RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeastyeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIF1YGL090W YDL157CQ12082 118 aa2.39□□□□□ -2.03
LIF1YGL090W RPL26AP05743 127 aaKnown RBP2.38□□□□□ -2.03
LIF1YGL090W FUN14P18411 198 aa2.38□□□□□ -2.03
LIF1YGL090W ATG8P38182 117 aaRIP-Chip data2.38□□□□□ -2.03not detected
LIF1YGL090W YHR022CP38763 256 aa2.38□□□□□ -2.03
LIF1YGL090W SVP26P38869 228 aa2.38□□□□□ -2.03
LIF1YGL090W RPL26BP53221 127 aaKnown RBP2.38□□□□□ -2.03
LIF1YGL090W RPL22BP56628 122 aaKnown RBP2.38□□□□□ -2.03
LIF1YGL090W YMR030W-AQ3E760 96 aa2.38□□□□□ -2.03
LIF1YGL090W OST5Q92316 86 aa2.38□□□□□ -2.03
LIF1YGL090W YLR422WQ06409 1932 aa2.38□□□□□ -2.03
LIF1YGL090W TY4B-HP0C2J7 1802 aa2.38□□□□□ -2.03
LIF1YGL090W TY4B-JP47024 1803 aa2.38□□□□□ -2.03
LIF1YGL090W YLR419WQ06698 1435 aaKnown RBP2.37□□□□□ -2.03
LIF1YGL090W TEL1P38110 2787 aa2.37□□□□□ -2.03
LIF1YGL090W SEC11P15367 167 aa2.37□□□□□ -2.03
LIF1YGL090W YCR085WP25650 117 aa2.37□□□□□ -2.03
LIF1YGL090W HYR1P40581 163 aaKnown RBP2.37□□□□□ -2.03
LIF1YGL090W YFL012WP43580 148 aa2.37□□□□□ -2.03
LIF1YGL090W DCV1P43595 202 aa2.37□□□□□ -2.03
LIF1YGL090W CIS3P47001 227 aa2.37□□□□□ -2.03
LIF1YGL090W YDR114CQ04597 100 aa2.37□□□□□ -2.03
LIF1YGL090W SML1Q04964 104 aa2.37□□□□□ -2.03
LIF1YGL090W GSC2P40989 1895 aa2.37□□□□□ -2.03
LIF1YGL090W PAU19P0CE85 124 aa2.36□□□□□ -2.03
LIF1YGL090W RPL40AP0CH08 128 aaKnown RBP2.36□□□□□ -2.03
LIF1YGL090W RPL40BP0CH09 128 aaKnown RBP2.36□□□□□ -2.03
LIF1YGL090W KRE1P17260 313 aa2.36□□□□□ -2.03
LIF1YGL090W PAU3P25610 124 aa2.36□□□□□ -2.03
LIF1YGL090W YKR045CP36138 183 aa2.36□□□□□ -2.03
LIF1YGL090W GCV3P39726 170 aaPredicted RBP2.36□□□□□ -2.03
LIF1YGL090W SNN1P48232 102 aa2.36□□□□□ -2.03
LIF1YGL090W BRP1P53194 125 aa2.36□□□□□ -2.03
LIF1YGL090W PAU12P53343 120 aa2.36□□□□□ -2.03
LIF1YGL090W HPA2Q06592 156 aa2.36□□□□□ -2.03
LIF1YGL090W MHF2Q3E829 80 aa2.36□□□□□ -2.03
LIF1YGL090W PCC1Q3E833 88 aa2.36□□□□□ -2.03
LIF1YGL090W MLP1Q02455 1875 aaKnown RBP2.36□□□□□ -2.03
LIF1YGL090W RPL36BO14455 100 aaKnown RBP2.35□□□□□ -2.03
LIF1YGL090W RPL36AP05745 100 aaPredicted RBP2.35□□□□□ -2.03
LIF1YGL090W STF2P16965 84 aa2.35□□□□□ -2.03
LIF1YGL090W PAU2P32612 120 aa2.35□□□□□ -2.03
LIF1YGL090W SSS1P35179 80 aa2.35□□□□□ -2.03
LIF1YGL090W MRPS9P38120 278 aa2.35□□□□□ -2.03
LIF1YGL090W YFL051CP43552 160 aa2.35□□□□□ -2.03
LIF1YGL090W POP3P53833 195 aaPredicted RBP2.35□□□□□ -2.03
LIF1YGL090W YDR042CQ03205 200 aa2.35□□□□□ -2.03
LIF1YGL090W VPS68Q12016 184 aa2.35□□□□□ -2.03
LIF1YGL090W RRT15Q3E811 62 aa2.35□□□□□ -2.03
LIF1YGL090W MHF1Q3E835 90 aa2.35□□□□□ -2.03
LIF1YGL090W ENV10Q99382 181 aa2.35□□□□□ -2.03
LIF1YGL090W MYO1P08964 1928 aa2.34□□□□□ -2.03
LIF1YGL090W COX8P04039 78 aa2.34□□□□□ -2.03
LIF1YGL090W RPA12P32529 125 aaKnown RBP2.34□□□□□ -2.03
LIF1YGL090W UTH1P36135 365 aa2.34□□□□□ -2.03
LIF1YGL090W YHL005CP38752 130 aa2.34□□□□□ -2.03
LIF1YGL090W RSM18P40033 138 aa2.34□□□□□ -2.03
LIF1YGL090W SWM2P40342 146 aa2.34□□□□□ -2.03
LIF1YGL090W YDR034W-BQ6Q5X2 51 aa2.34□□□□□ -2.03
LIF1YGL090W YFR010W-AP0C5N0 62 aa2.33□□□□□ -2.04
LIF1YGL090W TOM6P33448 61 aa2.33□□□□□ -2.04
LIF1YGL090W PAU16P35994 123 aa2.33□□□□□ -2.04
LIF1YGL090W SRX1P36077 127 aa2.33□□□□□ -2.04
LIF1YGL090W YBR013CP38215 129 aa2.33□□□□□ -2.04
LIF1YGL090W PAU15P40585 124 aa2.33□□□□□ -2.04
LIF1YGL090W YJL027CP47063 138 aaPredicted RBP2.33□□□□□ -2.04
LIF1YGL090W YIL014C-AQ02598 104 aa2.33□□□□□ -2.04
LIF1YGL090W MET31Q03081 177 aa2.33□□□□□ -2.04
LIF1YGL090W YPR195CQ06594 109 aa2.33□□□□□ -2.04
LIF1YGL090W POC4Q12245 148 aaPredicted RBP2.33□□□□□ -2.04
LIF1YGL090W APC1P53886 1748 aa2.32□□□□□ -2.04
LIF1YGL090W RPB7P34087 171 aa2.32□□□□□ -2.04
LIF1YGL090W PAU24P38155 120 aa2.32□□□□□ -2.04
LIF1YGL090W ATX1P38636 73 aa2.32□□□□□ -2.04
LIF1YGL090W SOD1P00445 154 aaKnown RBP2.31□□□□□ -2.04
LIF1YGL090W YHR213WP0CI67 198 aa2.31□□□□□ -2.04
LIF1YGL090W YEL014CP39999 101 aa2.31□□□□□ -2.04
LIF1YGL090W RGM1Q00453 211 aa2.31□□□□□ -2.04
LIF1YGL090W ICY1Q04329 127 aa2.31□□□□□ -2.04
LIF1YGL090W YLR194CQ05777 254 aa2.31□□□□□ -2.04
LIF1YGL090W RIF1P29539 1916 aa2.3□□□□□ -2.04
LIF1YGL090W FAB1P34756 2278 aa2.3□□□□□ -2.04
LIF1YGL090W RTC6O14464 93 aa2.3□□□□□ -2.04
LIF1YGL090W YJL197C-AP0C5P0 93 aa2.3□□□□□ -2.04
LIF1YGL090W FIT2Q08906 153 aa2.3□□□□□ -2.04
LIF1YGL090W PRM3Q08931 133 aa2.3□□□□□ -2.04
LIF1YGL090W FIG2P25653 1609 aa2.29□□□□□ -2.04
LIF1YGL090W QCR8P08525 94 aa2.29□□□□□ -2.04
LIF1YGL090W COX23P38824 151 aa2.29□□□□□ -2.04
LIF1YGL090W YOL118CQ08259 102 aa2.29□□□□□ -2.04
LIF1YGL090W YMR175W-AQ3E766 64 aa2.29□□□□□ -2.04
LIF1YGL090W CMC4Q3E7A9 73 aa2.29□□□□□ -2.04
LIF1YGL090W CUP1-1P0CX80 61 aa2.28□□□□□ -2.04
LIF1YGL090W CUP1-2P0CX81 61 aa2.28□□□□□ -2.04
LIF1YGL090W HMRA2P0CY13 119 aa2.28□□□□□ -2.04
LIF1YGL090W PAU5P43575 122 aa2.28□□□□□ -2.04
LIF1YGL090W IMP2P46972 177 aa2.28□□□□□ -2.04
LIF1YGL090W YJL144WP47009 104 aa2.28□□□□□ -2.04
LIF1YGL090W ICS3P47034 131 aa2.28□□□□□ -2.04
LIF1YGL090W YHR007C-AQ07074 71 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 71.3 ms