RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 ATF4P18848 351 aaPredicted RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 CST5P28325 142 aaPredicted RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 ERCC5P28715 1186 aaPredicted RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 GNA11P29992 359 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 HOXD13P35453 343 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 SREBF1P36956 1147 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 STAT6P42226 847 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 FXR1P51114 621 aaKnown RBP eCLIP6.63□□□□□ -1.35
ATM-229ENST00000639953 COPB1P53618 953 aaKnown RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 RPL11P62913 178 aaKnown RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 NKX3-2P78367 333 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 SP4Q02446 784 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 RBL2Q08999 1139 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 PRSS53Q2L4Q9 553 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 HSDL1Q3SXM5 330 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 TRIM60Q495X7 471 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 SV2CQ496J9 727 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 CELF3Q5SZQ8 465 aaKnown RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 ZNF658Q5TYW1 1059 aaPredicted RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 ANKRD40Q6AI12 368 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 TTI2Q6NXR4 508 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 TOGARAM2Q6ZUX3 1019 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 DHX37Q8IY37 1157 aaKnown RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 TRIML1Q8N9V2 468 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 RCBTB1Q8NDN9 531 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 ETNPPLQ8TBG4 499 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 DNAJC19Q96DA6 116 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 TRMT2BQ96GJ1 504 aaKnown RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 PPP1R13BQ96KQ4 1090 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 SPATA33Q96N06 139 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 GSDMAQ96QA5 445 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 MXRA8Q9BRK3 442 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 HTATIP2Q9BUP3 242 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 TRIM9Q9C026 710 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 NAT10Q9H0A0 1025 aaKnown RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 VPS16Q9H269 839 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 LIMA1Q9UHB6 759 aaKnown RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 CNOT11Q9UKZ1 510 aaKnown RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 ZMYND8Q9ULU4 1186 aaPredicted RBP6.63□□□□□ -1.35
ATM-229ENST00000639953 TFR2Q9UP52 801 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 INVSQ9Y283 1065 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 ATP11BQ9Y2G3 1177 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 Q9Y3F1 56 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 UBIAD1Q9Y5Z9 338 aa6.63□□□□□ -1.35
ATM-229ENST00000639953 CYP3A7-CYP3A51PA0A087WV96 503 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 H0YGN5 161 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 STAM2O75886 525 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 RHOBTB3O94955 611 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 SERPINC1P01008 464 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 FOSP01100 380 aaPredicted RBP6.62□□□□□ -1.35
ATM-229ENST00000639953 MMP3P08254 477 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 ZNF286BP0CG31 522 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 LCP1P13796 627 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 TNNT1P13805 278 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 KCNA2P16389 499 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 CAPN2P17655 700 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 CYP3A7P24462 503 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 HOXC12P31275 282 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 ICAM3P32942 547 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 UBA7P41226 1012 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 CPT1AP50416 773 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 ITGA1P56199 1179 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 ADAM17P78536 824 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 PURAQ00577 322 aaKnown RBP6.62□□□□□ -1.35
ATM-229ENST00000639953 MTMR1Q13613 665 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 CALCRLQ16602 461 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 CR1LQ2VPA4 569 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 PRR31Q5SQ13 230 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 IQCEQ6IPM2 695 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 XRRA1Q6P2D8 792 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 PCSK9Q8NBP7 692 aaKnown RBP6.62□□□□□ -1.35
ATM-229ENST00000639953 TXNDC5Q8NBS9 432 aaKnown RBP6.62□□□□□ -1.35
ATM-229ENST00000639953 GIMAP8Q8ND71 665 aaPredicted RBP6.62□□□□□ -1.35
ATM-229ENST00000639953 MYRIPQ8NFW9 859 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 RAD54LQ92698 747 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 DIO2Q92813 273 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 C16orf45Q96MC5 204 aaPredicted RBP6.62□□□□□ -1.35
ATM-229ENST00000639953 DESI2Q9BSY9 194 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 GLT8D2Q9H1C3 349 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 MRPL44Q9H9J2 332 aaKnown RBP6.62□□□□□ -1.35
ATM-229ENST00000639953 MLXIPQ9HAP2 919 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 SLC39A2Q9NP94 309 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 KCNMB3Q9NPA1 279 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 JADE2Q9NQC1 790 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 STARD7Q9NQZ5 370 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 KCND1Q9NSA2 647 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 SMPD4Q9NXE4 827 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 WRAP73Q9P2S5 460 aaPredicted RBP6.62□□□□□ -1.35
ATM-229ENST00000639953 LRWD1Q9UFC0 647 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 STRIP2Q9ULQ0 834 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 REXO2Q9Y3B8 237 aaKnown RBP6.62□□□□□ -1.35
ATM-229ENST00000639953 PCDHA2Q9Y5H9 948 aa6.62□□□□□ -1.35
ATM-229ENST00000639953 SCN10AQ9Y5Y9 1956 aa6.61□□□□□ -1.35
ATM-229ENST00000639953 IGLV3-22A0A075B6J6 115 aa6.61□□□□□ -1.35
ATM-229ENST00000639953 A0A0U1RQG5 324 aaPredicted RBP6.61□□□□□ -1.35
ATM-229ENST00000639953 MROH6A6NGR9 719 aa6.61□□□□□ -1.35
ATM-229ENST00000639953 DDX39AO00148 427 aaKnown RBP6.61□□□□□ -1.35
ATM-229ENST00000639953 EPHB6O15197 1021 aa6.61□□□□□ -1.35
ATM-229ENST00000639953 MSH4O15457 936 aa6.61□□□□□ -1.35
ATM-229ENST00000639953 ZEB2O60315 1214 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms