RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	YLR342W-A	Q3E810	57 aa		4.33	□□□□□ -1.72
VTC2	YFL004W	MBB1	P39534	108 aa		4.32	□□□□□ -1.72
VTC2	YFL004W	AIM19	P40502	157 aa		4.32	□□□□□ -1.72
VTC2	YFL004W	YLR042C	Q07990	161 aa		4.32	□□□□□ -1.72
VTC2	YFL004W	BEM2	P39960	2167 aa	Known RBP	4.31	□□□□□ -1.72
VTC2	YFL004W	ADH5	P38113	351 aa	Known RBP	4.31	□□□□□ -1.72
VTC2	YFL004W	YHL018W	P38744	120 aa	Predicted RBP	4.31	□□□□□ -1.72
VTC2	YFL004W	REE1	P40893	198 aa		4.31	□□□□□ -1.72
VTC2	YFL004W	RRS1	Q08746	203 aa	Known RBP	4.31	□□□□□ -1.72
VTC2	YFL004W	TRP1	P00912	224 aa		4.31	□□□□□ -1.72
VTC2	YFL004W	RPL42A	P0CX27	106 aa	Known RBP	4.31	□□□□□ -1.72
VTC2	YFL004W	RPL42B	P0CX28	106 aa	Known RBP	4.31	□□□□□ -1.72
VTC2	YFL004W	GLE2	P40066	365 aa		4.31	□□□□□ -1.72
VTC2	YFL004W	PGU1	P47180	361 aa		4.31	□□□□□ -1.72
VTC2	YFL004W	YDR209C	Q03480	137 aa		4.31	□□□□□ -1.72
VTC2	YFL004W	PRM7	Q12459	698 aa		4.31	□□□□□ -1.72
VTC2	YFL004W	TAO3	P40468	2376 aa		4.31	□□□□□ -1.72
VTC2	YFL004W	YHR214C-D	P0CX93	97 aa		4.3	□□□□□ -1.72
VTC2	YFL004W	RRT13	P40042	185 aa		4.3	□□□□□ -1.72
VTC2	YFL004W	PBA1	Q05778	276 aa		4.3	□□□□□ -1.72
VTC2	YFL004W	YLR412C-A	Q3E742	68 aa		4.3	□□□□□ -1.72
VTC2	YFL004W	LDB16	P25587	256 aa		4.3	□□□□□ -1.72
VTC2	YFL004W	SIM1	P40472	476 aa		4.3	□□□□□ -1.72
VTC2	YFL004W	IES6	P32617	166 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	IMP2	P46972	177 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	DAP1	Q12091	152 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	RPL28	P02406	149 aa	Known RBP	4.29	□□□□□ -1.72
VTC2	YFL004W	YHR213W	P0CI67	198 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	RPL18A	P0CX49	186 aa	Known RBP	4.29	□□□□□ -1.72
VTC2	YFL004W	RPL18B	P0CX50	186 aa	Known RBP	4.29	□□□□□ -1.72
VTC2	YFL004W	YSY6	P38374	65 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	YIL086C	P40503	102 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	YNL190W	P53872	204 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	SDC1	Q03323	175 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	YDR114C	Q04597	100 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	EMC6	Q12431	108 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	YMR175W-A	Q3E766	64 aa		4.29	□□□□□ -1.72
VTC2	YFL004W	FAS1	P07149	2051 aa	Known RBP	4.28	□□□□□ -1.72
VTC2	YFL004W	GLO1	P50107	326 aa		4.28	□□□□□ -1.72
VTC2	YFL004W	YMR320W	Q04897	101 aa		4.28	□□□□□ -1.72
VTC2	YFL004W	YOR008C-A	Q3E7B9	74 aa		4.28	□□□□□ -1.72
VTC2	YFL004W	YDR034W-B	Q6Q5X2	51 aa		4.28	□□□□□ -1.72
VTC2	YFL004W	KSH1	Q8TGJ3	72 aa		4.28	□□□□□ -1.72
VTC2	YFL004W	CCW14	O13547	238 aa		4.27	□□□□□ -1.73
VTC2	YFL004W	ATP15	P21306	62 aa		4.27	□□□□□ -1.73
VTC2	YFL004W	MPC2	P38857	129 aa		4.27	□□□□□ -1.73
VTC2	YFL004W	MRPL19	P53875	158 aa		4.27	□□□□□ -1.73
VTC2	YFL004W	URM1	P40554	99 aa	Predicted RBP	4.27	□□□□□ -1.73
VTC2	YFL004W	MRPS12	P53732	153 aa		4.27	□□□□□ -1.73
VTC2	YFL004W	YER187W	P40102	141 aa		4.26	□□□□□ -1.73
VTC2	YFL004W	YGR164W	P53291	111 aa		4.26	□□□□□ -1.73
VTC2	YFL004W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
VTC2	YFL004W	YFL015C	P43578	164 aa		4.26	□□□□□ -1.73
VTC2	YFL004W	DCV1	P43595	202 aa		4.26	□□□□□ -1.73
VTC2	YFL004W	BET1	P22804	142 aa		4.25	□□□□□ -1.73
VTC2	YFL004W	MSA2	P36157	363 aa		4.25	□□□□□ -1.73
VTC2	YFL004W	TOM1	Q03280	3268 aa		4.25	□□□□□ -1.73
VTC2	YFL004W	RPL16B	P26785	198 aa	Known RBP	4.24	□□□□□ -1.73
VTC2	YFL004W	RRT1	P38192	103 aa		4.24	□□□□□ -1.73
VTC2	YFL004W	NRM1	P53718	249 aa		4.24	□□□□□ -1.73
VTC2	YFL004W	YBR209W	P38311	105 aa		4.24	□□□□□ -1.73
VTC2	YFL004W	HUR1	P45820	110 aa		4.24	□□□□□ -1.73
VTC2	YFL004W	YIL046W-A	Q3E7Z4	54 aa		4.24	□□□□□ -1.73
VTC2	YFL004W	YER084W	P40057	128 aa		4.23	□□□□□ -1.73
VTC2	YFL004W	LTP1	P40347	161 aa		4.23	□□□□□ -1.73
VTC2	YFL004W	YLR122C	Q12312	125 aa		4.23	□□□□□ -1.73
VTC2	YFL004W	UBC4	P15731	148 aa		4.23	□□□□□ -1.73
VTC2	YFL004W	YKR045C	P36138	183 aa		4.23	□□□□□ -1.73
VTC2	YFL004W	PEX17	P40155	199 aa		4.23	□□□□□ -1.73
VTC2	YFL004W	RPS14A	P06367	137 aa	Known RBP	4.22	□□□□□ -1.73
VTC2	YFL004W	MTC6	P38849	526 aa		4.22	□□□□□ -1.73
VTC2	YFL004W	YNL194C	P40169	301 aa		4.22	□□□□□ -1.73
VTC2	YFL004W	SFT1	P43682	97 aa		4.22	□□□□□ -1.73
VTC2	YFL004W	PIR5	P46999	287 aa		4.22	□□□□□ -1.73
VTC2	YFL004W	YJL027C	P47063	138 aa	Predicted RBP	4.22	□□□□□ -1.73
VTC2	YFL004W	HAL1	Q01766	294 aa		4.22	□□□□□ -1.73
VTC2	YFL004W	YLR281C	Q05863	155 aa		4.22	□□□□□ -1.73
VTC2	YFL004W	CTR2	P38865	189 aa		4.22	□□□□□ -1.73
VTC2	YFL004W	PPT2	Q12036	173 aa		4.22	□□□□□ -1.73
VTC2	YFL004W	YHR022C	P38763	256 aa		4.21	□□□□□ -1.73
VTC2	YFL004W	RPS14B	P39516	138 aa	Known RBP	4.21	□□□□□ -1.73
VTC2	YFL004W	YDR246W-A	Q3E763	66 aa		4.21	□□□□□ -1.73
VTC2	YFL004W	TOR2	P32600	2474 aa	Known RBP	4.21	□□□□□ -1.74
VTC2	YFL004W	YML122C	Q03207	126 aa		4.21	□□□□□ -1.74
VTC2	YFL004W	YKL183C-A	Q3E765	70 aa		4.21	□□□□□ -1.74
VTC2	YFL004W	YNL277W-A	Q3E7Z0	62 aa		4.21	□□□□□ -1.74
VTC2	YFL004W	YGR219W	P53307	113 aa		4.2	□□□□□ -1.74
VTC2	YFL004W	YOR029W	Q12243	111 aa		4.2	□□□□□ -1.74
VTC2	YFL004W	YLR285C-A	Q3E771	56 aa		4.2	□□□□□ -1.74
VTC2	YFL004W	MRPL39	P36533	70 aa		4.2	□□□□□ -1.74
VTC2	YFL004W	YJR146W	P47174	117 aa		4.2	□□□□□ -1.74
VTC2	YFL004W	TIM10	P87108	93 aa		4.2	□□□□□ -1.74
VTC2	YFL004W	GAT3	Q07928	141 aa		4.2	□□□□□ -1.74
VTC2	YFL004W	YAR029W	P39549	74 aa		4.19	□□□□□ -1.74
VTC2	YFL004W	RPL15A	P05748	204 aa	Known RBP	4.19	□□□□□ -1.74
VTC2	YFL004W	RPL16A	P26784	199 aa	Known RBP	4.19	□□□□□ -1.74
VTC2	YFL004W	SHU1	P38751	150 aa		4.19	□□□□□ -1.74
VTC2	YFL004W	YOL160W	Q08321	113 aa		4.19	□□□□□ -1.74
VTC2	YFL004W	FAB1	P34756	2278 aa		4.19	□□□□□ -1.74
VTC2	YFL004W	SEN1	Q00416	2231 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 110.3 ms