RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeastyeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCC4YER147C RPS8AP0CX39 200 aaKnown RBP9.14□□□□□ -0.95
SCC4YER147C RPS8BP0CX40 200 aaKnown RBP9.14□□□□□ -0.95
SCC4YER147C YNL217WP40152 326 aa9.14□□□□□ -0.95
SCC4YER147C YJR146WP47174 117 aa9.14□□□□□ -0.95
SCC4YER147C PRM3Q08931 133 aa9.14□□□□□ -0.95
SCC4YER147C YPL257WQ08974 193 aa9.13□□□□□ -0.95
SCC4YER147C YOR097CQ12274 175 aaPredicted RBP9.13□□□□□ -0.95
SCC4YER147C ATP15P21306 62 aa9.13□□□□□ -0.95
SCC4YER147C RPL16AP26784 199 aaKnown RBP9.13□□□□□ -0.95
SCC4YER147C YLR042CQ07990 161 aa9.13□□□□□ -0.95
SCC4YER147C MRPS8Q03799 155 aa9.12□□□□□ -0.95
SCC4YER147C VTC1P40046 129 aaRIP-Chip data9.11□□□□□ -0.95not detected
SCC4YER147C AGE2P40529 298 aa9.11□□□□□ -0.95
SCC4YER147C YLR194CQ05777 254 aa9.11□□□□□ -0.95
SCC4YER147C YCR041WP37265 110 aa9.11□□□□□ -0.95
SCC4YER147C CDC43P18898 376 aa9.1□□□□□ -0.95
SCC4YER147C YPT53P36019 220 aa9.1□□□□□ -0.95
SCC4YER147C CIN5P40917 295 aa9.1□□□□□ -0.95
SCC4YER147C CCW14O13547 238 aa9.09□□□□□ -0.95
SCC4YER147C MRPL23Q12487 163 aaPredicted RBP9.09□□□□□ -0.95
SCC4YER147C SLO1Q3E784 85 aa9.09□□□□□ -0.95
SCC4YER147C TAR1Q8TGM6 124 aa9.09□□□□□ -0.95
SCC4YER147C YER145C-AA0A023PYF4 145 aa9.08□□□□□ -0.96
SCC4YER147C RPB9P27999 122 aa9.08□□□□□ -0.96
SCC4YER147C RRT13P40042 185 aa9.08□□□□□ -0.96
SCC4YER147C VHS2P40463 436 aa9.08□□□□□ -0.96
SCC4YER147C YFR035CP43608 114 aa9.08□□□□□ -0.96
SCC4YER147C POP7P38291 140 aa9.07□□□□□ -0.96
SCC4YER147C YER085CP40058 173 aa9.07□□□□□ -0.96
SCC4YER147C TRP1P00912 224 aa9.06□□□□□ -0.96
SCC4YER147C SOH1P38633 127 aa9.06□□□□□ -0.96
SCC4YER147C RPL43AP0CX25 92 aaKnown RBP9.06□□□□□ -0.96
SCC4YER147C RPL43BP0CX26 92 aa9.06□□□□□ -0.96
SCC4YER147C LSM6Q06406 86 aaKnown RBP9.06□□□□□ -0.96
SCC4YER147C FIP1P45976 327 aa9.05□□□□□ -0.96
SCC4YER147C NHP2P32495 156 aaPredicted RBP9.04□□□□□ -0.96
SCC4YER147C YCH1P42937 148 aa9.04□□□□□ -0.96
SCC4YER147C PEX17P40155 199 aa9.03□□□□□ -0.96
SCC4YER147C ALG13P53178 202 aa9.03□□□□□ -0.96
SCC4YER147C VTS1Q08831 523 aaKnown RBP RIP-Chip data9.03□□□□□ -0.96 RIP-Chip
SCC4YER147C RPL28P02406 149 aaKnown RBP9.02□□□□□ -0.96
SCC4YER147C RPL18AP0CX49 186 aaKnown RBP9.02□□□□□ -0.96
SCC4YER147C RPL18BP0CX50 186 aaKnown RBP9.02□□□□□ -0.96
SCC4YER147C YBR209WP38311 105 aa9.02□□□□□ -0.96
SCC4YER147C MET32Q12041 191 aa9.02□□□□□ -0.96
SCC4YER147C MRPS12P53732 153 aa9.02□□□□□ -0.97
SCC4YER147C CYC7P00045 113 aa9.01□□□□□ -0.97
SCC4YER147C RPL15AP05748 204 aaKnown RBP9.01□□□□□ -0.97
SCC4YER147C YGL088WP53151 121 aa9□□□□□ -0.97
SCC4YER147C RPL2AP0CX45 254 aaKnown RBP8.99□□□□□ -0.97
SCC4YER147C RPL2BP0CX46 254 aaKnown RBP8.99□□□□□ -0.97
SCC4YER147C UGX2P32772 223 aa8.99□□□□□ -0.97
SCC4YER147C DUT1P33317 147 aa8.99□□□□□ -0.97
SCC4YER147C YEL008WP40001 126 aa8.99□□□□□ -0.97
SCC4YER147C RPS11AP0CX47 156 aaKnown RBP8.98□□□□□ -0.97
SCC4YER147C RPS11BP0CX48 156 aaKnown RBP8.98□□□□□ -0.97
SCC4YER147C MID2P36027 376 aa8.98□□□□□ -0.97
SCC4YER147C SHU1P38751 150 aa8.98□□□□□ -0.97
SCC4YER147C YNL190WP53872 204 aa8.98□□□□□ -0.97
SCC4YER147C YCL021W-AQ96VH3 125 aa8.97□□□□□ -0.97
SCC4YER147C YHR212W-AP0CX91 67 aa8.96□□□□□ -0.97
SCC4YER147C PMP3P87284 55 aa8.96□□□□□ -0.97
SCC4YER147C HPA2Q06592 156 aa8.96□□□□□ -0.98
SCC4YER147C TOR1P35169 2470 aa8.95□□□□□ -0.98
SCC4YER147C YIL059CP40520 121 aa8.95□□□□□ -0.98
SCC4YER147C OST2P46964 130 aa8.95□□□□□ -0.98
SCC4YER147C UBC5P15732 148 aa8.94□□□□□ -0.98
SCC4YER147C ATX1P38636 73 aa8.94□□□□□ -0.98
SCC4YER147C MPC2P38857 129 aa8.94□□□□□ -0.98
SCC4YER147C QCR8P08525 94 aa8.93□□□□□ -0.98
SCC4YER147C YPS5P53057 165 aa8.91□□□□□ -0.98
SCC4YER147C KRE9P39005 276 aa8.9□□□□□ -0.98
SCC4YER147C NRG2P38082 220 aa8.87□□□□□ -0.99
SCC4YER147C YHR130CP38834 111 aa8.87□□□□□ -0.99
SCC4YER147C ARC15P40518 154 aaRIP-Chip data8.87□□□□□ -0.99not detected
SCC4YER147C YDL186WP48568 277 aa8.87□□□□□ -0.99
SCC4YER147C INO4P13902 151 aa8.86□□□□□ -0.99
SCC4YER147C RPA12P32529 125 aaKnown RBP8.86□□□□□ -0.99
SCC4YER147C RTG1P32607 177 aa8.86□□□□□ -0.99
SCC4YER147C YBR144CP34215 104 aa8.86□□□□□ -0.99
SCC4YER147C YAR029WP39549 74 aa8.85□□□□□ -0.99
SCC4YER147C YMR295CQ03559 197 aa8.85□□□□□ -0.99
SCC4YER147C COX10P21592 462 aa8.85□□□□□ -0.99
SCC4YER147C YIA6P40556 373 aa8.85□□□□□ -0.99
SCC4YER147C YBR126W-AQ8TGU7 68 aa8.85□□□□□ -0.99
SCC4YER147C PPT2Q12036 173 aa8.84□□□□□ -0.99
SCC4YER147C YCR075W-AQ3E830 75 aa8.84□□□□□ -0.99
SCC4YER147C EOS1P53938 366 aa8.83□□□□□ -1
SCC4YER147C ISD11Q6Q560 94 aa8.83□□□□□ -1
SCC4YER147C DSE2P38844 325 aa8.82□□□□□ -1
SCC4YER147C YDR274CP87283 123 aa8.82□□□□□ -1
SCC4YER147C YBR219CP38317 127 aa8.81□□□□□ -1
SCC4YER147C COX14P39103 70 aa8.81□□□□□ -1
SCC4YER147C ABF2Q02486 183 aa8.81□□□□□ -1
SCC4YER147C YMR122W-AQ3E842 84 aa8.81□□□□□ -1
SCC4YER147C CWP2P43497 92 aa8.8□□□□□ -1
SCC4YER147C YGR240C-AQ3E786 66 aa8.8□□□□□ -1
SCC4YER147C RGM1Q00453 211 aa8.78□□□□□ -1
SCC4YER147C YCR001WP25347 104 aa8.77□□□□□ -1.01
SCC4YER147C VAM10Q08474 114 aa8.77□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms