RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PTK2Q05397 1052 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 PDE4CQ08493 712 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 IFRD2Q12894 506 aaPredicted RBP13.97□□□□□ -0.17
GTF3A-209ENST00000640289 CNGA2Q16280 664 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 TAF12Q16514 161 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 SARM1Q6SZW1 724 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 LCLAT1Q6UWP7 414 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 DENND5BQ6ZUT9 1274 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 GPRIN1Q7Z2K8 1008 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 ITIH5Q86UX2 942 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 ANKRD52Q8NB46 1076 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 ATXN2LQ8WWM7 1075 aaKnown RBP13.97□□□□□ -0.17
GTF3A-209ENST00000640289 ZNF606Q8WXB4 792 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 BAP1Q92560 729 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 SPATA17Q96L03 361 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 TRIM5Q9C035 493 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 ASAH2Q9NR71 780 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 HESX1Q9UBX0 185 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 ASB3Q9Y575 518 aa13.97□□□□□ -0.17
GTF3A-209ENST00000640289 MTCL1Q9Y4B5 1905 aaKnown RBP13.96□□□□□ -0.17
GTF3A-209ENST00000640289 M0QYV0 167 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 TNFRSF10BO14763 440 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 CYP11B1P15538 503 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 STAT1P42224 750 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 SLC5A3P53794 718 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 BCAT1P54687 386 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 BST2Q10589 180 aaKnown RBP13.96□□□□□ -0.17
GTF3A-209ENST00000640289 STILQ15468 1287 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 AAK1Q2M2I8 961 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 PUS10Q3MIT2 529 aaKnown RBP13.96□□□□□ -0.17
GTF3A-209ENST00000640289 PKDCCQ504Y2 493 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 PRSS36Q5K4E3 855 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 TAF3Q5VWG9 929 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 DENND1BQ6P3S1 775 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 GAREM2Q75VX8 874 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 PDZD4Q76G19 769 aaPredicted RBP13.96□□□□□ -0.17
GTF3A-209ENST00000640289 GET4Q7L5D6 327 aaPredicted RBP13.96□□□□□ -0.17
GTF3A-209ENST00000640289 SCAMP5Q8TAC9 235 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 ITFG1Q8TB96 612 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 ING5Q8WYH8 240 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 SECISBP2LQ93073 1101 aaKnown RBP13.96□□□□□ -0.17
GTF3A-209ENST00000640289 NECTIN4Q96NY8 510 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 ASB2Q96Q27 587 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 IL21Q9HBE4 155 aa13.96□□□□□ -0.17
GTF3A-209ENST00000640289 A0A1W2PRU2 124 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 LRRC53A6NM62 1247 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 MED7O43513 233 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 MOSPD3O75425 235 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 FSHRP23945 695 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 GABRR2P28476 465 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 PDE6CP51160 858 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 EPHA5P54756 1037 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 ARID5AQ03989 594 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 CYP4A22Q5TCH4 519 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 SMYD5Q6GMV2 418 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 POTEHQ6S545 545 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 NOP9Q86U38 636 aaKnown RBP13.95□□□□□ -0.18
GTF3A-209ENST00000640289 PIGZQ86VD9 579 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 VSTM4Q8IW00 320 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.95□□□□□ -0.18
GTF3A-209ENST00000640289 NUP93Q8N1F7 819 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 SHKBP1Q8TBC3 707 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 CPLX3Q8WVH0 158 aa13.95□□□□□ -0.18
GTF3A-209ENST00000640289 ITIH6Q6UXX5 1313 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 FAM170AA1A519 330 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 XPO1O14980 1071 aaKnown RBP13.94□□□□□ -0.18
GTF3A-209ENST00000640289 TADA3O75528 432 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 F11P03951 625 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 GYPCP04921 128 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 BMP1P13497 986 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 CEBPBP17676 345 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 GPD2P43304 727 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 RGS7P49802 495 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 BPIFB4P59827 614 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 CYP4F8P98187 520 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 TEAD2Q15562 447 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 FIGNQ5HY92 759 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 STXBP5Q5T5C0 1151 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 E4F1Q66K89 784 aaPredicted RBP13.94□□□□□ -0.18
GTF3A-209ENST00000640289 PMF1Q6P1K2 205 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 TMEM150AQ86TG1 271 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 PASD1Q8IV76 773 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 EPS8L1Q8TE68 723 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 SLC20A1Q8WUM9 679 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 SLC35F5Q8WV83 523 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 DDX1Q92499 740 aaKnown RBP13.94□□□□□ -0.18
GTF3A-209ENST00000640289 TRMT2BQ96GJ1 504 aaKnown RBP13.94□□□□□ -0.18
GTF3A-209ENST00000640289 RPGRIP1Q96KN7 1286 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 MYRFLQ96LU7 910 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 CEP295NLQ96MC4 621 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 MYADMQ96S97 322 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 NUP58Q9BVL2 599 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 TTLL2Q9BWV7 592 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 PHF7Q9BWX1 381 aaPredicted RBP13.94□□□□□ -0.18
GTF3A-209ENST00000640289 ATXN3LQ9H3M9 355 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 AVENQ9NQS1 362 aaPredicted RBP13.94□□□□□ -0.18
GTF3A-209ENST00000640289 CYTH4Q9UIA0 394 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 FAM50BQ9Y247 325 aa13.94□□□□□ -0.18
GTF3A-209ENST00000640289 MRPS23Q9Y3D9 190 aaKnown RBP13.94□□□□□ -0.18
GTF3A-209ENST00000640289 PTPRDP23468 1912 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms