RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 RNASE12Q5GAN4 147 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 LINC00116Q8NCU8 138 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 OR2W6PQ8NHA6 318 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 AREL1O15033 823 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 TRAPPC3O43617 180 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 OR6A2O95222 327 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 FAM124AQ86V42 546 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 CKMP06732 381 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 GARTP22102 1010 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 GMPSP49915 693 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 TIGD7Q6NT04 549 aaPredicted RBP17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 SP8Q8IXZ3 490 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 UBASH3BQ8TF42 649 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 SLC9A7Q96T83 725 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 CEP41Q9BYV8 373 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 SPATA31A3Q5VYP0 1347 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 HALP42357 657 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 ARMC4Q5T2S8 1044 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 TEDDM1Q5T9Z0 273 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 IER5Q5VY09 327 aa17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 RNPC3Q96LT9 517 aaKnown RBP17.6■□□□□ 0.41
CACNA1A-253ENST00000637927 HNRNPH2P55795 449 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 ARSJQ5FYB0 599 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 PGBD2Q6P3X8 592 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 PROSER1Q86XN7 944 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 ST13P5Q8NFI4 369 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 UTP15Q8TED0 518 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 RSPH1Q8WYR4 309 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 CCDC188H7C350 402 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 MAPK11Q15759 364 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 ATF7IP2Q5U623 682 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 KLHL17Q6TDP4 642 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 NECAB2Q7Z6G3 386 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 IL17RAQ96F46 866 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 GTF2H1P32780 548 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 ARF3P61204 181 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 ARF1P84077 181 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 MADCAM1Q13477 382 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 ZNF618Q5T7W0 954 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 DENND6AQ8IWF6 608 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 CHP1Q99653 195 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 GOLPH3Q9H4A6 298 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 SPON1Q9HCB6 807 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 SMPD4Q9NXE4 827 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 SH3BP4Q9P0V3 963 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 ITGB3P05106 788 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 ACOX1Q15067 660 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 ZNF57Q68EA5 555 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 TRIM65Q6PJ69 517 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 BHLHE41Q9C0J9 482 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 SCN3BQ9NY72 215 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 TIMM13Q9Y5L4 95 aaPredicted RBP17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 PTCH1Q13635 1447 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 MIF4GDA9UHW6 222 aaKnown RBP17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 TNKS2Q9H2K2 1166 aa17.59■□□□□ 0.41
CACNA1A-253ENST00000637927 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 UBE2Q2LH0YL09 131 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 DEAF1O75398 565 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 ZNF177Q13360 481 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 RAPSNQ13702 412 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 CAMK1Q14012 370 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 ATP6V1C2Q8NEY4 427 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 COQ7Q99807 217 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 LRRC1Q9BTT6 524 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 ABCG8Q9H221 673 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 TAF1DQ9H5J8 278 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 ZCCHC17Q9NP64 241 aaKnown RBP17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 SLC35C2Q9NQQ7 365 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 RNASEH1O60930 286 aaKnown RBP17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 MAPKAPK2P49137 400 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 SNRNP35Q16560 246 aaKnown RBP17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 FMR1NBQ8N0W7 255 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 RBBP8NLQ8NC74 664 aaPredicted RBP17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 DPF2Q92785 391 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 KLHL20Q9Y2M5 609 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 SESN1Q9Y6P5 492 aa17.58■□□□□ 0.41
CACNA1A-253ENST00000637927 GMNCA6NCL1 334 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 EVPLLA8MZ36 301 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 STXBP3O00186 592 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 NDUFS2O75306 463 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 SYTL5Q8TDW5 730 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 SPACA6W5XKT8 324 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 FAM25EA8MYX2 175 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 HLA-DQA1Q5Y7H0 255 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 RBM23Q86U06 439 aaKnown RBP17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 OSBPL5Q9H0X9 879 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 PITPNM2Q9BZ72 1349 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 RBP5P82980 135 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 FAM71DQ8N9W8 422 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 ZMYM5Q9UJ78 669 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 DAGLAQ9Y4D2 1042 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 LYVE1Q9Y5Y7 322 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 HIRAP54198 1017 aaPredicted RBP17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 OVGP1Q12889 678 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 CHI3L2Q15782 390 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 ZNRF3Q9ULT6 936 aa17.58■□□□□ 0.4
CACNA1A-253ENST00000637927 KLRC2P26717 231 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 HPS6Q86YV9 775 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 TP53INP1Q96A56 240 aa17.57■□□□□ 0.4
CACNA1A-253ENST00000637927 ACOX2Q99424 681 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms