RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 NUMBLQ9Y6R0 609 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 DOCK1Q14185 1865 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 TTLL13PA6NNM8 815 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 ABLIM1O14639 778 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 MCF2LO15068 1137 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 PIAS1O75925 651 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 EIF3EP60228 445 aaKnown RBP21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 PSMC1P62191 440 aaKnown RBP21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 SCARA5Q6ZMJ2 495 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 RFX6Q8HWS3 928 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 SCYL3Q8IZE3 742 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 PTPRN2Q92932 1015 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 APOPT1Q96IL0 206 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 KLF6Q99612 283 aaPredicted RBP21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 FAM167BQ9BTA0 163 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 OSBPL1AQ9BXW6 950 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 HEY2Q9UBP5 337 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 MTO1Q9Y2Z2 717 aaKnown RBP21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 IKBKGQ9Y6K9 419 aa21.04■□□□□ 0.96
SYNGAP1-227ENST00000638142 A0A0G2JND7 137 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 ENTPD5O75356 428 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 SPAG6O75602 509 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 IL1BP01584 269 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 ATP6V1C1P21283 382 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 NEK3P51956 506 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 ARFIP2P53365 341 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 BASP1P80723 227 aaKnown RBP21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 PTK7Q13308 1070 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 C4orf50Q6ZRC1 276 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 KIAA0319LQ8IZA0 1049 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 FAM71DQ8N9W8 422 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 KCTD6Q8NC69 237 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 CMASQ8NFW8 434 aaPredicted RBP21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 TTC8Q8TAM2 541 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 PTCD3Q96EY7 689 aaKnown RBP21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 BTBD10Q9BSF8 475 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 XYLT2Q9H1B5 865 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 CPSF3Q9UKF6 684 aaKnown RBP21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 CHMP2BQ9UQN3 213 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 ETV4P43268 484 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 PTDSS1P48651 473 aaKnown RBP21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 SLC18A2Q05940 514 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 DPYSL3Q14195 570 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 WDR78Q5VTH9 848 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 ZNF483Q8TF39 744 aaPredicted RBP21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 SLC44A1Q8WWI5 657 aa21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 ACO2Q99798 780 aaKnown RBP21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 CADM1Q9BY67 442 aaKnown RBP21.03■□□□□ 0.96
SYNGAP1-227ENST00000638142 CD48P09326 243 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 LINGO3P0C6S8 592 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 RBP3P10745 1247 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 CD19P15391 556 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 C12orf65Q9H3J6 166 aaKnown RBP21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 CYTH4Q9UIA0 394 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 MAFO75444 373 aaPredicted RBP21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 STIP1P31948 543 aaKnown RBP21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 ELK3P41970 407 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 ZNF200P98182 395 aaPredicted RBP21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 TFAMQ00059 246 aaKnown RBP21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 CDK16Q00536 496 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 ACAP1Q15027 740 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 PRKD1Q15139 912 aaPredicted RBP21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 TSNAXIP1Q2TAA8 658 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 LRRC6Q86X45 466 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 TAB3Q8N5C8 712 aaPredicted RBP21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 DNERQ8NFT8 737 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 PRPF31Q8WWY3 499 aaKnown RBP21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 SKA1Q96BD8 255 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 NSL1Q96IY1 281 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 TJP2Q9UDY2 1190 aa21.02■□□□□ 0.96
SYNGAP1-227ENST00000638142 TCRBV9S1A1TA0A576 114 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 INHBAP08476 426 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 HOXC6P09630 235 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 ACADSP16219 412 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 HMGCS2P54868 508 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 ZNF280AP59817 542 aaPredicted RBP21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 ANO7Q6IWH7 933 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 XYLT1Q86Y38 959 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 LMNTD2Q8IXW0 634 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 RSAD1Q9HA92 442 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 METTL5Q9NRN9 209 aaKnown RBP21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 ARL8BQ9NVJ2 186 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 STOML1Q9UBI4 398 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 CFAP69A5D8W1 941 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 H0Y3Z8 333 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 TNNC2P02585 160 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 PTPRAP18433 802 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 KRT72Q14CN4 511 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 C11orf91Q3C1V1 193 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 DCAF15Q66K64 600 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 TRIM68Q6AZZ1 485 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 SH2D5Q6ZV89 423 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 SPATA18Q8TC71 538 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 SERAC1Q96JX3 654 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 PCYT2Q99447 389 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 TMEM120AQ9BXJ8 343 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 SYNCQ9H7C4 482 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 KCNK13Q9HB14 408 aa21.01■□□□□ 0.95
SYNGAP1-227ENST00000638142 PICK1Q9NRD5 415 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms