RNA–Protein interactions for RNA: YGR009C

SEC9, Transcript of t-SNARE protein required for secretory vesicle-plasma membrane fusion, yeastyeast

Gene SEC9, Length 1,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC9YGR009C AIM26P32858 118 aa3.79□□□□□ -1.8
SEC9YGR009C ASK1P35734 292 aa3.79□□□□□ -1.8
SEC9YGR009C YHL005CP38752 130 aa3.79□□□□□ -1.8
SEC9YGR009C IML1P47170 1584 aa3.78□□□□□ -1.8
SEC9YGR009C RRT1P38192 103 aa3.78□□□□□ -1.8
SEC9YGR009C COX14P39103 70 aa3.78□□□□□ -1.8
SEC9YGR009C IMP2P46972 177 aa3.78□□□□□ -1.8
SEC9YGR009C ATP19P81451 68 aa3.78□□□□□ -1.8
SEC9YGR009C SOM1Q05676 74 aa3.78□□□□□ -1.8
SEC9YGR009C MPC3P53311 146 aa3.78□□□□□ -1.8
SEC9YGR009C MET31Q03081 177 aa3.78□□□□□ -1.8
SEC9YGR009C YOR381W-AQ3E804 55 aa3.78□□□□□ -1.8
SEC9YGR009C RPL42AP0CX27 106 aaKnown RBP3.77□□□□□ -1.81
SEC9YGR009C RPL42BP0CX28 106 aaKnown RBP3.77□□□□□ -1.81
SEC9YGR009C YCR043CP25361 127 aa3.77□□□□□ -1.81
SEC9YGR009C SRL1Q08673 210 aa3.77□□□□□ -1.81
SEC9YGR009C URB1P34241 1764 aaKnown RBP3.77□□□□□ -1.81
SEC9YGR009C RIM15P43565 1770 aa3.77□□□□□ -1.81
SEC9YGR009C YHR180WP38868 163 aa3.76□□□□□ -1.81
SEC9YGR009C IRC23Q08416 157 aa3.76□□□□□ -1.81
SEC9YGR009C YLR146W-AQ2V2P1 62 aa3.76□□□□□ -1.81
SEC9YGR009C BUD3P25558 1636 aa3.76□□□□□ -1.81
SEC9YGR009C SOD1P00445 154 aaKnown RBP3.76□□□□□ -1.81
SEC9YGR009C HHF1P02309 103 aaKnown RBP3.76□□□□□ -1.81
SEC9YGR009C YSY6P38374 65 aa3.76□□□□□ -1.81
SEC9YGR009C IRC19Q07843 230 aa3.76□□□□□ -1.81
SEC9YGR009C YOL118CQ08259 102 aa3.76□□□□□ -1.81
SEC9YGR009C VMR1P38735 1592 aa3.75□□□□□ -1.81
SEC9YGR009C ARC15P40518 154 aaRIP-Chip data3.74□□□□□ -1.81not detected
SEC9YGR009C FSH2Q05015 223 aa3.74□□□□□ -1.81
SEC9YGR009C YOR343CQ12484 108 aa3.74□□□□□ -1.81
SEC9YGR009C FKS3Q04952 1785 aa3.74□□□□□ -1.81
SEC9YGR009C LAA1P39526 2014 aa3.74□□□□□ -1.81
SEC9YGR009C PFY1P07274 126 aa3.74□□□□□ -1.81
SEC9YGR009C RPS19BP07281 144 aaPredicted RBP3.74□□□□□ -1.81
SEC9YGR009C ROX3P25046 220 aa3.74□□□□□ -1.81
SEC9YGR009C YBL059WP34224 193 aa3.74□□□□□ -1.81
SEC9YGR009C UTH1P36135 365 aa3.74□□□□□ -1.81
SEC9YGR009C CTR2P38865 189 aa3.74□□□□□ -1.81
SEC9YGR009C PIR3Q03180 325 aa3.74□□□□□ -1.81
SEC9YGR009C OST5Q92316 86 aa3.74□□□□□ -1.81
SEC9YGR009C YHR173CP38864 112 aa3.73□□□□□ -1.81
SEC9YGR009C FLO5P38894 1075 aa3.73□□□□□ -1.81
SEC9YGR009C BRP1P53194 125 aa3.73□□□□□ -1.81
SEC9YGR009C RGM1Q00453 211 aa3.73□□□□□ -1.81
SEC9YGR009C MIX17Q03667 156 aa3.73□□□□□ -1.81
SEC9YGR009C PPT2Q12036 173 aa3.73□□□□□ -1.81
SEC9YGR009C PAU1P0CE88 120 aa3.72□□□□□ -1.81
SEC9YGR009C PAU14P0CE89 120 aa3.72□□□□□ -1.81
SEC9YGR009C PAU6P0CE90 120 aa3.72□□□□□ -1.81
SEC9YGR009C PAU18P0CE91 120 aa3.72□□□□□ -1.81
SEC9YGR009C PAU8P0CE92 120 aa3.72□□□□□ -1.81
SEC9YGR009C PAU11P0CE93 120 aa3.72□□□□□ -1.81
SEC9YGR009C PAU13P38725 120 aa3.72□□□□□ -1.81
SEC9YGR009C PAU4P53427 120 aa3.72□□□□□ -1.81
SEC9YGR009C PAU10Q03050 120 aa3.72□□□□□ -1.81
SEC9YGR009C PAU20Q08322 120 aa3.72□□□□□ -1.81
SEC9YGR009C YOR314WQ12506 109 aa3.72□□□□□ -1.81
SEC9YGR009C PAU9Q3E770 120 aa3.72□□□□□ -1.81
SEC9YGR009C DNF3Q12674 1656 aa3.72□□□□□ -1.81
SEC9YGR009C RPS22AP0C0W1 130 aaKnown RBP3.72□□□□□ -1.81
SEC9YGR009C DSE2P38844 325 aa3.72□□□□□ -1.81
SEC9YGR009C ECO1P43605 281 aa3.72□□□□□ -1.81
SEC9YGR009C YIL014C-AQ02598 104 aa3.72□□□□□ -1.81
SEC9YGR009C RPS22BQ3E7Y3 130 aaKnown RBP3.72□□□□□ -1.81
SEC9YGR009C APC1P53886 1748 aa3.71□□□□□ -1.82
SEC9YGR009C YGL118CP53132 145 aa3.71□□□□□ -1.82
SEC9YGR009C YAL065CO13511 128 aa3.71□□□□□ -1.82
SEC9YGR009C YBR209WP38311 105 aa3.71□□□□□ -1.82
SEC9YGR009C AIM4P38305 123 aaPredicted RBP3.7□□□□□ -1.82
SEC9YGR009C YGL149WP53116 101 aa3.7□□□□□ -1.82
SEC9YGR009C YDR461C-AQ2V2P7 80 aa3.7□□□□□ -1.82
SEC9YGR009C SLH1P53327 1967 aaKnown RBP3.7□□□□□ -1.82
SEC9YGR009C ERI1P62651 68 aaKnown RBP3.69□□□□□ -1.82
SEC9YGR009C YDL241WQ07738 123 aa3.69□□□□□ -1.82
SEC9YGR009C MOT1P32333 1867 aa3.69□□□□□ -1.82
SEC9YGR009C RPR2P40571 144 aa3.69□□□□□ -1.82
SEC9YGR009C YGR121W-AQ3E816 71 aa3.69□□□□□ -1.82
SEC9YGR009C YER188C-AP0C0V2 99 aa3.68□□□□□ -1.82
SEC9YGR009C YIR020CP40575 100 aa3.68□□□□□ -1.82
SEC9YGR009C SED1Q01589 338 aa3.68□□□□□ -1.82
SEC9YGR009C YKL065W-AQ2V2P2 73 aa3.68□□□□□ -1.82
SEC9YGR009C QCR9P22289 66 aa3.67□□□□□ -1.82
SEC9YGR009C YCR022CP25620 114 aa3.67□□□□□ -1.82
SEC9YGR009C YLR162WQ06235 118 aa3.67□□□□□ -1.82
SEC9YGR009C SPI1P40092 148 aa3.67□□□□□ -1.82
SEC9YGR009C TMC1Q08422 150 aaPredicted RBP3.67□□□□□ -1.82
SEC9YGR009C YDR246W-AQ3E763 66 aa3.67□□□□□ -1.82
SEC9YGR009C RPS23AP0CX29 145 aaKnown RBP3.66□□□□□ -1.82
SEC9YGR009C RPS23BP0CX30 145 aa3.66□□□□□ -1.82
SEC9YGR009C DCV1P43595 202 aa3.66□□□□□ -1.82
SEC9YGR009C YML122CQ03207 126 aa3.66□□□□□ -1.82
SEC9YGR009C YMR122CQ03879 124 aa3.66□□□□□ -1.82
SEC9YGR009C BSC1Q12140 328 aa3.66□□□□□ -1.82
SEC9YGR009C PMD1P32634 1753 aa3.66□□□□□ -1.82
SEC9YGR009C AGA2P32781 87 aa3.65□□□□□ -1.82
SEC9YGR009C PTH1P38876 190 aaKnown RBP3.65□□□□□ -1.82
SEC9YGR009C SPC1P46965 94 aa3.65□□□□□ -1.82
SEC9YGR009C GSC2P40989 1895 aa3.65□□□□□ -1.83
SEC9YGR009C SRX1P36077 127 aa3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms