RNA–Protein interactions for RNA: YBR010W

HHT1, Transcript of Histone H3, yeast

Gene HHT1, Length 411 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HHT1	YBR010W	KRE5	P22023	1365 aa		0.47	□□□□□ -2.33
HHT1	YBR010W	IMP2	P46972	177 aa		0.47	□□□□□ -2.33
HHT1	YBR010W	YDR210W	Q03482	75 aa		0.47	□□□□□ -2.33
HHT1	YBR010W	YOL118C	Q08259	102 aa		0.47	□□□□□ -2.33
HHT1	YBR010W	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.47	□□□□□ -2.33
HHT1	YBR010W	AUA1	P32450	94 aa		0.46	□□□□□ -2.34
HHT1	YBR010W	SKI3	P17883	1432 aa	Known RBP	0.46	□□□□□ -2.34
HHT1	YBR010W	GEA1	P47102	1408 aa	Predicted RBP	0.46	□□□□□ -2.34
HHT1	YBR010W	SRB6	P32570	121 aa		0.45	□□□□□ -2.34
HHT1	YBR010W	YIL086C	P40503	102 aa		0.45	□□□□□ -2.34
HHT1	YBR010W	MIX14	Q04341	121 aa		0.45	□□□□□ -2.34
HHT1	YBR010W	FYV7	Q12247	151 aa		0.45	□□□□□ -2.34
HHT1	YBR010W	KSH1	Q8TGJ3	72 aa		0.45	□□□□□ -2.34
HHT1	YBR010W	PDR11	P40550	1411 aa		0.45	□□□□□ -2.34
HHT1	YBR010W	BUD4	P47136	1447 aa		0.45	□□□□□ -2.34
HHT1	YBR010W	ZEO1	Q08245	113 aa		0.44	□□□□□ -2.34
HHT1	YBR010W	YPL225W	Q08971	146 aa	Known RBP	0.44	□□□□□ -2.34
HHT1	YBR010W	BPT1	P14772	1559 aa		0.44	□□□□□ -2.34
HHT1	YBR010W	LAA1	P39526	2014 aa		0.43	□□□□□ -2.34
HHT1	YBR010W	SHU1	P38751	150 aa		0.43	□□□□□ -2.34
HHT1	YBR010W	GCV3	P39726	170 aa	Predicted RBP	0.43	□□□□□ -2.34
HHT1	YBR010W	PAU5	P43575	122 aa		0.43	□□□□□ -2.34
HHT1	YBR010W	RSM19	P53733	91 aa	Predicted RBP	0.43	□□□□□ -2.34
HHT1	YBR010W	YDR010C	Q12426	110 aa		0.43	□□□□□ -2.34
HHT1	YBR010W	COX19	Q3E731	98 aa		0.43	□□□□□ -2.34
HHT1	YBR010W	YCR095W-A	Q3E787	52 aa		0.43	□□□□□ -2.34
HHT1	YBR010W	YPL038W-A	Q3E7B4	63 aa		0.43	□□□□□ -2.34
HHT1	YBR010W	TOP2	P06786	1428 aa	Known RBP	0.43	□□□□□ -2.34
HHT1	YBR010W	URB1	P34241	1764 aa	Known RBP	0.42	□□□□□ -2.34
HHT1	YBR010W	GEA2	P39993	1459 aa	Known RBP	0.42	□□□□□ -2.34
HHT1	YBR010W	ROX3	P25046	220 aa		0.42	□□□□□ -2.34
HHT1	YBR010W	YHL005C	P38752	130 aa		0.42	□□□□□ -2.34
HHT1	YBR010W	MPC2	P38857	129 aa		0.42	□□□□□ -2.34
HHT1	YBR010W	COX12	Q01519	83 aa		0.42	□□□□□ -2.34
HHT1	YBR010W	YBR072C-A	Q3E794	53 aa		0.42	□□□□□ -2.34
HHT1	YBR010W	SEC16	P48415	2195 aa	Known RBP	0.42	□□□□□ -2.34
HHT1	YBR010W	SRB8	P25648	1427 aa		0.41	□□□□□ -2.34
HHT1	YBR010W	YHR173C	P38864	112 aa		0.41	□□□□□ -2.34
HHT1	YBR010W	NHP10	Q03435	203 aa		0.41	□□□□□ -2.34
HHT1	YBR010W	YOR289W	Q12012	251 aa	Predicted RBP	0.41	□□□□□ -2.34
HHT1	YBR010W	REV3	P14284	1504 aa		0.41	□□□□□ -2.34
HHT1	YBR010W	YRF1-6	P53819	1859 aa		0.41	□□□□□ -2.34
HHT1	YBR010W	CAT8	P39113	1433 aa		0.4	□□□□□ -2.34
HHT1	YBR010W	PAU6	P0CE90	120 aa		0.4	□□□□□ -2.35
HHT1	YBR010W	PAU18	P0CE91	120 aa		0.4	□□□□□ -2.35
HHT1	YBR010W	MRPL38	P35996	138 aa	Predicted RBP	0.4	□□□□□ -2.35
HHT1	YBR010W	SWM2	P40342	146 aa		0.4	□□□□□ -2.35
HHT1	YBR010W	MRX7	P53869	86 aa		0.4	□□□□□ -2.35
HHT1	YBR010W	SNA2	P56508	79 aa		0.4	□□□□□ -2.35
HHT1	YBR010W	MHF2	Q3E829	80 aa		0.4	□□□□□ -2.35
HHT1	YBR010W	YCL001W-B	Q96VH2	84 aa		0.4	□□□□□ -2.35
HHT1	YBR010W	SEC7	P11075	2009 aa	Known RBP	0.39	□□□□□ -2.35
HHT1	YBR010W	HMRA1	P0CY11	126 aa		0.39	□□□□□ -2.35
HHT1	YBR010W	MRP17	P28778	131 aa		0.39	□□□□□ -2.35
HHT1	YBR010W	NHP2	P32495	156 aa	Predicted RBP	0.39	□□□□□ -2.35
HHT1	YBR010W	ICY1	Q04329	127 aa		0.39	□□□□□ -2.35
HHT1	YBR010W	RRT15	Q3E811	62 aa		0.39	□□□□□ -2.35
HHT1	YBR010W	SUS1	Q6WNK7	96 aa		0.39	□□□□□ -2.35
HHT1	YBR010W	SSN2	P38931	1420 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	TY4B-H	P0C2J7	1802 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	RSF2	P46974	1380 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	RPS11A	P0CX47	156 aa	Known RBP	0.38	□□□□□ -2.35
HHT1	YBR010W	RPS11B	P0CX48	156 aa	Known RBP	0.38	□□□□□ -2.35
HHT1	YBR010W	PDX3	P38075	228 aa	Known RBP	0.38	□□□□□ -2.35
HHT1	YBR010W	YBL071C	P38185	102 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	YBR292C	P38357	123 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	SNU13	P39990	126 aa	Known RBP	0.38	□□□□□ -2.35
HHT1	YBR010W	EMC5	P40540	141 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	SCP1	Q08873	200 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	YOL164W-A	Q3E7A5	60 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	YKL068W-A	Q3E826	78 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	YNR034W-A	Q3E841	98 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	SNF2	P22082	1703 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	SMC4	Q12267	1418 aa		0.38	□□□□□ -2.35
HHT1	YBR010W	NTE1	Q04958	1679 aa		0.37	□□□□□ -2.35
HHT1	YBR010W	URA2	P07259	2214 aa	Known RBP	0.37	□□□□□ -2.35
HHT1	YBR010W	ECM12	O13529	151 aa		0.37	□□□□□ -2.35
HHT1	YBR010W	PAI3	P01094	68 aa		0.37	□□□□□ -2.35
HHT1	YBR010W	YCR085W	P25650	117 aa		0.37	□□□□□ -2.35
HHT1	YBR010W	LSM2	P38203	95 aa	Known RBP	0.37	□□□□□ -2.35
HHT1	YBR010W	ATX1	P38636	73 aa		0.37	□□□□□ -2.35
HHT1	YBR010W	MSL1	P40567	111 aa	Predicted RBP	0.37	□□□□□ -2.35
HHT1	YBR010W	RPS29B	P41058	56 aa	Known RBP	0.37	□□□□□ -2.35
HHT1	YBR010W	YDR029W	Q12111	104 aa		0.37	□□□□□ -2.35
HHT1	YBR010W	LTE1	P07866	1435 aa		0.37	□□□□□ -2.35
HHT1	YBR010W	YHR214C-D	P0CX93	97 aa		0.36	□□□□□ -2.35
HHT1	YBR010W	SSS1	P35179	80 aa		0.36	□□□□□ -2.35
HHT1	YBR010W	AIM19	P40502	157 aa		0.36	□□□□□ -2.35
HHT1	YBR010W	SPC1	P46965	94 aa		0.36	□□□□□ -2.35
HHT1	YBR010W	YDR042C	Q03205	200 aa		0.36	□□□□□ -2.35
HHT1	YBR010W	PAU20	Q08322	120 aa		0.36	□□□□□ -2.35
HHT1	YBR010W	YOR105W	Q08504	108 aa		0.36	□□□□□ -2.35
HHT1	YBR010W	COA2	Q3E823	68 aa		0.36	□□□□□ -2.35
HHT1	YBR010W	COX9	P07255	59 aa		0.35	□□□□□ -2.35
HHT1	YBR010W	PAU1	P0CE88	120 aa		0.35	□□□□□ -2.35
HHT1	YBR010W	PAU14	P0CE89	120 aa		0.35	□□□□□ -2.35
HHT1	YBR010W	PAU8	P0CE92	120 aa		0.35	□□□□□ -2.35
HHT1	YBR010W	PAU11	P0CE93	120 aa		0.35	□□□□□ -2.35
HHT1	YBR010W	FPR2	P32472	135 aa		0.35	□□□□□ -2.35
HHT1	YBR010W	RPA12	P32529	125 aa	Known RBP	0.35	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms