RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 ADAT2Q7Z6V5 191 aaKnown RBP9.32□□□□□ -0.92
PHGDH-219ENST00000641513 TTC30AQ86WT1 665 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 XYLT1Q86Y38 959 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 CCDC50Q8IVM0 306 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 KLHL7Q8IXQ5 586 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 CRYBG2Q8N1P7 616 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 FAM76AQ8TAV0 307 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 RNPC3Q96LT9 517 aaKnown RBP9.32□□□□□ -0.92
PHGDH-219ENST00000641513 TMEM106CQ9BVX2 250 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 PLVAPQ9BX97 442 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 AP1M1Q9BXS5 423 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 FAM129AQ9BZQ8 928 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 CARD9Q9H257 536 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 C11orf49Q9H6J7 331 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 FAM204AQ9H8W3 233 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 PRDM5Q9NQX1 630 aaPredicted RBP9.32□□□□□ -0.92
PHGDH-219ENST00000641513 TBC1D13Q9NVG8 400 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.32□□□□□ -0.92
PHGDH-219ENST00000641513 LCMT1Q9UIC8 334 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 DSEQ9UL01 958 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 LTBP2Q14767 1821 aa9.32□□□□□ -0.92
PHGDH-219ENST00000641513 KIAA1671Q9BY89 1806 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 CLDN5O00501 218 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 HOXA2O43364 376 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 TADA2AO75478 443 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 DDHD2O94830 711 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 HEXIM1O94992 359 aaKnown RBP9.31□□□□□ -0.92
PHGDH-219ENST00000641513 UPP2O95045 317 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 PARNO95453 639 aaKnown RBP9.31□□□□□ -0.92
PHGDH-219ENST00000641513 FGGP02679 453 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 PFKMP08237 780 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 CLTBP09497 229 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 COL6A1P12109 1028 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 CAPN2P17655 700 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 DESP17661 470 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 PCSK1P29120 753 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 GBP1P32455 592 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 CTNNA1P35221 906 aaKnown RBP9.31□□□□□ -0.92
PHGDH-219ENST00000641513 GGCXP38435 758 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 GABRB2P47870 512 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 GJA8P48165 433 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 LMAN1P49257 510 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 CTCFP49711 727 aaPredicted RBP9.31□□□□□ -0.92
PHGDH-219ENST00000641513 MNX1P50219 401 aaPredicted RBP9.31□□□□□ -0.92
PHGDH-219ENST00000641513 GATMP50440 423 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 MTMR3Q13615 1198 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 PIGHQ14442 188 aaPredicted RBP9.31□□□□□ -0.92
PHGDH-219ENST00000641513 GPNMBQ14956 572 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 DCAF12L1Q5VU92 463 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 AADACL2Q6P093 401 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 PMF1Q6P1K2 205 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 SND1Q7KZF4 910 aaKnown RBP eCLIP9.31□□□□□ -0.927e-8■■■□□ 15.4
PHGDH-219ENST00000641513 LIMS2Q7Z4I7 341 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 ZNF280BQ86YH2 543 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 RHOT1Q8IXI2 618 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 IQCKQ8N0W5 287 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 THEM5Q8N1Q8 247 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 EMC1Q8N766 993 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 ANKRD52Q8NB46 1076 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 JOSD2Q8TAC2 188 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 ALG3Q92685 438 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 ARMC5Q96C12 935 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 LRRC45Q96CN5 670 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 PAWRQ96IZ0 340 aaKnown RBP9.31□□□□□ -0.92
PHGDH-219ENST00000641513 RUNDC3BQ96NL0 473 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 TOX2Q96NM4 488 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 RUFY1Q96T51 708 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 KRT12Q99456 494 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 FAM107BQ9H098 131 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 ELAC1Q9H777 363 aaKnown RBP9.31□□□□□ -0.92
PHGDH-219ENST00000641513 CDH9Q9ULB4 789 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 PRG3Q9Y2Y8 225 aaPredicted RBP9.31□□□□□ -0.92
PHGDH-219ENST00000641513 PCDHA3Q9Y5H8 950 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 ALPK3Q96L96 1907 aa9.31□□□□□ -0.92
PHGDH-219ENST00000641513 ATXN2Q99700 1313 aaKnown RBP9.31□□□□□ -0.92
PHGDH-219ENST00000641513 GOLGA6L10A0A0M3HER8 536 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 TCRBV5S1A1TA0A578 114 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 GOLGA6CA6NDK9 693 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 TBKBP1A7MCY6 615 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 F8W810 466 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 GABRDO14764 452 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 INPPL1O15357 1258 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 PSTPIP1O43586 416 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 GRAP2O75791 330 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 ITGB1P05556 798 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 FAM200BP0CF97 657 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 GOLGA6DP0CG33 693 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 HSPA1AP0DMV8 641 aaKnown RBP9.3□□□□□ -0.92
PHGDH-219ENST00000641513 HSPA1BP0DMV9 641 aaKnown RBP9.3□□□□□ -0.92
PHGDH-219ENST00000641513 GPD1P21695 349 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 PAX3P23760 479 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 TKTP29401 623 aaKnown RBP9.3□□□□□ -0.92
PHGDH-219ENST00000641513 MAN1A1P33908 653 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 RFC1P35251 1148 aaPredicted RBP9.3□□□□□ -0.92
PHGDH-219ENST00000641513 CETN2P41208 172 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 PEX5P50542 639 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 HNRNPH2P55795 449 aaKnown RBP9.3□□□□□ -0.92
PHGDH-219ENST00000641513 BCAR1P56945 870 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 TAS2R40P59535 323 aa9.3□□□□□ -0.92
PHGDH-219ENST00000641513 MRPS25P82663 173 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms