RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 LRRC6Q86X45 466 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 GYG1P46976 350 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 PABPC5Q96DU9 382 aaKnown RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 ZCCHC17Q9NP64 241 aaKnown RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 KLHL28Q9NXS3 571 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 BCLAF3A2AJT9 711 aaKnown RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 TRIM3O75382 744 aaPredicted RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 HNRNPH1P31943 449 aaKnown RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 GCLCP48506 637 aaPredicted RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 PRMT9Q6P2P2 845 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 SPATA2LQ8IUW3 424 aaPredicted RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 SPATA4Q8NEY3 305 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 CALB2P22676 271 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 CCDC153Q494R4 210 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 LINC00301Q8NCQ3 95 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 OTUD5Q96G74 571 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 AP1S3Q96PC3 154 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 PIGSQ96S52 555 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 SLC39A10Q9ULF5 831 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 YEATS2Q9ULM3 1422 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 NEURL1BA8MQ27 555 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 NFX1Q12986 1120 aaKnown RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 MED15Q96RN5 788 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 MIEF1Q9NQG6 463 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 MYH6P13533 1939 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 TCF4P15884 667 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 HOXA13P31271 388 aaPredicted RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 GEMIN4P57678 1058 aaKnown RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 PIGHQ14442 188 aaPredicted RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 LRRC17Q8N6Y2 441 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 EPB41L4BQ9H329 900 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 C12orf4Q9NQ89 552 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 DDX18Q9NVP1 670 aaKnown RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 GSTK1Q9Y2Q3 226 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 LSM1O15116 133 aaKnown RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 NQO1P15559 274 aaKnown RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 DSG3P32926 999 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 FAM83BQ5T0W9 1011 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 FBXO31Q5XUX0 539 aaPredicted RBP13.57□□□□□ -0.24
UBE3A-228ENST00000638155 TSPAN14Q8NG11 270 aa13.57□□□□□ -0.24
UBE3A-228ENST00000638155 LOC100653049A0A140TA62 436 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 QPRTQ15274 297 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 NUAK2Q9H093 628 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 CATSPERBQ9H7T0 1116 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 RCOR1Q9UKL0 485 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 ASB14A6NK59 587 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 H3BN98 237 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 SLC16A2P36021 539 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 PTSQ03393 145 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 MIGA2Q7L4E1 593 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 OXCT2Q9BYC2 517 aaPredicted RBP13.56□□□□□ -0.24
UBE3A-228ENST00000638155 PRKD2Q9BZL6 878 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 CAB39LQ9H9S4 337 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 STX16-NPEPL1H3BU86 382 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 STX16O14662 325 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 RBMXL2O75526 392 aaKnown RBP13.56□□□□□ -0.24
UBE3A-228ENST00000638155 SKAP2O75563 359 aaPredicted RBP13.56□□□□□ -0.24
UBE3A-228ENST00000638155 TCEA3O75764 348 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 CHRM3P20309 590 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 AP3M2P53677 418 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 CACNB2Q08289 660 aaPredicted RBP13.56□□□□□ -0.24
UBE3A-228ENST00000638155 DDX39BQ13838 428 aaKnown RBP13.56□□□□□ -0.24
UBE3A-228ENST00000638155 IZUMO2Q6UXV1 221 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 FAM228AQ86W67 206 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 SH2D3CQ8N5H7 860 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 GOLPH3Q9H4A6 298 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 STAT3P40763 770 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 SWI5Q1ZZU3 235 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 ATP1A3P13637 1013 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 CCNG1P51959 295 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 PDK1Q15118 436 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 IL31Q6EBC2 164 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 AP3S1Q92572 193 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 DCUN1D5Q9BTE7 237 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 ROPN1BQ9BZX4 212 aaPredicted RBP13.56□□□□□ -0.24
UBE3A-228ENST00000638155 SLC52A2Q9HAB3 445 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 ROPN1Q9HAT0 212 aaPredicted RBP13.56□□□□□ -0.24
UBE3A-228ENST00000638155 MYO18AQ92614 2054 aaKnown RBP13.56□□□□□ -0.24
UBE3A-228ENST00000638155 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
UBE3A-228ENST00000638155 S100A2P29034 98 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 CORO7P57737 925 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 DNAJC3Q13217 504 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 SNX17Q15036 470 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 PCNX4Q63HM2 1172 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 GATAD2AQ86YP4 633 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 COLGALT2Q8IYK4 626 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 SPATA18Q8TC71 538 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 EEF1AKMT1Q8WVE0 214 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 GSDMCQ9BYG8 508 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 DSEQ9UL01 958 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 EEF2KO00418 725 aaKnown RBP13.56□□□□□ -0.24
UBE3A-228ENST00000638155 MAPRE3Q9UPY8 281 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 MYO9BQ13459 2157 aa13.56□□□□□ -0.24
UBE3A-228ENST00000638155 PPEF1O14829 653 aaPredicted RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 SSTR3P32745 418 aaPredicted RBP13.55□□□□□ -0.24
UBE3A-228ENST00000638155 PRELPP51888 382 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 G2E3Q7L622 706 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 ULK2Q8IYT8 1036 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 CLHC1Q8NHS4 586 aa13.55□□□□□ -0.24
UBE3A-228ENST00000638155 PPIEQ9UNP9 301 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms