RNA–Protein interactions for RNA: YBL093C

ROX3, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene ROX3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ROX3	YBL093C	TOS6	P48560	102 aa		3.92	□□□□□ -1.78
ROX3	YBL093C	YLR042C	Q07990	161 aa		3.92	□□□□□ -1.78
ROX3	YBL093C	YDL157C	Q12082	118 aa		3.92	□□□□□ -1.78
ROX3	YBL093C	YGL230C	P53074	147 aa		3.91	□□□□□ -1.78
ROX3	YBL093C	COX12	Q01519	83 aa		3.91	□□□□□ -1.78
ROX3	YBL093C	SCW10	Q04951	389 aa		3.91	□□□□□ -1.78
ROX3	YBL093C	NAT5	Q08689	176 aa		3.91	□□□□□ -1.78
ROX3	YBL093C	PPT2	Q12036	173 aa		3.91	□□□□□ -1.78
ROX3	YBL093C	YLR050C	Q12155	161 aa	Known RBP	3.91	□□□□□ -1.78
ROX3	YBL093C	ATP5	P09457	212 aa		3.9	□□□□□ -1.79
ROX3	YBL093C	YKR070W	P36151	352 aa	Known RBP	3.9	□□□□□ -1.79
ROX3	YBL093C	FYV4	P38783	130 aa	Predicted RBP	3.9	□□□□□ -1.79
ROX3	YBL093C	DCV1	P43595	202 aa		3.9	□□□□□ -1.79
ROX3	YBL093C	YPS5	P53057	165 aa		3.9	□□□□□ -1.79
ROX3	YBL093C	PKR1	Q03880	122 aa	Known RBP	3.9	□□□□□ -1.79
ROX3	YBL093C	MSC3	Q05812	728 aa		3.9	□□□□□ -1.79
ROX3	YBL093C	SCS22	Q6Q595	175 aa		3.9	□□□□□ -1.79
ROX3	YBL093C	NRG2	P38082	220 aa		3.89	□□□□□ -1.79
ROX3	YBL093C	YMR103C	Q04436	120 aa		3.89	□□□□□ -1.79
ROX3	YBL093C	LSO2	Q3E772	92 aa	Known RBP	3.89	□□□□□ -1.79
ROX3	YBL093C	COA3	Q3E7B2	85 aa		3.89	□□□□□ -1.79
ROX3	YBL093C	YDL085C-A	Q3E7B7	68 aa	Known RBP	3.89	□□□□□ -1.79
ROX3	YBL093C	HMRA2	P0CY13	119 aa		3.88	□□□□□ -1.79
ROX3	YBL093C	YCR007C	P25354	239 aa		3.88	□□□□□ -1.79
ROX3	YBL093C	KRE9	P39005	276 aa		3.88	□□□□□ -1.79
ROX3	YBL093C	YJR146W	P47174	117 aa		3.88	□□□□□ -1.79
ROX3	YBL093C	BET5	Q03630	159 aa		3.88	□□□□□ -1.79
ROX3	YBL093C	DGA1	Q08650	418 aa		3.88	□□□□□ -1.79
ROX3	YBL093C	YOR008C-A	Q3E7B9	74 aa		3.88	□□□□□ -1.79
ROX3	YBL093C	UBC5	P15732	148 aa		3.87	□□□□□ -1.79
ROX3	YBL093C	YCR001W	P25347	104 aa		3.87	□□□□□ -1.79
ROX3	YBL093C	RPL16A	P26784	199 aa	Known RBP	3.87	□□□□□ -1.79
ROX3	YBL093C	APS1	P35181	156 aa		3.87	□□□□□ -1.79
ROX3	YBL093C	YKL070W	P36087	169 aa		3.87	□□□□□ -1.79
ROX3	YBL093C	YNL217W	P40152	326 aa		3.87	□□□□□ -1.79
ROX3	YBL093C	MSL1	P40567	111 aa	Predicted RBP	3.87	□□□□□ -1.79
ROX3	YBL093C	SAE3	P89114	91 aa		3.87	□□□□□ -1.79
ROX3	YBL093C	VAM10	Q08474	114 aa		3.87	□□□□□ -1.79
ROX3	YBL093C	YKL044W	P36092	106 aa		3.86	□□□□□ -1.79
ROX3	YBL093C	RPR2	P40571	144 aa		3.86	□□□□□ -1.79
ROX3	YBL093C	YGR240C-A	Q3E786	66 aa		3.86	□□□□□ -1.79
ROX3	YBL093C	YCR075W-A	Q3E830	75 aa		3.86	□□□□□ -1.79
ROX3	YBL093C	TRP1	P00912	224 aa		3.85	□□□□□ -1.79
ROX3	YBL093C	YDL022C-A	P0C5L6	82 aa		3.85	□□□□□ -1.79
ROX3	YBL093C	AUA1	P32450	94 aa		3.85	□□□□□ -1.79
ROX3	YBL093C	GIS2	P53849	153 aa	Known RBP RIP-Chip data	3.85	□□□□□ -1.79	not detected
ROX3	YBL093C	PMP3	P87284	55 aa		3.85	□□□□□ -1.79
ROX3	YBL093C	RDS3	Q06835	107 aa	Predicted RBP	3.85	□□□□□ -1.79
ROX3	YBL093C	PAU23	Q07987	124 aa		3.85	□□□□□ -1.79
ROX3	YBL093C	PAU17	Q12370	124 aa		3.85	□□□□□ -1.79
ROX3	YBL093C	DFM1	Q12743	341 aa	Known RBP	3.85	□□□□□ -1.79
ROX3	YBL093C	MRP49	P32388	137 aa		3.84	□□□□□ -1.79
ROX3	YBL093C	YBR209W	P38311	105 aa		3.83	□□□□□ -1.8
ROX3	YBL093C	YGL088W	P53151	121 aa		3.83	□□□□□ -1.8
ROX3	YBL093C	SGF11	Q03067	99 aa		3.83	□□□□□ -1.8
ROX3	YBL093C	ADH2	P00331	348 aa	Known RBP	3.82	□□□□□ -1.8
ROX3	YBL093C	RPL31A	P0C2H8	113 aa	Known RBP	3.82	□□□□□ -1.8
ROX3	YBL093C	RPS8A	P0CX39	200 aa	Known RBP	3.82	□□□□□ -1.8
ROX3	YBL093C	RPS8B	P0CX40	200 aa	Known RBP	3.82	□□□□□ -1.8
ROX3	YBL093C	AIM29	P36154	155 aa		3.82	□□□□□ -1.8
ROX3	YBL093C	YEL067C	P39978	195 aa		3.82	□□□□□ -1.8
ROX3	YBL093C	YEL008W	P40001	126 aa		3.82	□□□□□ -1.8
ROX3	YBL093C	YPL261C	Q08976	102 aa		3.82	□□□□□ -1.8
ROX3	YBL093C	YMR122W-A	Q3E842	84 aa		3.82	□□□□□ -1.8
ROX3	YBL093C	ATP15	P21306	62 aa		3.81	□□□□□ -1.8
ROX3	YBL093C	YKR041W	P36134	250 aa		3.81	□□□□□ -1.8
ROX3	YBL093C	YPL073C	P40323	161 aa		3.81	□□□□□ -1.8
ROX3	YBL093C	ARC15	P40518	154 aa	RIP-Chip data	3.81	□□□□□ -1.8	not detected
ROX3	YBL093C	YIL059C	P40520	121 aa		3.81	□□□□□ -1.8
ROX3	YBL093C	YNR077C	P53758	84 aa		3.81	□□□□□ -1.8
ROX3	YBL093C	AIM11	P87275	137 aa		3.81	□□□□□ -1.8
ROX3	YBL093C	YLR194C	Q05777	254 aa		3.81	□□□□□ -1.8
ROX3	YBL093C	MHR1	Q06630	226 aa		3.81	□□□□□ -1.8
ROX3	YBL093C	GLC8	P41818	229 aa		3.8	□□□□□ -1.8
ROX3	YBL093C	HAP3	P13434	144 aa		3.79	□□□□□ -1.8
ROX3	YBL093C	ERI1	P62651	68 aa	Known RBP	3.79	□□□□□ -1.8
ROX3	YBL093C	HAL1	Q01766	294 aa		3.79	□□□□□ -1.8
ROX3	YBL093C	YBR219C	P38317	127 aa		3.78	□□□□□ -1.8
ROX3	YBL093C	VTC1	P40046	129 aa	RIP-Chip data	3.78	□□□□□ -1.8	not detected
ROX3	YBL093C	MRPS12	P53732	153 aa		3.78	□□□□□ -1.8
ROX3	YBL093C	YLR363W-A	Q3E747	85 aa		3.78	□□□□□ -1.8
ROX3	YBL093C	YCL021W-A	Q96VH3	125 aa		3.78	□□□□□ -1.8
ROX3	YBL093C	YRA2	P36036	203 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
ROX3	YBL093C	SHU1	P38751	150 aa		3.77	□□□□□ -1.81
ROX3	YBL093C	RPF1	P38805	295 aa	Known RBP	3.77	□□□□□ -1.81
ROX3	YBL093C	YER085C	P40058	173 aa		3.77	□□□□□ -1.81
ROX3	YBL093C	CIN5	P40917	295 aa		3.77	□□□□□ -1.81
ROX3	YBL093C	IGO2	Q9P305	131 aa		3.77	□□□□□ -1.81
ROX3	YBL093C	RPL33A	P05744	107 aa	Known RBP	3.76	□□□□□ -1.81
ROX3	YBL093C	YAR029W	P39549	74 aa		3.76	□□□□□ -1.81
ROX3	YBL093C	PEX17	P40155	199 aa		3.76	□□□□□ -1.81
ROX3	YBL093C	RPL33B	P41056	107 aa	Known RBP	3.76	□□□□□ -1.81
ROX3	YBL093C	YFR057W	P43625	151 aa		3.76	□□□□□ -1.81
ROX3	YBL093C	YMR295C	Q03559	197 aa		3.76	□□□□□ -1.81
ROX3	YBL093C	OXA1	P39952	402 aa		3.75	□□□□□ -1.81
ROX3	YBL093C	ERG28	P40030	148 aa		3.75	□□□□□ -1.81
ROX3	YBL093C	SPC1	P46965	94 aa		3.75	□□□□□ -1.81
ROX3	YBL093C	CWC27	Q02770	301 aa		3.75	□□□□□ -1.81
ROX3	YBL093C	YLL066W-B	Q8TGJ7	56 aa		3.75	□□□□□ -1.81
ROX3	YBL093C	MBF1	O14467	151 aa	Known RBP	3.74	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms