RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 APBA2Q99767 749 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 TSPYL1Q9H0U9 437 aa18.75■□□□□ 0.59
PHGDH-226ENST00000641756 A8MXQ7 604 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 E7EVH7 732 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 DNALI1O14645 258 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-226ENST00000641756 SPTLC1O15269 473 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 PDGFRBP09619 1106 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 STILQ15468 1287 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 PKDCCQ504Y2 493 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 C7orf31Q8N865 590 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 C9orf72Q96LT7 481 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 CFAP57Q96MR6 1250 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 SELENOSQ9BQE4 189 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 CALN1Q9BXU9 219 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 ITGAVP06756 1048 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 FGFR1P11362 822 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 ATP11AP98196 1134 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 PURAQ00577 322 aaKnown RBP18.74■□□□□ 0.59
PHGDH-226ENST00000641756 SOX4Q06945 474 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-226ENST00000641756 CCDC38Q502W7 563 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 FBXO47Q5MNV8 452 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 ZNF618Q5T7W0 954 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 BBS12Q6ZW61 710 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 SCUBE3Q8IX30 993 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 CCHCR1Q8TD31 782 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 CNPY3Q9BT09 278 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 FAM107BQ9H098 131 aa18.74■□□□□ 0.59
PHGDH-226ENST00000641756 PDCD11Q14690 1871 aaKnown RBP18.74■□□□□ 0.59
PHGDH-226ENST00000641756 PIRO00625 290 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 AGTP01019 485 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 CCDC130P13994 396 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 CTGFP29279 349 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 CRYBB1P53674 252 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-226ENST00000641756 GDF10P55107 478 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 MMRN1Q13201 1228 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 ACAP1Q15027 740 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 TAZQ16635 292 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 RGMBQ6NW40 437 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 OLFML1Q6UWY5 402 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 CROCCP2Q86T23 111 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 NLRP14Q86W24 1093 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 ARRDC4Q8NCT1 418 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 CMASQ8NFW8 434 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-226ENST00000641756 KATNAL1Q9BW62 490 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 B3GNT5Q9BYG0 378 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 HESX1Q9UBX0 185 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 IPPQ9Y573 584 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 CENPFP49454 3210 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 TRPM7Q96QT4 1865 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 GABBR2O75899 941 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 C6orf222P0C671 652 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-226ENST00000641756 LMO2P25791 158 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 ADORA2BP29275 332 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 PCK1P35558 622 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 CCDC14Q49A88 953 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 CYP4V2Q6ZWL3 525 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-226ENST00000641756 ZCCHC9Q8N567 271 aaKnown RBP18.73■□□□□ 0.59
PHGDH-226ENST00000641756 SLC35F5Q8WV83 523 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 KBTBD7Q8WVZ9 684 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 PKNOX2Q96KN3 472 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 RBM15Q96T37 977 aaKnown RBP eCLIP18.73■□□□□ 0.59
PHGDH-226ENST00000641756 ROPN1BQ9BZX4 212 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-226ENST00000641756 MIS12Q9H081 205 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 ROPN1Q9HAT0 212 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-226ENST00000641756 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.73■□□□□ 0.59
PHGDH-226ENST00000641756 CTNNAL1Q9UBT7 734 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 TPX2Q9ULW0 747 aaKnown RBP18.73■□□□□ 0.59
PHGDH-226ENST00000641756 EFR3BQ9Y2G0 817 aa18.73■□□□□ 0.59
PHGDH-226ENST00000641756 KPNA7A9QM74 516 aa18.72■□□□□ 0.59
PHGDH-226ENST00000641756 CD4P01730 458 aa18.72■□□□□ 0.59
PHGDH-226ENST00000641756 PECAM1P16284 738 aaPredicted RBP18.72■□□□□ 0.59
PHGDH-226ENST00000641756 CDH6P55285 790 aa18.72■□□□□ 0.59
PHGDH-226ENST00000641756 SAPCD2Q86UD0 394 aa18.72■□□□□ 0.59
PHGDH-226ENST00000641756 SMG8Q8ND04 991 aaKnown RBP18.72■□□□□ 0.59
PHGDH-226ENST00000641756 TRPV1Q8NER1 839 aa18.72■□□□□ 0.59
PHGDH-226ENST00000641756 CCT8L2Q96SF2 557 aa18.72■□□□□ 0.59
PHGDH-226ENST00000641756 SLC4A5Q9BY07 1137 aa18.72■□□□□ 0.59
PHGDH-226ENST00000641756 CNOT10Q9H9A5 744 aaKnown RBP18.72■□□□□ 0.59
PHGDH-226ENST00000641756 Q9Y3F1 56 aa18.72■□□□□ 0.59
PHGDH-226ENST00000641756 ANKRD65E5RJM6 399 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 PAPSS1O43252 624 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-226ENST00000641756 CHN1P15882 459 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 SLC6A3Q01959 620 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 CRHR2Q13324 411 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 HP1BP3Q5SSJ5 553 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-226ENST00000641756 TWF2Q6IBS0 349 aaKnown RBP18.71■□□□□ 0.59
PHGDH-226ENST00000641756 CYP4F22Q6NT55 531 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 SCYL2Q6P3W7 929 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 B4GALNT4Q76KP1 1039 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 UNC93AQ86WB7 457 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 TAB3Q8N5C8 712 aaPredicted RBP18.71■□□□□ 0.59
PHGDH-226ENST00000641756 MYCBPAPQ8TBZ2 947 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 ZNF473Q8WTR7 871 aaKnown RBP18.71■□□□□ 0.59
PHGDH-226ENST00000641756 SOCS4Q8WXH5 440 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 PCDH9Q9HC56 1237 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 ZFYVE28Q9HCC9 887 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 SAYSD1Q9NPB0 183 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 GPATCH2LQ9NWQ4 482 aa18.71■□□□□ 0.59
PHGDH-226ENST00000641756 RRP15Q9Y3B9 282 aaKnown RBP18.71■□□□□ 0.59
PHGDH-226ENST00000641756 EBAG9O00559 213 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms