RNA–Protein interactions for RNA: ENST00000640648.1

NECAP1-227, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-227ENST00000640648 GPC5P78333 572 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 CDK16Q00536 496 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 TRAP1Q12931 704 aaKnown RBP8.58□□□□□ -1.04
NECAP1-227ENST00000640648 TRIM28Q13263 835 aaKnown RBP8.58□□□□□ -1.04
NECAP1-227ENST00000640648 MKRN4PQ13434 485 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-227ENST00000640648 TBC1D25Q3MII6 688 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 ZFP69Q49AA0 526 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 SYDE2Q5VT97 1194 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 POTEHQ6S545 545 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 CDAN1Q8IWY9 1227 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 OR2B2Q9GZK3 357 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.58□□□□□ -1.04
NECAP1-227ENST00000640648 SEPT9Q9UHD8 586 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-227ENST00000640648 PCDHGA3Q9Y5H0 932 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 ILVBLA1L0T0 632 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 ZNF233A6NK53 670 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 BTNL10A8MVZ5 291 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 PPP1R3GB7ZBB8 358 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 KMOO15229 486 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 SNAP91O60641 907 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 WBP4O75554 376 aaKnown RBP8.58□□□□□ -1.04
NECAP1-227ENST00000640648 TFRCP02786 760 aaKnown RBP8.58□□□□□ -1.04
NECAP1-227ENST00000640648 CD58P19256 250 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 TRIM23P36406 574 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 HNRNPFP52597 415 aaKnown RBP8.58□□□□□ -1.04
NECAP1-227ENST00000640648 ERVK-24P63145 666 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 AMPD2Q01433 879 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 MAPK7Q13164 816 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 ALCAMQ13740 583 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 PRMT9Q6P2P2 845 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 ZNF420Q8TAQ5 688 aaPredicted RBP8.58□□□□□ -1.04
NECAP1-227ENST00000640648 FAR2Q96K12 515 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 STK33Q9BYT3 514 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 PRPF19Q9UMS4 504 aaKnown RBP8.58□□□□□ -1.04
NECAP1-227ENST00000640648 ING4Q9UNL4 249 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 DUSP10Q9Y6W6 482 aa8.58□□□□□ -1.04
NECAP1-227ENST00000640648 NPHP3-ACAD11A0A0J9YXS1 232 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CLDN25C9JDP6 229 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 WNT7AO00755 349 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 GJB6O95452 261 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 APOA4P06727 396 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 PLEKP08567 350 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CNTFP26441 200 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 BCAP31P51572 246 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 SLC29A2Q14542 456 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 DRAP1Q14919 205 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 MOGQ16653 247 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 ARMC4Q5T2S8 1044 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 MFSD5Q6N075 450 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 KRT74Q7RTS7 529 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 PRPF39Q86UA1 669 aaKnown RBP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 ZBED8Q8IZ13 594 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 ZNF786Q8N393 782 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 SLC30A5Q8TAD4 765 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CEP170P1Q96L14 293 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CAB39LQ9H9S4 337 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 JMJD4Q9H9V9 463 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 EFCAB1Q9HAE3 211 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 KRT84Q9NSB2 600 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 ANAPC7Q9UJX3 599 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 MKLN1Q9UL63 735 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 ERVK-11Q9UQG0 969 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 GIT1Q9Y2X7 761 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 SYNJ2BP-COX16A0A087WUM0 186 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 DDX3XO00571 662 aaKnown RBP eCLIP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 GRK2P25098 689 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CIITAP33076 1130 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 HALP42357 657 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 SLC9A3P48764 834 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 PEX3P56589 373 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 KCNJ2P63252 427 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CLPPQ16740 277 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 SPANXN2Q5MJ10 180 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 FKBP9P1Q75LS8 142 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 STK32CQ86UX6 486 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 RFX6Q8HWS3 928 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CLEC10AQ8IUN9 316 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 AMER2Q8N7J2 671 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 TDRD5Q8NAT2 981 aaKnown RBP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CALN1Q9BXU9 219 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 MYLK2Q9H1R3 596 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 VPS11Q9H270 941 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 COX16Q9P0S2 106 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 SPATA31A3Q5VYP0 1347 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 TEX51A0A1B0GUA7 166 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 NFIBO00712 420 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 ZBTB5O15062 677 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 GSTA4O15217 222 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CAMTA2O94983 1202 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CCNB1P14635 433 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 TAC1P20366 129 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 KNOP1Q1ED39 458 aaKnown RBP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 BNC2Q6ZN30 1099 aaPredicted RBP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 C4orf50Q6ZRC1 276 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 NOP9Q86U38 636 aaKnown RBP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 CCSER1Q9C0I3 900 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 DMGDHQ9UI17 866 aaKnown RBP8.57□□□□□ -1.04
NECAP1-227ENST00000640648 USP21Q9UK80 565 aa8.57□□□□□ -1.04
NECAP1-227ENST00000640648 TMEM98Q9Y2Y6 226 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms