RNA–Protein interactions for RNA: YER178W

PDA1, Transcript of E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDA1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDA1YER178W ERI1P62651 68 aaKnown RBP4.83□□□□□ -1.64
PDA1YER178W LCL2Q08045 131 aa4.83□□□□□ -1.64
PDA1YER178W YLR112WQ12130 139 aa4.83□□□□□ -1.64
PDA1YER178W SVP26P38869 228 aa4.82□□□□□ -1.64
PDA1YER178W YER085CP40058 173 aa4.82□□□□□ -1.64
PDA1YER178W YML108WQ03759 105 aa4.82□□□□□ -1.64
PDA1YER178W COA3Q3E7B2 85 aa4.82□□□□□ -1.64
PDA1YER178W ANB1P19211 157 aa4.81□□□□□ -1.64
PDA1YER178W SEC72P39742 193 aaKnown RBP4.81□□□□□ -1.64
PDA1YER178W SEN15Q04675 128 aa4.81□□□□□ -1.64
PDA1YER178W MED7Q08278 222 aa4.81□□□□□ -1.64
PDA1YER178W ERG27Q12452 347 aaKnown RBP4.81□□□□□ -1.64
PDA1YER178W ADH2P00331 348 aaKnown RBP4.8□□□□□ -1.64
PDA1YER178W TRP1P00912 224 aa4.8□□□□□ -1.64
PDA1YER178W HMRA2P0CY13 119 aa4.8□□□□□ -1.64
PDA1YER178W YDR042CQ03205 200 aa4.8□□□□□ -1.64
PDA1YER178W YGL118CP53132 145 aa4.79□□□□□ -1.64
PDA1YER178W TPT1Q12272 230 aaKnown RBP4.79□□□□□ -1.64
PDA1YER178W YOR008C-AQ3E7B9 74 aa4.79□□□□□ -1.64
PDA1YER178W RPL11AP0C0W9 174 aaKnown RBP4.78□□□□□ -1.64
PDA1YER178W YDL022C-AP0C5L6 82 aa4.78□□□□□ -1.64
PDA1YER178W YAL064WP39711 94 aa4.78□□□□□ -1.64
PDA1YER178W POP3P53833 195 aaPredicted RBP4.78□□□□□ -1.64
PDA1YER178W GIS2P53849 153 aaKnown RBP RIP-Chip data4.78□□□□□ -1.64not detected
PDA1YER178W RPL11BQ3E757 174 aaPredicted RBP4.78□□□□□ -1.64
PDA1YER178W ERG28P40030 148 aa4.77□□□□□ -1.65
PDA1YER178W FYV4P38783 130 aaPredicted RBP4.76□□□□□ -1.65
PDA1YER178W OST3P48439 350 aa4.76□□□□□ -1.65
PDA1YER178W YMR295CQ03559 197 aa4.76□□□□□ -1.65
PDA1YER178W YLR194CQ05777 254 aa4.76□□□□□ -1.65
PDA1YER178W YPL229WQ99395 206 aa4.76□□□□□ -1.65
PDA1YER178W ATP15P21306 62 aa4.75□□□□□ -1.65
PDA1YER178W SMP1P38128 452 aa4.75□□□□□ -1.65
PDA1YER178W URM1P40554 99 aaPredicted RBP4.75□□□□□ -1.65
PDA1YER178W YCL021W-AQ96VH3 125 aa4.75□□□□□ -1.65
PDA1YER178W YPR010C-AA5Z2X5 72 aa4.74□□□□□ -1.65
PDA1YER178W YAR023CD6VPM8 179 aa4.74□□□□□ -1.65
PDA1YER178W RPC10P40422 70 aa4.74□□□□□ -1.65
PDA1YER178W BET5Q03630 159 aa4.74□□□□□ -1.65
PDA1YER178W PKR1Q03880 122 aaKnown RBP4.74□□□□□ -1.65
PDA1YER178W CUE4Q04201 117 aaPredicted RBP4.74□□□□□ -1.65
PDA1YER178W YMR103CQ04436 120 aa4.74□□□□□ -1.65
PDA1YER178W SSS1P35179 80 aa4.73□□□□□ -1.65
PDA1YER178W YKL070WP36087 169 aa4.73□□□□□ -1.65
PDA1YER178W DFM1Q12743 341 aaKnown RBP4.73□□□□□ -1.65
PDA1YER178W YIL134C-AQ45U18 67 aa4.73□□□□□ -1.65
PDA1YER178W MRP10O75012 95 aa4.72□□□□□ -1.65
PDA1YER178W RPL27BP0C2H7 136 aaKnown RBP4.72□□□□□ -1.65
PDA1YER178W RPL31AP0C2H8 113 aaKnown RBP4.72□□□□□ -1.65
PDA1YER178W ERV14P53173 138 aa4.72□□□□□ -1.65
PDA1YER178W SCS22Q6Q595 175 aa4.72□□□□□ -1.65
PDA1YER178W YAL065CO13511 128 aa4.71□□□□□ -1.66
PDA1YER178W YDR034C-AP0C289 58 aa4.71□□□□□ -1.66
PDA1YER178W YEL067CP39978 195 aa4.71□□□□□ -1.66
PDA1YER178W ENV10Q99382 181 aa4.7□□□□□ -1.66
PDA1YER178W APS1P35181 156 aa4.69□□□□□ -1.66
PDA1YER178W PAU16P35994 123 aa4.69□□□□□ -1.66
PDA1YER178W AIM11P87275 137 aa4.69□□□□□ -1.66
PDA1YER178W CMC2Q3E7A4 109 aa4.69□□□□□ -1.66
PDA1YER178W VTC1P40046 129 aaRIP-Chip data4.68□□□□□ -1.66not detected
PDA1YER178W CIN5P40917 295 aa4.68□□□□□ -1.66
PDA1YER178W MRPS12P53732 153 aa4.68□□□□□ -1.66
PDA1YER178W SEC11P15367 167 aa4.67□□□□□ -1.66
PDA1YER178W ATP16Q12165 160 aa4.67□□□□□ -1.66
PDA1YER178W YMR175W-AQ3E766 64 aa4.67□□□□□ -1.66
PDA1YER178W HTL1Q9URQ5 78 aa4.67□□□□□ -1.66
PDA1YER178W MRPL11P36521 249 aaPredicted RBP4.66□□□□□ -1.66
PDA1YER178W SHU1P38751 150 aa4.66□□□□□ -1.66
PDA1YER178W COX14P39103 70 aa4.66□□□□□ -1.66
PDA1YER178W YAR029WP39549 74 aa4.66□□□□□ -1.66
PDA1YER178W YDR029WQ12111 104 aa4.66□□□□□ -1.66
PDA1YER178W YKR041WP36134 250 aa4.65□□□□□ -1.67
PDA1YER178W PEX22P39718 180 aa4.65□□□□□ -1.67
PDA1YER178W YNR077CP53758 84 aa4.65□□□□□ -1.67
PDA1YER178W SNA2P56508 79 aa4.65□□□□□ -1.67
PDA1YER178W YPL261CQ08976 102 aa4.65□□□□□ -1.67
PDA1YER178W HAC1P41546 238 aa4.64□□□□□ -1.67
PDA1YER178W YLR307C-AQ3E825 87 aa4.64□□□□□ -1.67
PDA1YER178W RPL18AP0CX49 186 aaKnown RBP4.63□□□□□ -1.67
PDA1YER178W RPL18BP0CX50 186 aaKnown RBP4.63□□□□□ -1.67
PDA1YER178W TOA2P32774 122 aa4.63□□□□□ -1.67
PDA1YER178W YNL190WP53872 204 aa4.63□□□□□ -1.67
PDA1YER178W RPL28P02406 149 aaKnown RBP4.62□□□□□ -1.67
PDA1YER178W MRPL44P19956 98 aa4.62□□□□□ -1.67
PDA1YER178W IGD1P43598 195 aa4.62□□□□□ -1.67
PDA1YER178W YGL230CP53074 147 aa4.62□□□□□ -1.67
PDA1YER178W YLR050CQ12155 161 aaKnown RBP4.62□□□□□ -1.67
PDA1YER178W CNL1Q06333 122 aa4.61□□□□□ -1.67
PDA1YER178W YDL157CQ12082 118 aa4.61□□□□□ -1.67
PDA1YER178W RPL32P38061 130 aaKnown RBP4.6□□□□□ -1.67
PDA1YER178W PEX17P40155 199 aa4.6□□□□□ -1.67
PDA1YER178W YDL241WQ07738 123 aa4.6□□□□□ -1.67
PDA1YER178W COA6Q3E846 104 aa4.59□□□□□ -1.67
PDA1YER178W AQY2P0CD90 149 aa4.58□□□□□ -1.68
PDA1YER178W MSL1P40567 111 aaPredicted RBP4.58□□□□□ -1.68
PDA1YER178W YFR057WP43625 151 aa4.58□□□□□ -1.68
PDA1YER178W YLL006W-AQ3E814 58 aa4.58□□□□□ -1.68
PDA1YER178W ADH1P00330 348 aaKnown RBP4.57□□□□□ -1.68
PDA1YER178W DUT1P33317 147 aa4.57□□□□□ -1.68
PDA1YER178W YKL044WP36092 106 aa4.57□□□□□ -1.68
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms