RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 CDC25BP30305 580 aa20.53■□□□□ 0.88
HLA-A-209ENST00000638375 KRT9P35527 623 aa20.53■□□□□ 0.88
HLA-A-209ENST00000638375 BST2Q10589 180 aaKnown RBP20.53■□□□□ 0.88
HLA-A-209ENST00000638375 ASIC2Q16515 512 aa20.53■□□□□ 0.88
HLA-A-209ENST00000638375 MEA1Q16626 185 aa20.53■□□□□ 0.88
HLA-A-209ENST00000638375 GPRIN1Q7Z2K8 1008 aa20.53■□□□□ 0.88
HLA-A-209ENST00000638375 GPR149Q86SP6 731 aa20.53■□□□□ 0.88
HLA-A-209ENST00000638375 SMRP1Q8NCR6 262 aa20.53■□□□□ 0.88
HLA-A-209ENST00000638375 ZNF397Q8NF99 534 aaPredicted RBP20.53■□□□□ 0.88
HLA-A-209ENST00000638375 SMG7Q92540 1137 aaKnown RBP20.53■□□□□ 0.88
HLA-A-209ENST00000638375 SECISBP2LQ93073 1101 aaKnown RBP20.53■□□□□ 0.88
HLA-A-209ENST00000638375 ADAM7Q9H2U9 754 aa20.53■□□□□ 0.88
HLA-A-209ENST00000638375 HCFC1R1Q9NWW0 138 aa20.53■□□□□ 0.88
HLA-A-209ENST00000638375 DNMT3BQ9UBC3 853 aaKnown RBP20.53■□□□□ 0.88
HLA-A-209ENST00000638375 CD207Q9UJ71 328 aa20.53■□□□□ 0.88
HLA-A-209ENST00000638375 BRWD1Q9NSI6 2320 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 SLC38A8A6NNN8 435 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 TNFRSF10BO14763 440 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 MFAP3LO75121 409 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 XYLBO75191 536 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 MMEP08473 750 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 SETSIPP0DME0 302 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 HMGA1P17096 107 aaKnown RBP20.52■□□□□ 0.88
HLA-A-209ENST00000638375 CHRNB2P17787 502 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 GPD2P43304 727 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 VEPH1Q14D04 833 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 DNAJB7Q7Z6W7 309 aaPredicted RBP20.52■□□□□ 0.88
HLA-A-209ENST00000638375 PIGZQ86VD9 579 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 PASD1Q8IV76 773 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 FMNL3Q8IVF7 1028 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 HS6ST3Q8IZP7 471 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 OLIG1Q8TAK6 271 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 SLC35F5Q8WV83 523 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 SYN2Q92777 582 aaPredicted RBP20.52■□□□□ 0.88
HLA-A-209ENST00000638375 PSMG2Q969U7 264 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 CEP295NLQ96MC4 621 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 ZNF512Q96ME7 567 aaPredicted RBP20.52■□□□□ 0.88
HLA-A-209ENST00000638375 NUCKS1Q9H1E3 243 aaKnown RBP20.52■□□□□ 0.88
HLA-A-209ENST00000638375 COG5Q9UP83 839 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 ASB3Q9Y575 518 aa20.52■□□□□ 0.88
HLA-A-209ENST00000638375 EYSQ5T1H1 3165 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 XPO1O14980 1071 aaKnown RBP20.51■□□□□ 0.87
HLA-A-209ENST00000638375 CCDC172P0C7W6 258 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 PRKCIP41743 596 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 SLC5A3P53794 718 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 ADKP55263 362 aaKnown RBP20.51■□□□□ 0.87
HLA-A-209ENST00000638375 USP46P62068 366 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 NTHL1P78549 312 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 FMO1Q01740 532 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 CDR2Q01850 454 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 ITIH3Q06033 890 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 ARID5BQ14865 1188 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 HGSNATQ68CP4 663 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 DENND5BQ6ZUT9 1274 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 GRASPQ7Z6J2 395 aaPredicted RBP20.51■□□□□ 0.87
HLA-A-209ENST00000638375 ITIH5Q86UX2 942 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 ZNF677Q86XU0 584 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 TMC8Q8IU68 726 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 ELMOD1Q8N336 334 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 WDTC1Q8N5D0 677 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 DNAJC7Q99615 494 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 SYT11Q9BT88 431 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 LRRC3Q9BY71 257 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 PIDD1Q9HB75 910 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 ZNF334Q9HCZ1 680 aaPredicted RBP20.51■□□□□ 0.87
HLA-A-209ENST00000638375 PNPLA8Q9NP80 782 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 CYTH4Q9UIA0 394 aa20.51■□□□□ 0.87
HLA-A-209ENST00000638375 TPM1P09493 284 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 CSH1P0DML2 217 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 CSH2P0DML3 217 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 SKILP12757 684 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 PLA2G4AP47712 749 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 SLC8A3P57103 927 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 GSE1Q14687 1217 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 PMF1Q6P1K2 205 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 CYP26C1Q6V0L0 522 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 NUP93Q8N1F7 819 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 SCAMP5Q8TAC9 235 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 CORO1BQ9BR76 489 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 UBXN6Q9BZV1 441 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 LHX5Q9H2C1 402 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 HAUS4Q9H6D7 363 aa20.5■□□□□ 0.87
HLA-A-209ENST00000638375 MAGED2Q9UNF1 606 aaPredicted RBP20.5■□□□□ 0.87
HLA-A-209ENST00000638375 SPTBN5Q9NRC6 3674 aaKnown RBP20.49■□□□□ 0.87
HLA-A-209ENST00000638375 PATJQ8NI35 1801 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 GRXCR2A6NFK2 248 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 AKR1B15C9JRZ8 316 aaPredicted RBP20.49■□□□□ 0.87
HLA-A-209ENST00000638375 NRG2O14511 850 aaPredicted RBP20.49■□□□□ 0.87
HLA-A-209ENST00000638375 GABBR2O75899 941 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 RHOP08100 348 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 PTPN2P17706 415 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 HNRNPH3P31942 346 aaKnown RBP20.49■□□□□ 0.87
HLA-A-209ENST00000638375 CDH5P33151 784 aaPredicted RBP20.49■□□□□ 0.87
HLA-A-209ENST00000638375 RGS7P49802 495 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 MRE11P49959 708 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 EPHA5P54756 1037 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 KLHL30Q0D2K2 578 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 RAB41Q5JT25 222 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 CES5AQ6NT32 575 aa20.49■□□□□ 0.87
HLA-A-209ENST00000638375 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms