RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 IPO4Q8TEX9 1081 aaKnown RBP18.45■□□□□ 0.54
PHGDH-230ENST00000641927 ISCUQ9H1K1 167 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 ABCB6Q9NP58 842 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 TMEM30AQ9NV96 361 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 AFF4Q9UHB7 1163 aaKnown RBP18.45■□□□□ 0.54
PHGDH-230ENST00000641927 TFR2Q9UP52 801 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 PPP2R2CQ9Y2T4 447 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 IRAK3Q9Y616 596 aa18.45■□□□□ 0.54
PHGDH-230ENST00000641927 F8VP50 259 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 RFXAPO00287 272 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 FSCN2O14926 492 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 ELF1P32519 619 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 LRIT3Q3SXY7 679 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 PTPN20Q4JDL3 420 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 CYP4A22Q5TCH4 519 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 PDE12Q6L8Q7 609 aaKnown RBP18.44■□□□□ 0.54
PHGDH-230ENST00000641927 VSTM1Q6UX27 236 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 PHLDB2Q86SQ0 1253 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 PHF13Q86YI8 300 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-230ENST00000641927 CTNNBL1Q8WYA6 563 aaPredicted RBP18.44■□□□□ 0.54
PHGDH-230ENST00000641927 CPXM1Q96SM3 734 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 CYP4F11Q9HBI6 524 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 ZKSCAN5Q9Y2L8 839 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 PRRG1O14668 218 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 SOAT2O75908 522 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 ABLIM3O94929 683 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 VNN2O95498 520 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 SPATA31D3P0C874 917 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 ATF2P15336 505 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 MMP8P22894 467 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 PLA2G4AP47712 749 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 VAV2P52735 878 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 DDR2Q16832 855 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 SPATA31D4Q6ZUB0 917 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 MCOLN2Q8IZK6 566 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 TXLNBQ8N3L3 684 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 ZMIZ2Q8NF64 920 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 ZNF653Q96CK0 615 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 THAP2Q9H0W7 228 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 CRISPLD1Q9H336 500 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 ZNF576Q9H609 170 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 LRRC4Q9HBW1 653 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 CSNK1G1Q9HCP0 422 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 TRMT1Q9NXH9 659 aaKnown RBP18.44■□□□□ 0.54
PHGDH-230ENST00000641927 MYO1AQ9UBC5 1043 aa18.44■□□□□ 0.54
PHGDH-230ENST00000641927 ANKRD62A6NC57 917 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 E5RJQ4 531 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 TRIM66O15016 1216 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 ZSCAN12O43309 604 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 ATMINO43313 823 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-230ENST00000641927 TGM5O43548 720 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 ERBB2P04626 1255 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 CALB1P05937 261 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 HAPLN1P10915 354 aaPredicted RBP18.43■□□□□ 0.54
PHGDH-230ENST00000641927 LCP1P13796 627 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 MAGEA11P43364 429 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 GPR15P49685 360 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 SNX16P57768 344 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 LIN9Q5TKA1 542 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 SDHAF4Q5VUM1 108 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 MON1BQ7L1V2 547 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 STK32AQ8WU08 396 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 C18orf8Q96DM3 657 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 TRIM11Q96F44 468 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 LMAN2LQ9H0V9 348 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 TJP2Q9UDY2 1190 aa18.43■□□□□ 0.54
PHGDH-230ENST00000641927 CDH23Q9H251 3354 aa18.42■□□□□ 0.54
PHGDH-230ENST00000641927 SEC24AO95486 1093 aa18.42■□□□□ 0.54
PHGDH-230ENST00000641927 TUFMP49411 452 aaKnown RBP18.42■□□□□ 0.54
PHGDH-230ENST00000641927 C1QBPQ07021 282 aaKnown RBP18.42■□□□□ 0.54
PHGDH-230ENST00000641927 KIF5AQ12840 1032 aa18.42■□□□□ 0.54
PHGDH-230ENST00000641927 IFRD2Q12894 506 aaPredicted RBP18.42■□□□□ 0.54
PHGDH-230ENST00000641927 RBM23Q86U06 439 aaKnown RBP18.42■□□□□ 0.54
PHGDH-230ENST00000641927 SIX6OS1Q8N1H7 587 aa18.42■□□□□ 0.54
PHGDH-230ENST00000641927 HSFY1Q96LI6 401 aa18.42■□□□□ 0.54
PHGDH-230ENST00000641927 SLC4A5Q9BY07 1137 aa18.42■□□□□ 0.54
PHGDH-230ENST00000641927 MIS12Q9H081 205 aa18.42■□□□□ 0.54
PHGDH-230ENST00000641927 STRIP2Q9ULQ0 834 aa18.42■□□□□ 0.54
PHGDH-230ENST00000641927 PTPRDP23468 1912 aa18.42■□□□□ 0.54
PHGDH-230ENST00000641927 A0A0U1RQJ8 604 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 RCCD1A6NED2 376 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 PER2O15055 1255 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 GLUD1P00367 558 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 RRM1P23921 792 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 ACADSBP45954 432 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 RPL10AP62906 217 aaKnown RBP18.41■□□□□ 0.54
PHGDH-230ENST00000641927 GPC5P78333 572 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 ADIGQ0VDE8 80 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 PTPROQ16827 1216 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 PRPF38BQ5VTL8 546 aaKnown RBP18.41■□□□□ 0.54
PHGDH-230ENST00000641927 SCUBE3Q8IX30 993 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 C17orf53Q8N3J3 647 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-230ENST00000641927 GPR152Q8TDT2 470 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 ATRIPQ8WXE1 791 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 VCPIP1Q96JH7 1222 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 LZTFL1Q9NQ48 299 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 CNOT8Q9UFF9 292 aaKnown RBP18.41■□□□□ 0.54
PHGDH-230ENST00000641927 CHORDC1Q9UHD1 332 aaPredicted RBP18.41■□□□□ 0.54
PHGDH-230ENST00000641927 INTUQ9ULD6 942 aa18.41■□□□□ 0.54
PHGDH-230ENST00000641927 GOLGA8SH3BPF8 625 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms