RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C TY1A-ER1P0CX71 440 aa4.48□□□□□ -1.69
LDB7YBL006C TY1A-LR2P0CX72 440 aa4.48□□□□□ -1.69
LDB7YBL006C TY1A-PLP0CX73 440 aa4.48□□□□□ -1.69
LDB7YBL006C TY1A-JR1P0CX74 440 aa4.48□□□□□ -1.69
LDB7YBL006C TY1A-LR3P0CX75 440 aa4.48□□□□□ -1.69
LDB7YBL006C TY1A-ML2P0CX76 440 aa4.48□□□□□ -1.69
LDB7YBL006C PRE1P22141 198 aaKnown RBP4.48□□□□□ -1.69
LDB7YBL006C YAR029WP39549 74 aa4.48□□□□□ -1.69
LDB7YBL006C TOS6P48560 102 aa4.48□□□□□ -1.69
LDB7YBL006C YIL014C-AQ02598 104 aa4.48□□□□□ -1.69
LDB7YBL006C TY1A-GR1Q12085 440 aa4.48□□□□□ -1.69
LDB7YBL006C WIP1Q2V2P8 89 aa4.48□□□□□ -1.69
LDB7YBL006C TY1A-PR3Q6Q5H1 440 aaKnown RBP4.48□□□□□ -1.69
LDB7YBL006C YCL021W-AQ96VH3 125 aa4.48□□□□□ -1.69
LDB7YBL006C YMR175W-AQ3E766 64 aa4.47□□□□□ -1.69
LDB7YBL006C RPS22BQ3E7Y3 130 aaKnown RBP4.47□□□□□ -1.69
LDB7YBL006C TY1A-OLQ92392 440 aaKnown RBP4.47□□□□□ -1.69
LDB7YBL006C PEX22P39718 180 aa4.46□□□□□ -1.7
LDB7YBL006C YOR008C-AQ3E7B9 74 aa4.46□□□□□ -1.7
LDB7YBL006C YPR014CQ6B0W2 109 aa4.46□□□□□ -1.7
LDB7YBL006C POR1P04840 283 aaKnown RBP4.45□□□□□ -1.7
LDB7YBL006C CNB1P25296 175 aa4.45□□□□□ -1.7
LDB7YBL006C PCL2P25693 308 aa4.45□□□□□ -1.7
LDB7YBL006C RPL32P38061 130 aaKnown RBP4.45□□□□□ -1.7
LDB7YBL006C URM1P40554 99 aaPredicted RBP4.45□□□□□ -1.7
LDB7YBL006C YMR295CQ03559 197 aa4.45□□□□□ -1.7
LDB7YBL006C TPT1Q12272 230 aaKnown RBP4.45□□□□□ -1.7
LDB7YBL006C DDR48P18899 430 aaKnown RBP4.44□□□□□ -1.7
LDB7YBL006C VTC1P40046 129 aaRIP-Chip data4.44□□□□□ -1.7not detected
LDB7YBL006C YAL065CO13511 128 aa4.43□□□□□ -1.7
LDB7YBL006C APS1P35181 156 aa4.43□□□□□ -1.7
LDB7YBL006C PKR1Q03880 122 aaKnown RBP4.43□□□□□ -1.7
LDB7YBL006C YJL197C-AP0C5P0 93 aa4.42□□□□□ -1.7
LDB7YBL006C PAU19P0CE85 124 aa4.42□□□□□ -1.7
LDB7YBL006C PAU21P0CE86 164 aa4.42□□□□□ -1.7
LDB7YBL006C PAU22P0CE87 164 aa4.42□□□□□ -1.7
LDB7YBL006C HMRA2P0CY13 119 aa4.42□□□□□ -1.7
LDB7YBL006C PAU3P25610 124 aa4.42□□□□□ -1.7
LDB7YBL006C AIM19P40502 157 aa4.42□□□□□ -1.7
LDB7YBL006C MED7Q08278 222 aa4.42□□□□□ -1.7
LDB7YBL006C COA3Q3E7B2 85 aa4.42□□□□□ -1.7
LDB7YBL006C ECM12O13529 151 aa4.41□□□□□ -1.7
LDB7YBL006C YBL112CQ3E7Y4 105 aa4.4□□□□□ -1.71
LDB7YBL006C YDL241WQ07738 123 aa4.39□□□□□ -1.71
LDB7YBL006C RPL31AP0C2H8 113 aaKnown RBP4.38□□□□□ -1.71
LDB7YBL006C YKL070WP36087 169 aa4.38□□□□□ -1.71
LDB7YBL006C YGL118CP53132 145 aa4.38□□□□□ -1.71
LDB7YBL006C ERV14P53173 138 aa4.38□□□□□ -1.71
LDB7YBL006C HHO1P53551 258 aa4.38□□□□□ -1.71
LDB7YBL006C YLR112WQ12130 139 aa4.38□□□□□ -1.71
LDB7YBL006C YDR010CQ12426 110 aa4.38□□□□□ -1.71
LDB7YBL006C YGL041C-BQ3E750 60 aa4.38□□□□□ -1.71
LDB7YBL006C ATP15P21306 62 aa4.37□□□□□ -1.71
LDB7YBL006C GSP1P32835 219 aaKnown RBP4.37□□□□□ -1.71
LDB7YBL006C GSP2P32836 220 aaKnown RBP4.37□□□□□ -1.71
LDB7YBL006C NSE4P43124 402 aa4.37□□□□□ -1.71
LDB7YBL006C CWP2P43497 92 aa4.37□□□□□ -1.71
LDB7YBL006C CYT2Q00873 224 aa4.37□□□□□ -1.71
LDB7YBL006C YDR042CQ03205 200 aa4.37□□□□□ -1.71
LDB7YBL006C AQY2P0CD90 149 aa4.36□□□□□ -1.71
LDB7YBL006C COX14P39103 70 aa4.36□□□□□ -1.71
LDB7YBL006C CMC2Q3E7A4 109 aa4.36□□□□□ -1.71
LDB7YBL006C STF1P01098 86 aa4.34□□□□□ -1.71
LDB7YBL006C HAC1P41546 238 aa4.34□□□□□ -1.71
LDB7YBL006C TOA2P32774 122 aa4.33□□□□□ -1.72
LDB7YBL006C PAU16P35994 123 aa4.33□□□□□ -1.72
LDB7YBL006C OXA1P39952 402 aa4.33□□□□□ -1.72
LDB7YBL006C EOS1P53938 366 aa4.33□□□□□ -1.72
LDB7YBL006C HYP2P23301 157 aaKnown RBP4.32□□□□□ -1.72
LDB7YBL006C SHU1P38751 150 aa4.32□□□□□ -1.72
LDB7YBL006C RPF1P38805 295 aaKnown RBP4.32□□□□□ -1.72
LDB7YBL006C ZEO1Q08245 113 aa4.32□□□□□ -1.72
LDB7YBL006C Q0032Q9ZZX7 96 aa4.32□□□□□ -1.72
LDB7YBL006C RPL27BP0C2H7 136 aaKnown RBP4.31□□□□□ -1.72
LDB7YBL006C YER134CP40081 178 aa4.31□□□□□ -1.72
LDB7YBL006C IGD1P43598 195 aa4.31□□□□□ -1.72
LDB7YBL006C POP3P53833 195 aaPredicted RBP4.31□□□□□ -1.72
LDB7YBL006C AIM11P87275 137 aa4.31□□□□□ -1.72
LDB7YBL006C YMR103CQ04436 120 aa4.31□□□□□ -1.72
LDB7YBL006C MHR1Q06630 226 aa4.31□□□□□ -1.72
LDB7YBL006C PPT2Q12036 173 aa4.31□□□□□ -1.72
LDB7YBL006C YLR415CO13578 112 aa4.3□□□□□ -1.72
LDB7YBL006C MVB12P42939 101 aa4.3□□□□□ -1.72
LDB7YBL006C YGL193CP53097 103 aa4.3□□□□□ -1.72
LDB7YBL006C HTL1Q9URQ5 78 aa4.3□□□□□ -1.72
LDB7YBL006C GTT1P40582 234 aa4.29□□□□□ -1.72
LDB7YBL006C YFL019CP43576 117 aa4.29□□□□□ -1.72
LDB7YBL006C SMD1Q02260 146 aaPredicted RBP4.29□□□□□ -1.72
LDB7YBL006C YBL039W-BP0C268 59 aa4.28□□□□□ -1.72
LDB7YBL006C YDL022C-AP0C5L6 82 aa4.28□□□□□ -1.72
LDB7YBL006C RPL18AP0CX49 186 aaKnown RBP4.28□□□□□ -1.72
LDB7YBL006C RPL18BP0CX50 186 aaKnown RBP4.28□□□□□ -1.72
LDB7YBL006C FYV4P38783 130 aaPredicted RBP4.28□□□□□ -1.72
LDB7YBL006C PEX17P40155 199 aa4.27□□□□□ -1.73
LDB7YBL006C YGL149WP53116 101 aa4.27□□□□□ -1.73
LDB7YBL006C ABF2Q02486 183 aa4.27□□□□□ -1.73
LDB7YBL006C ADH1P00330 348 aaKnown RBP4.26□□□□□ -1.73
LDB7YBL006C YLR156WP0CE96 114 aa4.26□□□□□ -1.73
LDB7YBL006C YLR159WP0CE97 114 aa4.26□□□□□ -1.73
LDB7YBL006C YLR161WP0CE98 114 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms