RNA–Protein interactions for RNA: ENST00000639053.1

SPIN3-219, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,778 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-219ENST00000639053 BTG3Q14201 252 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-219ENST00000639053 PKDCCQ504Y2 493 aa16.05■□□□□ 0.16
SPIN3-219ENST00000639053 PSRC1Q6PGN9 363 aaPredicted RBP16.05■□□□□ 0.16
SPIN3-219ENST00000639053 SLC2A14Q8TDB8 520 aa16.05■□□□□ 0.16
SPIN3-219ENST00000639053 DPF3Q92784 378 aa16.05■□□□□ 0.16
SPIN3-219ENST00000639053 TMEM209Q96SK2 561 aa16.05■□□□□ 0.16
SPIN3-219ENST00000639053 CNOT8Q9UFF9 292 aaKnown RBP16.05■□□□□ 0.16
SPIN3-219ENST00000639053 CDH9Q9ULB4 789 aa16.05■□□□□ 0.16
SPIN3-219ENST00000639053 ALG6Q9Y672 507 aa16.05■□□□□ 0.16
SPIN3-219ENST00000639053 MYBPHLA2RUH7 354 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 BHMG1C9JSJ3 638 aaPredicted RBP16.04■□□□□ 0.16
SPIN3-219ENST00000639053 CLDN5O00501 218 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 KRIT1O00522 736 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 MMP8P22894 467 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 RRM1P23921 792 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 PCSK1P29120 753 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 C1QBPQ07021 282 aaKnown RBP16.04■□□□□ 0.16
SPIN3-219ENST00000639053 CUL1Q13616 776 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 PTPN20Q4JDL3 420 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 SPOUT1Q5T280 376 aaKnown RBP16.04■□□□□ 0.16
SPIN3-219ENST00000639053 FAM171A1Q5VUB5 890 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 FUT10Q6P4F1 479 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 ERICH1Q86X53 443 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 CMTR2Q8IYT2 770 aaKnown RBP16.04■□□□□ 0.16
SPIN3-219ENST00000639053 FUKQ8N0W3 1084 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 THEM5Q8N1Q8 247 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 OR10T2Q8NGX3 314 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 B3GALT6Q96L58 329 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 YME1L1Q96TA2 773 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 HESX1Q9UBX0 185 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 TJP2Q9UDY2 1190 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 MRPL42Q9Y6G3 142 aaKnown RBP16.04■□□□□ 0.16
SPIN3-219ENST00000639053 PTPRSQ13332 1948 aa16.04■□□□□ 0.16
SPIN3-219ENST00000639053 TULP2O00295 520 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 RAD51CO43502 376 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 GLI1P08151 1106 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 CTNNA2P26232 953 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 ALDH7A1P49419 539 aaKnown RBP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 YWHAHQ04917 246 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 PAQR9Q6ZVX9 377 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 SND1Q7KZF4 910 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 TAS1R1Q7RTX1 841 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 MAATS1Q7Z4T9 603 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 CEP57Q86XR8 500 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 CCDC26Q8TAB7 109 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 CPXM1Q96SM3 734 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 HNRNPABQ99729 332 aaKnown RBP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 ACBD6Q9BR61 282 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 B3GNT5Q9BYG0 378 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 MKI67P46013 3256 aaKnown RBP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 SF3B1O75533 1304 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 GOLGA6L10A0A0M3HER8 536 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 SYN3O14994 580 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 GUCY2DQ02846 1103 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 PDE4CQ08493 712 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 PDCLQ13371 301 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 INTS6LQ5JSJ4 861 aaKnown RBP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 VARS2Q5ST30 1063 aaKnown RBP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 CYP4A22Q5TCH4 519 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 LIN9Q5TKA1 542 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 KCNT2Q6UVM3 1135 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 GSPT2Q8IYD1 628 aaKnown RBP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 MREGQ8N565 214 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 ANKRD52Q8NB46 1076 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 ZNF564Q8TBZ8 553 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 HERVK_113Q902F9 699 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 VCPIP1Q96JH7 1222 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 RNPC3Q96LT9 517 aaKnown RBP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 PKMYT1Q99640 499 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 LBHD1Q9BQE6 289 aaPredicted RBP16.03■□□□□ 0.16
SPIN3-219ENST00000639053 MED10Q9BTT4 135 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 NUP85Q9BW27 656 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 EPB41L5Q9HCM4 733 aa16.03■□□□□ 0.16
SPIN3-219ENST00000639053 CCDC66A2RUB6 948 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 SART1O43290 800 aaKnown RBP16.02■□□□□ 0.15
SPIN3-219ENST00000639053 OAZ2O95190 189 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 GJB5O95377 273 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 ERBB2P04626 1255 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 FGFR3P22607 806 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 RGS7P49802 495 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 RNASE9P60153 205 aaKnown RBP16.02■□□□□ 0.15
SPIN3-219ENST00000639053 DCAF12L1Q5VU92 463 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 ALS2CLQ60I27 953 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 LRRTM3Q86VH5 581 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 KLHL7Q8IXQ5 586 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 MYCBPAPQ8TBZ2 947 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 CD101Q93033 1021 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 PCED1BQ96HM7 432 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 ZNF558Q96NG5 402 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 TMLHEQ9NVH6 421 aa16.02■□□□□ 0.15
SPIN3-219ENST00000639053 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.02■□□□□ 0.15
SPIN3-219ENST00000639053 PIK3R2O00459 728 aa16.01■□□□□ 0.15
SPIN3-219ENST00000639053 POLR3GO15318 223 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-219ENST00000639053 GJB6O95452 261 aa16.01■□□□□ 0.15
SPIN3-219ENST00000639053 FGGP02679 453 aa16.01■□□□□ 0.15
SPIN3-219ENST00000639053 CALB1P05937 261 aa16.01■□□□□ 0.15
SPIN3-219ENST00000639053 SETSIPP0DME0 302 aa16.01■□□□□ 0.15
SPIN3-219ENST00000639053 BCAT1P54687 386 aa16.01■□□□□ 0.15
SPIN3-219ENST00000639053 HTRA4P83105 476 aaPredicted RBP16.01■□□□□ 0.15
SPIN3-219ENST00000639053 BST2Q10589 180 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms