RNA–Protein interactions for RNA: YER096W

SHC1, Transcript of Sporulation-specific activator of Chs3p (chitin synthase III), yeastyeast

Gene SHC1, Length 1,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHC1YER096W NAT5Q08689 176 aa5.7□□□□□ -1.5
SHC1YER096W YGL230CP53074 147 aa5.69□□□□□ -1.5
SHC1YER096W YDL157CQ12082 118 aa5.69□□□□□ -1.5
SHC1YER096W RPL27BP0C2H7 136 aaKnown RBP5.69□□□□□ -1.5
SHC1YER096W UBC5P15732 148 aa5.69□□□□□ -1.5
SHC1YER096W YRA2P36036 203 aaKnown RBP RIP-Chip data5.69□□□□□ -1.5not detected
SHC1YER096W HAC1P41546 238 aa5.69□□□□□ -1.5
SHC1YER096W YMR103CQ04436 120 aa5.69□□□□□ -1.5
SHC1YER096W MRPL44P19956 98 aa5.68□□□□□ -1.5
SHC1YER096W YGL088WP53151 121 aa5.68□□□□□ -1.5
SHC1YER096W SCW10Q04951 389 aa5.68□□□□□ -1.5
SHC1YER096W VAM10Q08474 114 aa5.68□□□□□ -1.5
SHC1YER096W YDL022C-AP0C5L6 82 aa5.67□□□□□ -1.5
SHC1YER096W DFM1Q12743 341 aaKnown RBP5.67□□□□□ -1.5
SHC1YER096W HTL1Q9URQ5 78 aa5.67□□□□□ -1.5
SHC1YER096W YLR050CQ12155 161 aaKnown RBP5.66□□□□□ -1.5
SHC1YER096W FYV7Q12247 151 aa5.66□□□□□ -1.5
SHC1YER096W YOR008C-AQ3E7B9 74 aa5.66□□□□□ -1.5
SHC1YER096W APS1P35181 156 aa5.65□□□□□ -1.5
SHC1YER096W YKL070WP36087 169 aa5.65□□□□□ -1.5
SHC1YER096W YBR209WP38311 105 aa5.65□□□□□ -1.5
SHC1YER096W MSL1P40567 111 aaPredicted RBP5.65□□□□□ -1.5
SHC1YER096W YCR075W-AQ3E830 75 aa5.65□□□□□ -1.5
SHC1YER096W YBR126W-AQ8TGU7 68 aa5.65□□□□□ -1.5
SHC1YER096W SGF11Q03067 99 aa5.64□□□□□ -1.51
SHC1YER096W BET5Q03630 159 aa5.64□□□□□ -1.51
SHC1YER096W YGR240C-AQ3E786 66 aa5.64□□□□□ -1.51
SHC1YER096W YEL067CP39978 195 aa5.64□□□□□ -1.51
SHC1YER096W URM1P40554 99 aaPredicted RBP5.64□□□□□ -1.51
SHC1YER096W PMP3P87284 55 aa5.64□□□□□ -1.51
SHC1YER096W ADH2P00331 348 aaKnown RBP5.63□□□□□ -1.51
SHC1YER096W AIM29P36154 155 aa5.63□□□□□ -1.51
SHC1YER096W YEL008WP40001 126 aa5.63□□□□□ -1.51
SHC1YER096W HAL1Q01766 294 aa5.63□□□□□ -1.51
SHC1YER096W TRP1P00912 224 aa5.62□□□□□ -1.51
SHC1YER096W ATP15P21306 62 aa5.62□□□□□ -1.51
SHC1YER096W MRP49P32388 137 aa5.62□□□□□ -1.51
SHC1YER096W POP7P38291 140 aa5.62□□□□□ -1.51
SHC1YER096W YIL059CP40520 121 aa5.62□□□□□ -1.51
SHC1YER096W CRC1Q12289 327 aa5.62□□□□□ -1.51
SHC1YER096W ATP5P09457 212 aa5.61□□□□□ -1.51
SHC1YER096W ARC15P40518 154 aaRIP-Chip data5.61□□□□□ -1.51not detected
SHC1YER096W TMA7Q3E764 64 aaKnown RBP5.61□□□□□ -1.51
SHC1YER096W AIM11P87275 137 aa5.6□□□□□ -1.51
SHC1YER096W YBR219CP38317 127 aa5.59□□□□□ -1.51
SHC1YER096W YER085CP40058 173 aa5.59□□□□□ -1.51
SHC1YER096W YDL085C-AQ3E7B7 68 aaKnown RBP5.59□□□□□ -1.51
SHC1YER096W RPL31AP0C2H8 113 aaKnown RBP5.58□□□□□ -1.52
SHC1YER096W YKL044WP36092 106 aa5.58□□□□□ -1.52
SHC1YER096W YPL261CQ08976 102 aa5.58□□□□□ -1.52
SHC1YER096W YMR122W-AQ3E842 84 aa5.58□□□□□ -1.52
SHC1YER096W VTC1P40046 129 aaRIP-Chip data5.58□□□□□ -1.52not detected
SHC1YER096W YNR077CP53758 84 aa5.58□□□□□ -1.52
SHC1YER096W SAE3P89114 91 aa5.58□□□□□ -1.52
SHC1YER096W YBR182C-AQ8TGU6 64 aa5.58□□□□□ -1.52
SHC1YER096W RPS8AP0CX39 200 aaKnown RBP5.57□□□□□ -1.52
SHC1YER096W RPS8BP0CX40 200 aaKnown RBP5.57□□□□□ -1.52
SHC1YER096W YCR007CP25354 239 aa5.57□□□□□ -1.52
SHC1YER096W PAU23Q07987 124 aa5.57□□□□□ -1.52
SHC1YER096W PAU17Q12370 124 aa5.57□□□□□ -1.52
SHC1YER096W YKR041WP36134 250 aa5.56□□□□□ -1.52
SHC1YER096W RPL32P38061 130 aaKnown RBP5.56□□□□□ -1.52
SHC1YER096W YPL073CP40323 161 aa5.56□□□□□ -1.52
SHC1YER096W YLR194CQ05777 254 aa5.56□□□□□ -1.52
SHC1YER096W YCL021W-AQ96VH3 125 aa5.56□□□□□ -1.52
SHC1YER096W CIN5P40917 295 aa5.55□□□□□ -1.52
SHC1YER096W YLL066W-BQ8TGJ7 56 aa5.55□□□□□ -1.52
SHC1YER096W MRPS12P53732 153 aa5.54□□□□□ -1.52
SHC1YER096W YMR295CQ03559 197 aa5.54□□□□□ -1.52
SHC1YER096W ERI1P62651 68 aaKnown RBP5.53□□□□□ -1.52
SHC1YER096W MHR1Q06630 226 aa5.53□□□□□ -1.52
SHC1YER096W RPL33AP05744 107 aaKnown RBP5.53□□□□□ -1.52
SHC1YER096W RPL33BP41056 107 aaKnown RBP5.53□□□□□ -1.52
SHC1YER096W YFR057WP43625 151 aa5.53□□□□□ -1.52
SHC1YER096W DIF1O13577 133 aa5.52□□□□□ -1.53
SHC1YER096W SHU1P38751 150 aa5.52□□□□□ -1.53
SHC1YER096W RPR2P40571 144 aa5.52□□□□□ -1.53
SHC1YER096W YMR320WQ04897 101 aa5.52□□□□□ -1.53
SHC1YER096W RPL28P02406 149 aaKnown RBP5.51□□□□□ -1.53
SHC1YER096W RPL18AP0CX49 186 aaKnown RBP5.51□□□□□ -1.53
SHC1YER096W RPL18BP0CX50 186 aaKnown RBP5.51□□□□□ -1.53
SHC1YER096W RPF1P38805 295 aaKnown RBP5.51□□□□□ -1.53
SHC1YER096W YDR115WQ04598 105 aa5.51□□□□□ -1.53
SHC1YER096W YNL190WP53872 204 aa5.5□□□□□ -1.53
SHC1YER096W PBA1Q05778 276 aa5.5□□□□□ -1.53
SHC1YER096W YBL081WP38180 368 aaKnown RBP5.49□□□□□ -1.53
SHC1YER096W OXA1P39952 402 aa5.49□□□□□ -1.53
SHC1YER096W SPC1P46965 94 aa5.49□□□□□ -1.53
SHC1YER096W RRT15Q3E811 62 aa5.49□□□□□ -1.53
SHC1YER096W GLC8P41818 229 aa5.48□□□□□ -1.53
SHC1YER096W PEX17P40155 199 aa5.48□□□□□ -1.53
SHC1YER096W YLR363W-AQ3E747 85 aa5.48□□□□□ -1.53
SHC1YER096W IGO2Q9P305 131 aa5.48□□□□□ -1.53
SHC1YER096W YAR029WP39549 74 aa5.47□□□□□ -1.53
SHC1YER096W ERG28P40030 148 aa5.47□□□□□ -1.53
SHC1YER096W UGX2P32772 223 aa5.46□□□□□ -1.54
SHC1YER096W COX14P39103 70 aa5.46□□□□□ -1.54
SHC1YER096W YAL065CO13511 128 aa5.45□□□□□ -1.54
SHC1YER096W HAP3P13434 144 aa5.45□□□□□ -1.54
SHC1YER096W MID2P36027 376 aa5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms