RNA–Protein interactions for RNA: YDR192C

NUP42, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP42, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP42YDR192C YMR244WQ04018 355 aa3.36□□□□□ -1.87
NUP42YDR192C YIL134C-AQ45U18 67 aa3.36□□□□□ -1.87
NUP42YDR192C BPH1P25356 2167 aa3.36□□□□□ -1.87
NUP42YDR192C Q0255P03881 472 aa3.35□□□□□ -1.87
NUP42YDR192C SEC4P07560 215 aaKnown RBP3.35□□□□□ -1.87
NUP42YDR192C YHR212W-AP0CX91 67 aa3.35□□□□□ -1.87
NUP42YDR192C YKR070WP36151 352 aaKnown RBP3.35□□□□□ -1.87
NUP42YDR192C YHR022CP38763 256 aa3.35□□□□□ -1.87
NUP42YDR192C EDC2P40023 145 aaPredicted RBP3.35□□□□□ -1.87
NUP42YDR192C GLE2P40066 365 aa3.35□□□□□ -1.87
NUP42YDR192C YER135CP40082 130 aa3.35□□□□□ -1.87
NUP42YDR192C SPI1P40092 148 aa3.35□□□□□ -1.87
NUP42YDR192C GLC8P41818 229 aa3.35□□□□□ -1.87
NUP42YDR192C YAR1P46683 200 aa3.35□□□□□ -1.87
NUP42YDR192C CWC27Q02770 301 aa3.35□□□□□ -1.87
NUP42YDR192C GRH1Q04410 372 aaKnown RBP3.35□□□□□ -1.87
NUP42YDR192C ECM19Q06011 112 aa3.35□□□□□ -1.87
NUP42YDR192C URA2P07259 2214 aaKnown RBP3.35□□□□□ -1.87
NUP42YDR192C VAR1P02381 398 aa3.34□□□□□ -1.87
NUP42YDR192C RPL2AP0CX45 254 aaKnown RBP3.34□□□□□ -1.87
NUP42YDR192C RPL2BP0CX46 254 aaKnown RBP3.34□□□□□ -1.87
NUP42YDR192C YCR023CP25351 611 aa3.34□□□□□ -1.87
NUP42YDR192C SPT4P32914 102 aaPredicted RBP3.34□□□□□ -1.87
NUP42YDR192C YBR090CP38253 122 aa3.34□□□□□ -1.87
NUP42YDR192C YMR141CP40211 102 aa3.34□□□□□ -1.87
NUP42YDR192C HUA1P40325 198 aa3.34□□□□□ -1.87
NUP42YDR192C YML079WQ03629 201 aa3.34□□□□□ -1.87
NUP42YDR192C PKR1Q03880 122 aaKnown RBP3.34□□□□□ -1.87
NUP42YDR192C DPP1Q05521 289 aa3.34□□□□□ -1.87
NUP42YDR192C PRM7Q12459 698 aa3.34□□□□□ -1.87
NUP42YDR192C PFY1P07274 126 aa3.33□□□□□ -1.88
NUP42YDR192C RPS11AP0CX47 156 aaKnown RBP3.33□□□□□ -1.88
NUP42YDR192C RPS11BP0CX48 156 aaKnown RBP3.33□□□□□ -1.88
NUP42YDR192C COX10P21592 462 aa3.33□□□□□ -1.88
NUP42YDR192C YER134CP40081 178 aa3.33□□□□□ -1.88
NUP42YDR192C BRP1P53194 125 aa3.33□□□□□ -1.88
NUP42YDR192C YGR017WP53210 297 aa3.33□□□□□ -1.88
NUP42YDR192C CAX4P53223 239 aa3.33□□□□□ -1.88
NUP42YDR192C SMD1Q02260 146 aaPredicted RBP3.33□□□□□ -1.88
NUP42YDR192C AIM34Q03673 198 aa3.33□□□□□ -1.88
NUP42YDR192C MRPS8Q03799 155 aa3.33□□□□□ -1.88
NUP42YDR192C YOR008C-AQ3E7B9 74 aa3.33□□□□□ -1.88
NUP42YDR192C YBR121C-AP0C5L4 52 aa3.32□□□□□ -1.88
NUP42YDR192C HAP3P13434 144 aa3.32□□□□□ -1.88
NUP42YDR192C GSP1P32835 219 aaKnown RBP3.32□□□□□ -1.88
NUP42YDR192C GSP2P32836 220 aaKnown RBP3.32□□□□□ -1.88
NUP42YDR192C FYV4P38783 130 aaPredicted RBP3.32□□□□□ -1.88
NUP42YDR192C ERG28P40030 148 aa3.32□□□□□ -1.88
NUP42YDR192C TOS6P48560 102 aa3.32□□□□□ -1.88
NUP42YDR192C POP3P53833 195 aaPredicted RBP3.32□□□□□ -1.88
NUP42YDR192C YPR014CQ6B0W2 109 aa3.32□□□□□ -1.88
NUP42YDR192C YKL044WP36092 106 aa3.31□□□□□ -1.88
NUP42YDR192C YER076CP40049 302 aa3.31□□□□□ -1.88
NUP42YDR192C MSL1P40567 111 aaPredicted RBP3.31□□□□□ -1.88
NUP42YDR192C YDR274CP87283 123 aa3.31□□□□□ -1.88
NUP42YDR192C PMP3P87284 55 aa3.31□□□□□ -1.88
NUP42YDR192C MGR2Q02889 113 aa3.31□□□□□ -1.88
NUP42YDR192C YDR042CQ03205 200 aa3.31□□□□□ -1.88
NUP42YDR192C YBR200W-AQ3E755 54 aa3.31□□□□□ -1.88
NUP42YDR192C SCM4P32564 187 aa3.3□□□□□ -1.88
NUP42YDR192C DCV1P43595 202 aa3.3□□□□□ -1.88
NUP42YDR192C FIP1P45976 327 aa3.3□□□□□ -1.88
NUP42YDR192C MIC26P50087 233 aa3.3□□□□□ -1.88
NUP42YDR192C ERI1P62651 68 aaKnown RBP3.3□□□□□ -1.88
NUP42YDR192C SEN15Q04675 128 aa3.3□□□□□ -1.88
NUP42YDR192C FCF1Q05498 189 aaPredicted RBP3.3□□□□□ -1.88
NUP42YDR192C PAU23Q07987 124 aa3.3□□□□□ -1.88
NUP42YDR192C MSA1Q08471 629 aa3.3□□□□□ -1.88
NUP42YDR192C PAU17Q12370 124 aa3.3□□□□□ -1.88
NUP42YDR192C YKL183C-AQ3E765 70 aa3.3□□□□□ -1.88
NUP42YDR192C YGR240C-AQ3E786 66 aa3.3□□□□□ -1.88
NUP42YDR192C MIG1P27705 504 aa3.29□□□□□ -1.88
NUP42YDR192C YNL200CP40165 246 aaKnown RBP3.29□□□□□ -1.88
NUP42YDR192C YGL230CP53074 147 aa3.29□□□□□ -1.88
NUP42YDR192C COX12Q01519 83 aa3.29□□□□□ -1.88
NUP42YDR192C YIL014C-AQ02598 104 aa3.29□□□□□ -1.88
NUP42YDR192C YPR013CQ12145 317 aa3.29□□□□□ -1.88
NUP42YDR192C YAR029WP39549 74 aa3.28□□□□□ -1.88
NUP42YDR192C CIN5P40917 295 aa3.28□□□□□ -1.88
NUP42YDR192C SGF11Q03067 99 aa3.28□□□□□ -1.88
NUP42YDR192C VPS71Q03433 280 aa3.28□□□□□ -1.88
NUP42YDR192C YMR103CQ04436 120 aa3.28□□□□□ -1.88
NUP42YDR192C VAM10Q08474 114 aa3.28□□□□□ -1.88
NUP42YDR192C NAT5Q08689 176 aa3.28□□□□□ -1.88
NUP42YDR192C SCS22Q6Q595 175 aa3.28□□□□□ -1.88
NUP42YDR192C YPR010C-AA5Z2X5 72 aa3.27□□□□□ -1.89
NUP42YDR192C SEC11P15367 167 aa3.27□□□□□ -1.89
NUP42YDR192C MRP49P32388 137 aa3.27□□□□□ -1.89
NUP42YDR192C YKR032WP36127 104 aa3.27□□□□□ -1.89
NUP42YDR192C YJL028WP47062 111 aa3.27□□□□□ -1.89
NUP42YDR192C YLR042CQ07990 161 aa3.27□□□□□ -1.89
NUP42YDR192C YDL157CQ12082 118 aa3.27□□□□□ -1.89
NUP42YDR192C YDL012CQ12489 107 aa3.27□□□□□ -1.89
NUP42YDR192C HMRA2P0CY13 119 aa3.26□□□□□ -1.89
NUP42YDR192C YPL073CP40323 161 aa3.26□□□□□ -1.89
NUP42YDR192C DGA1Q08650 418 aa3.26□□□□□ -1.89
NUP42YDR192C YPL261CQ08976 102 aa3.26□□□□□ -1.89
NUP42YDR192C YLR363W-AQ3E747 85 aa3.26□□□□□ -1.89
NUP42YDR192C YAL063C-AQ3E791 96 aa3.26□□□□□ -1.89
NUP42YDR192C QCR8P08525 94 aa3.25□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms