RNA–Protein interactions for RNA: YER088W-B

YER088W-B, Transcript of Dubious open reading frame, yeastyeast

Gene YER088W-B, Length 147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YER088W-BYER088W-B LCL2Q08045 131 aa9.78□□□□□ -0.84
YER088W-BYER088W-B YER085CP40058 173 aa9.77□□□□□ -0.85
YER088W-BYER088W-B MED7Q08278 222 aa9.76□□□□□ -0.85
YER088W-BYER088W-B GSP1P32835 219 aaKnown RBP9.75□□□□□ -0.85
YER088W-BYER088W-B GSP2P32836 220 aaKnown RBP9.75□□□□□ -0.85
YER088W-BYER088W-B ARL3Q02804 198 aa9.75□□□□□ -0.85
YER088W-BYER088W-B YEL008WP40001 126 aa9.74□□□□□ -0.85
YER088W-BYER088W-B BET5Q03630 159 aa9.74□□□□□ -0.85
YER088W-BYER088W-B PKR1Q03880 122 aaKnown RBP9.74□□□□□ -0.85
YER088W-BYER088W-B YCL021W-AQ96VH3 125 aa9.74□□□□□ -0.85
YER088W-BYER088W-B YAR023CD6VPM8 179 aa9.73□□□□□ -0.85
YER088W-BYER088W-B YPL229WQ99395 206 aa9.73□□□□□ -0.85
YER088W-BYER088W-B URM1P40554 99 aaPredicted RBP9.72□□□□□ -0.85
YER088W-BYER088W-B ERV14P53173 138 aa9.72□□□□□ -0.85
YER088W-BYER088W-B YER134CP40081 178 aa9.71□□□□□ -0.86
YER088W-BYER088W-B MRP10O75012 95 aa9.7□□□□□ -0.86
YER088W-BYER088W-B HMRA2P0CY13 119 aa9.7□□□□□ -0.86
YER088W-BYER088W-B YDR034C-AP0C289 58 aa9.69□□□□□ -0.86
YER088W-BYER088W-B YBR219CP38317 127 aa9.69□□□□□ -0.86
YER088W-BYER088W-B OST3P48439 350 aa9.68□□□□□ -0.86
YER088W-BYER088W-B TIM11P81449 96 aaPredicted RBP9.68□□□□□ -0.86
YER088W-BYER088W-B YML108WQ03759 105 aa9.68□□□□□ -0.86
YER088W-BYER088W-B ENV10Q99382 181 aa9.68□□□□□ -0.86
YER088W-BYER088W-B YBL081WP38180 368 aaKnown RBP9.67□□□□□ -0.86
YER088W-BYER088W-B YAL064WP39711 94 aa9.67□□□□□ -0.86
YER088W-BYER088W-B RPC10P40422 70 aa9.67□□□□□ -0.86
YER088W-BYER088W-B NUP42P49686 430 aaKnown RBP9.67□□□□□ -0.86
YER088W-BYER088W-B YDR042CQ03205 200 aa9.67□□□□□ -0.86
YER088W-BYER088W-B TPT1Q12272 230 aaKnown RBP9.67□□□□□ -0.86
YER088W-BYER088W-B COA3Q3E7B2 85 aa9.67□□□□□ -0.86
YER088W-BYER088W-B HTL1Q9URQ5 78 aa9.67□□□□□ -0.86
YER088W-BYER088W-B YLR112WQ12130 139 aa9.65□□□□□ -0.86
YER088W-BYER088W-B POP3P53833 195 aaPredicted RBP9.64□□□□□ -0.87
YER088W-BYER088W-B YAR029WP39549 74 aa9.63□□□□□ -0.87
YER088W-BYER088W-B YMR295CQ03559 197 aa9.63□□□□□ -0.87
YER088W-BYER088W-B RPL31AP0C2H8 113 aaKnown RBP9.62□□□□□ -0.87
YER088W-BYER088W-B SAP30P38429 201 aa9.61□□□□□ -0.87
YER088W-BYER088W-B RPL27BP0C2H7 136 aaKnown RBP9.6□□□□□ -0.87
YER088W-BYER088W-B MRPL33P20084 86 aa9.6□□□□□ -0.87
YER088W-BYER088W-B YLR194CQ05777 254 aa9.6□□□□□ -0.87
YER088W-BYER088W-B ATP15P21306 62 aa9.59□□□□□ -0.87
YER088W-BYER088W-B CIN5P40917 295 aa9.59□□□□□ -0.87
YER088W-BYER088W-B YMR175W-AQ3E766 64 aa9.59□□□□□ -0.87
YER088W-BYER088W-B APS1P35181 156 aa9.58□□□□□ -0.88
YER088W-BYER088W-B YMR103CQ04436 120 aa9.58□□□□□ -0.88
YER088W-BYER088W-B YDR029WQ12111 104 aa9.57□□□□□ -0.88
YER088W-BYER088W-B SNA2P56508 79 aa9.56□□□□□ -0.88
YER088W-BYER088W-B CMC2Q3E7A4 109 aa9.56□□□□□ -0.88
YER088W-BYER088W-B FYV4P38783 130 aaPredicted RBP9.55□□□□□ -0.88
YER088W-BYER088W-B YKL070WP36087 169 aa9.54□□□□□ -0.88
YER088W-BYER088W-B CUE4Q04201 117 aaPredicted RBP9.53□□□□□ -0.88
YER088W-BYER088W-B YAL065CO13511 128 aa9.52□□□□□ -0.89
YER088W-BYER088W-B SSS1P35179 80 aa9.51□□□□□ -0.89
YER088W-BYER088W-B SMP1P38128 452 aa9.5□□□□□ -0.89
YER088W-BYER088W-B VTC1P40046 129 aaRIP-Chip data9.5□□□□□ -0.89not detected
YER088W-BYER088W-B DFM1Q12743 341 aaKnown RBP9.5□□□□□ -0.89
YER088W-BYER088W-B AIM11P87275 137 aa9.49□□□□□ -0.89
YER088W-BYER088W-B SHU1P38751 150 aa9.47□□□□□ -0.89
YER088W-BYER088W-B SEN15Q04675 128 aa9.47□□□□□ -0.89
YER088W-BYER088W-B PAU16P35994 123 aa9.46□□□□□ -0.9
YER088W-BYER088W-B COX14P39103 70 aa9.46□□□□□ -0.9
YER088W-BYER088W-B YDL241WQ07738 123 aa9.46□□□□□ -0.9
YER088W-BYER088W-B YDL022C-AP0C5L6 82 aa9.45□□□□□ -0.9
YER088W-BYER088W-B YIL134C-AQ45U18 67 aa9.45□□□□□ -0.9
YER088W-BYER088W-B MRPL11P36521 249 aaPredicted RBP9.44□□□□□ -0.9
YER088W-BYER088W-B YPL261CQ08976 102 aa9.44□□□□□ -0.9
YER088W-BYER088W-B YLR307C-AQ3E825 87 aa9.44□□□□□ -0.9
YER088W-BYER088W-B SCS22Q6Q595 175 aa9.43□□□□□ -0.9
YER088W-BYER088W-B CNL1Q06333 122 aa9.42□□□□□ -0.9
YER088W-BYER088W-B YLR050CQ12155 161 aaKnown RBP9.42□□□□□ -0.9
YER088W-BYER088W-B PEX22P39718 180 aa9.41□□□□□ -0.9
YER088W-BYER088W-B LCL1Q02786 101 aa9.41□□□□□ -0.9
YER088W-BYER088W-B ATP16Q12165 160 aa9.41□□□□□ -0.9
YER088W-BYER088W-B TOA2P32774 122 aa9.4□□□□□ -0.9
YER088W-BYER088W-B PPT2Q12036 173 aa9.4□□□□□ -0.9
YER088W-BYER088W-B RPL18AP0CX49 186 aaKnown RBP9.39□□□□□ -0.91
YER088W-BYER088W-B RPL18BP0CX50 186 aaKnown RBP9.39□□□□□ -0.91
YER088W-BYER088W-B PEX17P40155 199 aa9.39□□□□□ -0.91
YER088W-BYER088W-B AQY2P0CD90 149 aa9.38□□□□□ -0.91
YER088W-BYER088W-B YKR041WP36134 250 aa9.37□□□□□ -0.91
YER088W-BYER088W-B RPL32P38061 130 aaKnown RBP9.36□□□□□ -0.91
YER088W-BYER088W-B COA6Q3E846 104 aa9.36□□□□□ -0.91
YER088W-BYER088W-B SEC11P15367 167 aa9.35□□□□□ -0.91
YER088W-BYER088W-B OXA1P39952 402 aa9.35□□□□□ -0.91
YER088W-BYER088W-B HAC1P41546 238 aa9.35□□□□□ -0.91
YER088W-BYER088W-B SMD1Q02260 146 aaPredicted RBP9.35□□□□□ -0.91
YER088W-BYER088W-B ECM12O13529 151 aa9.34□□□□□ -0.91
YER088W-BYER088W-B MRPS12P53732 153 aa9.34□□□□□ -0.91
YER088W-BYER088W-B ADH1P00330 348 aaKnown RBP9.33□□□□□ -0.92
YER088W-BYER088W-B CWP2P43497 92 aa9.33□□□□□ -0.92
YER088W-BYER088W-B YGL041C-BQ3E750 60 aa9.33□□□□□ -0.92
YER088W-BYER088W-B QCR8P08525 94 aa9.32□□□□□ -0.92
YER088W-BYER088W-B RPF1P38805 295 aaKnown RBP9.31□□□□□ -0.92
YER088W-BYER088W-B STF1P01098 86 aa9.3□□□□□ -0.92
YER088W-BYER088W-B RPL28P02406 149 aaKnown RBP9.3□□□□□ -0.92
YER088W-BYER088W-B MVB12P42939 101 aa9.3□□□□□ -0.92
YER088W-BYER088W-B MMS2P53152 137 aa9.3□□□□□ -0.92
YER088W-BYER088W-B ABF2Q02486 183 aa9.3□□□□□ -0.92
YER088W-BYER088W-B MRPL44P19956 98 aa9.29□□□□□ -0.92
YER088W-BYER088W-B YKL044WP36092 106 aa9.29□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 36.2 ms