.24
YGR109W-AYGR109W-A RPL22AP05749 121 aaKnown RBP1.07□□□□□ -2.24
YGR109W-AYGR109W-A TOM6P33448 61 aa1.07□□□□□ -2.24
YGR109W-AYGR109W-A SSS1P35179 80 aa1.07□□□□□ -2.24
YGR109W-AYGR109W-A YFL065CP43539 102 aa1.07□□□□□ -2.24
YGR109W-AYGR109W-A YMR122CQ03879 124 aa1.07□□□□□ -2.24
YGR109W-AYGR109W-A TAR1Q8TGM6 124 aa1.07□□□□□ -2.24
YGR109W-AYGR109W-A ATG2P53855 1592 aa1.07□□□□□ -2.24
YGR109W-AYGR109W-A DOP1Q03921 1698 aa1.07□□□□□ -2.24
YGR109W-AYGR109W-A HAP1P0CE41 1502 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A ECM29P38737 1868 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A KOG1P38873 1557 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A YHR212W-AP0CX91 67 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A ROX3P25046 220 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A YCL042WP25572 119 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A MRP17P28778 131 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A YIL163CP40448 117 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A IMP2P46972 177 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A RPL37AP49166 88 aaKnown RBP1.06□□□□□ -2.24
YGR109W-AYGR109W-A ICY1Q04329 127 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A SEN15Q04675 128 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A COA4Q05809 96 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A LSM6Q06406 86 aaKnown RBP1.06□□□□□ -2.24
YGR109W-AYGR109W-A YGL041C-BQ3E750 60 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A RRT15Q3E811 62 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A HIR3P47171 1648 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A GCN2P15442 1659 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A SPO14P36126 1683 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A USO1P25386 1790 aa1.06□□□□□ -2.24
YGR109W-AYGR109W-A UTP10P42945 1769 aaKnown RBP1.06□□□□□ -2.24
YGR109W-AYGR109W-A CHC1P22137 1653 aaKnown RBP1.05□□□□□ -2.24
YGR109W-AYGR109W-A CCW14O13547 238 aa1.05□□□□□ -2.24
YGR109W-AYGR109W-A YSF3P0C074 85 aaPredicted RBP1.05□□□□□ -2.24
YGR109W-AYGR109W-A YEL008WP40001 126 aa1.05□□□□□ -2.24
YGR109W-AYGR109W-A VPS55P47111 140 aa1.05□□□□□ -2.24
YGR109W-AYGR109W-A PRM3Q08931 133 aa1.05□□□□□ -2.24
YGR109W-AYGR109W-A YKL023C-AQ2V2P3 75 aa1.05□□□□□ -2.24
YGR109W-AYGR109W-A COA3Q3E7B2 85 aa1.05□□□□□ -2.24
YGR109W-AYGR109W-A MHF2Q3E829 80 aa1.05□□□□□ -2.24
YGR109W-AYGR109W-A YOR093CQ12275 1648 aa1.04□□□□□ -2.24
YGR109W-AYGR109W-A RPO21P04050 1733 aaKnown RBP1.04□□□□□ -2.24
YGR109W-AYGR109W-A TY1B-GR3Q12316 1755 aa1.04□□□□□ -2.24
YGR109W-AYGR109W-A TY1B-ORQ92393 1755 aa1.04□□□□□ -2.24
YGR109W-AYGR109W-A CWP2P43497 92 aa1.04□□□□□ -2.24
YGR109W-AYGR109W-A PAU5P43575 122 aa1.04□□□□□ -2.24
YGR109W-AYGR109W-A COX12Q01519 83 aa1.04□□□□□ -2.24
YGR109W-AYGR109W-A YOR072WQ08486 104 aa1.04□□□□□ -2.24
YGR109W-AYGR109W-A YPR203WQ08994 102 aa1.04□□□□□ -2.24
YGR109W-AYGR109W-A POC4Q12245 148 aaPredicted RBP1.04□□□□□ -2.24
YGR109W-AYGR109W-A YOR343CQ12484 108 aa1.04□□□□□ -2.24
YGR109W-AYGR109W-A YCR095W-AQ3E787 52 aa1.04□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms