RNA–Protein interactions for RNA: ENST00000640413.1

AP3S1-209, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 5 BASIC

Gene AP3S1, Length 489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-209ENST00000640413 ASIC5Q9NY37 505 aa4.49□□□□□ -1.69
AP3S1-209ENST00000640413 HEY2Q9UBP5 337 aa4.49□□□□□ -1.69
AP3S1-209ENST00000640413 FEZ2Q9UHY8 353 aaPredicted RBP4.49□□□□□ -1.69
AP3S1-209ENST00000640413 TTC3P53804 2025 aa4.49□□□□□ -1.69
AP3S1-209ENST00000640413 TLDC2A0PJX2 215 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 GCATO75600 419 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 VNN1O95497 513 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 HSD3B2P26439 372 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 E2F1Q01094 437 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 CYP1B1Q16678 543 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 KRTAP27-1Q3LI81 207 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 AWAT1Q58HT5 328 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 UBAP2Q5T6F2 1119 aaKnown RBP4.48□□□□□ -1.69
AP3S1-209ENST00000640413 Q6ZTC4 211 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 USP43Q70EL4 1123 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 BCDIN3DQ7Z5W3 292 aaKnown RBP4.48□□□□□ -1.69
AP3S1-209ENST00000640413 OSR1Q8TAX0 266 aaPredicted RBP4.48□□□□□ -1.69
AP3S1-209ENST00000640413 CAMK1GQ96NX5 476 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 CTAGE1Q96RT6 745 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 TFCP2L1Q9NZI6 479 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 MRFAP1Q9Y605 127 aa4.48□□□□□ -1.69
AP3S1-209ENST00000640413 UNC5CO95185 931 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 HDCP19113 662 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 ADORA2AP29274 412 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 HK3P52790 923 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 LY6KQ17RY6 165 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 GIMAP6Q6P9H5 292 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 MTHFD1LQ6UB35 978 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.47□□□□□ -1.69
AP3S1-209ENST00000640413 ZNF398Q8TD17 642 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 MAP4K1Q92918 833 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 THOC3Q96J01 351 aaKnown RBP4.47□□□□□ -1.69
AP3S1-209ENST00000640413 CCDC17Q96LX7 622 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 PUS7Q96PZ0 661 aaKnown RBP4.47□□□□□ -1.69
AP3S1-209ENST00000640413 PI4KBQ9UBF8 816 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 ZMYM2Q9UBW7 1377 aa4.47□□□□□ -1.69
AP3S1-209ENST00000640413 PRSS44E7EML9 344 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 TOMM40O96008 361 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 PRKCBP05771 671 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 CSF1RP07333 972 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 TYRP14679 529 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 ME1P48163 572 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 PDE6CP51160 858 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 ADKP55263 362 aaKnown RBP4.46□□□□□ -1.7
AP3S1-209ENST00000640413 PSG6Q00889 435 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 HYAL1Q12794 435 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 ODF1Q14990 250 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 NPY5RQ15761 445 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 AMOTQ4VCS5 1084 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 EFCAB2Q5VUJ9 269 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 SDE2Q6IQ49 451 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 PIM3Q86V86 326 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 CAND1Q86VP6 1230 aaKnown RBP4.46□□□□□ -1.7
AP3S1-209ENST00000640413 DDX42Q86XP3 938 aaKnown RBP eCLIP4.46□□□□□ -1.7
AP3S1-209ENST00000640413 OSCP1Q8WVF1 389 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 FYTTD1Q96QD9 318 aaKnown RBP4.46□□□□□ -1.7
AP3S1-209ENST00000640413 PRR25Q96S07 402 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 TRMOQ9BU70 441 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 LMBRD1Q9NUN5 540 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 TRHDEQ9UKU6 1024 aa4.46□□□□□ -1.7
AP3S1-209ENST00000640413 B4DGG1 531 aa4.45□□□□□ -1.7
AP3S1-209ENST00000640413 TLR2O60603 784 aa4.45□□□□□ -1.7
AP3S1-209ENST00000640413 CLSTN1O94985 981 aa4.45□□□□□ -1.7
AP3S1-209ENST00000640413 FTLP02792 175 aaPredicted RBP4.45□□□□□ -1.7
AP3S1-209ENST00000640413 CDKN2AP42771 156 aaKnown RBP4.45□□□□□ -1.7
AP3S1-209ENST00000640413 SYDE2Q5VT97 1194 aa4.45□□□□□ -1.7
AP3S1-209ENST00000640413 ZNF549Q6P9A3 640 aa4.45□□□□□ -1.7
AP3S1-209ENST00000640413 COLCA1Q6ZS62 124 aa4.45□□□□□ -1.7
AP3S1-209ENST00000640413 PNMA8AQ86V59 439 aaPredicted RBP4.45□□□□□ -1.7
AP3S1-209ENST00000640413 ZNF280BQ86YH2 543 aa4.45□□□□□ -1.7
AP3S1-209ENST00000640413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.45□□□□□ -1.78e-8■□□□□ 10.9
AP3S1-209ENST00000640413 PNISRQ8TF01 805 aaKnown RBP4.45□□□□□ -1.7
AP3S1-209ENST00000640413 CCDC8Q9H0W5 538 aaPredicted RBP4.45□□□□□ -1.7
AP3S1-209ENST00000640413 FAM234AQ9H0X4 552 aa4.45□□□□□ -1.7
AP3S1-209ENST00000640413 CXorf36Q9H7Y0 433 aa4.45□□□□□ -1.7
AP3S1-209ENST00000640413 BTBD19C9JJ37 291 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 SLC16A6O15403 523 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 GRPP07492 148 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 MYCLP12524 364 aaPredicted RBP4.44□□□□□ -1.7
AP3S1-209ENST00000640413 RHDQ02161 417 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 ID2Q02363 134 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 SRSF1Q07955 248 aaKnown RBP eCLIP4.44□□□□□ -1.7
AP3S1-209ENST00000640413 MYO1EQ12965 1108 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 SEC23BQ15437 767 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 THEMIS2Q5TEJ8 643 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 PNPOQ9NVS9 261 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 MCM8Q9UJA3 840 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 AMFRQ9UKV5 643 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 SHOC2Q9UQ13 582 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 HS3ST3B1Q9Y662 390 aa4.44□□□□□ -1.7
AP3S1-209ENST00000640413 SHTN1A0MZ66 631 aa4.43□□□□□ -1.7
AP3S1-209ENST00000640413 RNF8O76064 485 aa4.43□□□□□ -1.7
AP3S1-209ENST00000640413 FGAP02671 866 aa4.43□□□□□ -1.7
AP3S1-209ENST00000640413 PDCP20941 246 aa4.43□□□□□ -1.7
AP3S1-209ENST00000640413 MAP2K6P52564 334 aa4.43□□□□□ -1.7
AP3S1-209ENST00000640413 SOX8P57073 446 aa4.43□□□□□ -1.7
AP3S1-209ENST00000640413 ZIK1Q3SY52 487 aaPredicted RBP4.43□□□□□ -1.7
AP3S1-209ENST00000640413 NECAB2Q7Z6G3 386 aa4.43□□□□□ -1.7
AP3S1-209ENST00000640413 ANKRD13BQ86YJ7 626 aa4.43□□□□□ -1.7
AP3S1-209ENST00000640413 IZUMO1Q8IYV9 350 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms