RNA–Protein interactions for RNA: YDL126C

CDC48, Transcript of AAA ATPase, yeastyeast

Gene CDC48, Length 2,508 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC48YDL126C SCS22Q6Q595 175 aa3.58□□□□□ -1.84
CDC48YDL126C MRS4P23500 304 aa3.57□□□□□ -1.84
CDC48YDL126C CWP2P43497 92 aa3.57□□□□□ -1.84
CDC48YDL126C TDA4P47153 279 aa3.57□□□□□ -1.84
CDC48YDL126C YPL278CQ08990 100 aa3.57□□□□□ -1.84
CDC48YDL126C AGA2P32781 87 aa3.56□□□□□ -1.84
CDC48YDL126C SFT2P38166 215 aa3.56□□□□□ -1.84
CDC48YDL126C RPL15AP05748 204 aaKnown RBP3.56□□□□□ -1.84
CDC48YDL126C SKI6P46948 246 aaPredicted RBP3.56□□□□□ -1.84
CDC48YDL126C YMR181CQ03231 154 aa3.56□□□□□ -1.84
CDC48YDL126C LPP1Q04396 274 aa3.56□□□□□ -1.84
CDC48YDL126C MTC6P38849 526 aa3.55□□□□□ -1.84
CDC48YDL126C DFG10P40526 253 aa3.55□□□□□ -1.84
CDC48YDL126C ATP19P81451 68 aa3.55□□□□□ -1.84
CDC48YDL126C AYT1Q12226 474 aa3.55□□□□□ -1.84
CDC48YDL126C COA3Q3E7B2 85 aa3.55□□□□□ -1.84
CDC48YDL126C YBL059WP34224 193 aa3.55□□□□□ -1.84
CDC48YDL126C YNL217WP40152 326 aa3.55□□□□□ -1.84
CDC48YDL126C SOD1P00445 154 aaKnown RBP3.54□□□□□ -1.84
CDC48YDL126C UBC4P15731 148 aa3.54□□□□□ -1.84
CDC48YDL126C YCR050CP25630 102 aa3.54□□□□□ -1.84
CDC48YDL126C GPI19Q04082 140 aa3.54□□□□□ -1.84
CDC48YDL126C RPL16AP26784 199 aaKnown RBP3.54□□□□□ -1.84
CDC48YDL126C YER084WP40057 128 aa3.54□□□□□ -1.84
CDC48YDL126C LSM6Q06406 86 aaKnown RBP3.54□□□□□ -1.84
CDC48YDL126C POC4Q12245 148 aaPredicted RBP3.54□□□□□ -1.84
CDC48YDL126C TIM22Q12328 207 aa3.54□□□□□ -1.84
CDC48YDL126C YLR365WQ7LIF2 110 aa3.54□□□□□ -1.84
CDC48YDL126C GPI18P38211 433 aa3.53□□□□□ -1.84
CDC48YDL126C YDR042CQ03205 200 aa3.53□□□□□ -1.84
CDC48YDL126C KSH1Q8TGJ3 72 aa3.53□□□□□ -1.84
CDC48YDL126C SIP18P50263 79 aa3.53□□□□□ -1.84
CDC48YDL126C YMR175W-AQ3E766 64 aa3.53□□□□□ -1.84
CDC48YDL126C YFR032C-BQ8TGU2 87 aa3.53□□□□□ -1.84
CDC48YDL126C YCL021W-AQ96VH3 125 aa3.53□□□□□ -1.84
CDC48YDL126C BLM10P43583 2143 aa3.53□□□□□ -1.84
CDC48YDL126C YCR043CP25361 127 aa3.52□□□□□ -1.85
CDC48YDL126C IMP1P28627 190 aa3.52□□□□□ -1.85
CDC48YDL126C PAM17P36147 197 aa3.52□□□□□ -1.85
CDC48YDL126C CTR2P38865 189 aa3.52□□□□□ -1.85
CDC48YDL126C SPG1P50088 95 aa3.52□□□□□ -1.85
CDC48YDL126C YGL260WP53056 76 aa3.52□□□□□ -1.85
CDC48YDL126C YGR018CP53211 109 aa3.52□□□□□ -1.85
CDC48YDL126C HAL1Q01766 294 aa3.52□□□□□ -1.85
CDC48YDL126C YNL162W-AQ3E7A8 72 aa3.52□□□□□ -1.85
CDC48YDL126C YPR108W-AQ3E7B3 70 aa3.52□□□□□ -1.85
CDC48YDL126C SWT21P53873 357 aaPredicted RBP3.52□□□□□ -1.85
CDC48YDL126C ERG2P32352 222 aa3.51□□□□□ -1.85
CDC48YDL126C FZF1P32805 299 aa3.51□□□□□ -1.85
CDC48YDL126C SWD3P38123 315 aa3.51□□□□□ -1.85
CDC48YDL126C EDC2P40023 145 aaPredicted RBP3.51□□□□□ -1.85
CDC48YDL126C YJR085CP47131 105 aaKnown RBP3.51□□□□□ -1.85
CDC48YDL126C COA2Q3E823 68 aa3.51□□□□□ -1.85
CDC48YDL126C HUG1Q6Q5K6 68 aa3.51□□□□□ -1.85
CDC48YDL126C CDC39P25655 2108 aaKnown RBP3.51□□□□□ -1.85
CDC48YDL126C FPR2P32472 135 aa3.5□□□□□ -1.85
CDC48YDL126C PAU7P39545 55 aa3.5□□□□□ -1.85
CDC48YDL126C YDR381C-AQ3E6R5 114 aa3.5□□□□□ -1.85
CDC48YDL126C YOR192C-CQ3E736 78 aa3.5□□□□□ -1.85
CDC48YDL126C SEC16P48415 2195 aaKnown RBP3.5□□□□□ -1.85
CDC48YDL126C ACC1Q00955 2233 aaKnown RBP3.5□□□□□ -1.85
CDC48YDL126C YHL005CP38752 130 aa3.5□□□□□ -1.85
CDC48YDL126C SPI1P40092 148 aa3.5□□□□□ -1.85
CDC48YDL126C RRT15Q3E811 62 aa3.5□□□□□ -1.85
CDC48YDL126C YGL088WP53151 121 aa3.49□□□□□ -1.85
CDC48YDL126C YOL118CQ08259 102 aa3.49□□□□□ -1.85
CDC48YDL126C RPS23AP0CX29 145 aaKnown RBP3.49□□□□□ -1.85
CDC48YDL126C RPS23BP0CX30 145 aa3.49□□□□□ -1.85
CDC48YDL126C RPS8AP0CX39 200 aaKnown RBP3.49□□□□□ -1.85
CDC48YDL126C RPS8BP0CX40 200 aaKnown RBP3.49□□□□□ -1.85
CDC48YDL126C YHL037CP38733 133 aa3.49□□□□□ -1.85
CDC48YDL126C YGR269WP40326 108 aa3.49□□□□□ -1.85
CDC48YDL126C GAT4P40569 121 aa3.49□□□□□ -1.85
CDC48YDL126C YFL051CP43552 160 aa3.49□□□□□ -1.85
CDC48YDL126C API2Q04413 109 aa3.49□□□□□ -1.85
CDC48YDL126C SRL1Q08673 210 aa3.49□□□□□ -1.85
CDC48YDL126C EMC6Q12431 108 aa3.49□□□□□ -1.85
CDC48YDL126C YLR281CQ05863 155 aa3.48□□□□□ -1.85
CDC48YDL126C TOR2P32600 2474 aaKnown RBP3.48□□□□□ -1.85
CDC48YDL126C DAD1Q12248 94 aa3.48□□□□□ -1.85
CDC48YDL126C CSF1Q12150 2958 aa3.48□□□□□ -1.85
CDC48YDL126C ROX3P25046 220 aa3.47□□□□□ -1.85
CDC48YDL126C YHR173CP38864 112 aa3.47□□□□□ -1.85
CDC48YDL126C YPI1P43587 155 aa3.47□□□□□ -1.85
CDC48YDL126C TSC3Q3E790 80 aa3.47□□□□□ -1.85
CDC48YDL126C YER078W-AQ3E7A2 54 aa3.47□□□□□ -1.85
CDC48YDL126C CCW14O13547 238 aa3.47□□□□□ -1.85
CDC48YDL126C YSY6P38374 65 aa3.47□□□□□ -1.85
CDC48YDL126C KNH1P50112 268 aa3.47□□□□□ -1.85
CDC48YDL126C YDR114CQ04597 100 aa3.47□□□□□ -1.85
CDC48YDL126C BET1P22804 142 aa3.46□□□□□ -1.85
CDC48YDL126C RRT13P40042 185 aa3.46□□□□□ -1.85
CDC48YDL126C YFL019CP43576 117 aa3.46□□□□□ -1.85
CDC48YDL126C SMD1Q02260 146 aaPredicted RBP3.46□□□□□ -1.85
CDC48YDL126C YKL065W-AQ2V2P2 73 aa3.46□□□□□ -1.85
CDC48YDL126C YGL193CP53097 103 aa3.46□□□□□ -1.86
CDC48YDL126C SED1Q01589 338 aa3.46□□□□□ -1.86
CDC48YDL126C TMC1Q08422 150 aaPredicted RBP3.46□□□□□ -1.86
CDC48YDL126C SEN1Q00416 2231 aaKnown RBP3.45□□□□□ -1.86
CDC48YDL126C RPL39P04650 51 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms