RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 SYDE1Q6ZW31 735 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-208ENST00000641023 SLC43A3Q8NBI5 491 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 FAM71BQ8TC56 605 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 RXFP2Q8WXD0 754 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 RAPGEF5Q92565 580 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 HSFY1Q96LI6 401 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 RUFY1Q96T51 708 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 TRPV6Q9H1D0 765 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 NEUROG2Q9H2A3 272 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 ZWILCHQ9H900 591 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 SNX24Q9Y343 169 aa18.16■□□□□ 0.5
PHGDH-208ENST00000641023 GAS8O95995 478 aa18.15■□□□□ 0.5
PHGDH-208ENST00000641023 GGCXP38435 758 aa18.15■□□□□ 0.5
PHGDH-208ENST00000641023 HSPA9P38646 679 aaKnown RBP18.15■□□□□ 0.5
PHGDH-208ENST00000641023 ACADSBP45954 432 aa18.15■□□□□ 0.5
PHGDH-208ENST00000641023 KAZNQ674X7 775 aa18.15■□□□□ 0.5
PHGDH-208ENST00000641023 OSTM1Q86WC4 334 aa18.15■□□□□ 0.5
PHGDH-208ENST00000641023 TSEN2Q8NCE0 465 aaKnown RBP18.15■□□□□ 0.5
PHGDH-208ENST00000641023 ATG4AQ8WYN0 398 aa18.15■□□□□ 0.5
PHGDH-208ENST00000641023 FMO2Q99518 471 aa18.15■□□□□ 0.5
PHGDH-208ENST00000641023 HNRNPABQ99729 332 aaKnown RBP18.15■□□□□ 0.5
PHGDH-208ENST00000641023 USP18Q9UMW8 372 aa18.15■□□□□ 0.5
PHGDH-208ENST00000641023 CASTOR2A6NHX0 329 aa18.14■□□□□ 0.5
PHGDH-208ENST00000641023 PAPSS1O43252 624 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-208ENST00000641023 KRT10P13645 584 aa18.14■□□□□ 0.5
PHGDH-208ENST00000641023 IBSPP21815 317 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-208ENST00000641023 MIPP30301 263 aa18.14■□□□□ 0.5
PHGDH-208ENST00000641023 UPP1Q16831 310 aa18.14■□□□□ 0.5
PHGDH-208ENST00000641023 KCTD19Q17RG1 926 aaPredicted RBP18.14■□□□□ 0.5
PHGDH-208ENST00000641023 KCNT1Q5JUK3 1230 aa18.14■□□□□ 0.5
PHGDH-208ENST00000641023 CFAP58Q5T655 872 aa18.14■□□□□ 0.5
PHGDH-208ENST00000641023 ANKS1BQ7Z6G8 1248 aa18.14■□□□□ 0.5
PHGDH-208ENST00000641023 PIWIL1Q96J94 861 aaKnown RBP18.14■□□□□ 0.5
PHGDH-208ENST00000641023 SAGE1Q9NXZ1 904 aa18.14■□□□□ 0.5
PHGDH-208ENST00000641023 DDX43Q9NXZ2 648 aaKnown RBP18.14■□□□□ 0.5
PHGDH-208ENST00000641023 EFR3BQ9Y2G0 817 aa18.14■□□□□ 0.5
PHGDH-208ENST00000641023 hCG_1818297A0A087WSY0 165 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 KBTBD13C9JR72 458 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 GRAP2O75791 330 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 POMCP01189 267 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 PTPN1P18031 435 aaKnown RBP18.14■□□□□ 0.49
PHGDH-208ENST00000641023 IL1R2P27930 398 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 FLT3P36888 993 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 CDKN2BP42772 138 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 RPL34P49207 117 aaKnown RBP18.14■□□□□ 0.49
PHGDH-208ENST00000641023 PLTPP55058 493 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 FAM193AP78312 1265 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 GRIK3Q13003 919 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 SMTNL2Q2TAL5 461 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 GOLGA6L1Q8N7Z2 621 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 ZBTB9Q96C00 473 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 CCDC114Q96M63 670 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 NCAPGQ9BPX3 1015 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 CACNG4Q9UBN1 327 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 PCSK1NQ9UHG2 260 aa18.14■□□□□ 0.49
PHGDH-208ENST00000641023 R3HDM2Q9Y2K5 976 aaKnown RBP18.14■□□□□ 0.49
PHGDH-208ENST00000641023 AGPSO00116 658 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 ARVCFO00192 962 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 POLR3GO15318 223 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-208ENST00000641023 SYF2O95926 243 aaKnown RBP18.13■□□□□ 0.49
PHGDH-208ENST00000641023 SDC4P31431 198 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 LMNB2Q03252 620 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 KRT17Q04695 432 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 KCTD6Q8NC69 237 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 ACSF2Q96CM8 615 aaPredicted RBP18.13■□□□□ 0.49
PHGDH-208ENST00000641023 B3GNT5Q9BYG0 378 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 FAM129AQ9BZQ8 928 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 ZDHHC18Q9NUE0 388 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 XPO1O14980 1071 aaKnown RBP18.13■□□□□ 0.49
PHGDH-208ENST00000641023 OPA1O60313 960 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 TRUB2O95900 331 aaKnown RBP18.13■□□□□ 0.49
PHGDH-208ENST00000641023 PAX3P23760 479 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 KDELR1P24390 212 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 ACAT1P24752 427 aaKnown RBP18.13■□□□□ 0.49
PHGDH-208ENST00000641023 SCNN1AP37088 669 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 RPL21P46778 160 aaKnown RBP18.13■□□□□ 0.49
PHGDH-208ENST00000641023 CALCOCO2Q13137 446 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 MTMR3Q13615 1198 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 ECHDC2Q86YB7 292 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 IQCKQ8N0W5 287 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 C3orf58Q8NDZ4 430 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 DUSP16Q9BY84 665 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 SEZ6LQ9BYH1 1024 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 RGS18Q9NS28 235 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 MTRF1LQ9UGC7 380 aaKnown RBP18.13■□□□□ 0.49
PHGDH-208ENST00000641023 PHF24Q9UPV7 400 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 TRIM17Q9Y577 477 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 PTCH2Q9Y6C5 1203 aa18.13■□□□□ 0.49
PHGDH-208ENST00000641023 DPYSL4O14531 572 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 PRPSAP2O60256 369 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 ATP2C2O75185 946 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 B3GAT3O94766 335 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 IGFBP6P24592 240 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-208ENST00000641023 ADCY2Q08462 1091 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 TUSC3Q13454 348 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 CCDC14Q49A88 953 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 DRICH1Q6PGQ1 229 aaPredicted RBP18.12■□□□□ 0.49
PHGDH-208ENST00000641023 SLC26A9Q7LBE3 791 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 ARCQ7LC44 396 aa18.12■□□□□ 0.49
PHGDH-208ENST00000641023 FUKQ8N0W3 1084 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms