RNA–Protein interactions for RNA: ENST00000636767.1

CLN5-215, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,368 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-215ENST00000636767 PCDHGC3Q9UN70 934 aa22.56■■□□□ 1.2
CLN5-215ENST00000636767 PARP14Q460N5 1801 aa22.56■■□□□ 1.2
CLN5-215ENST00000636767 IQANK1A0A1B0GTG1 560 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 KIF3CO14782 793 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 KRT7P08729 469 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 HMGB2P26583 209 aaKnown RBP22.55■■□□□ 1.2
CLN5-215ENST00000636767 BASP1P80723 227 aaKnown RBP22.55■■□□□ 1.2
CLN5-215ENST00000636767 SLC18A2Q05940 514 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 FAAP100Q0VG06 881 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 MTMR2Q13614 643 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 KRT72Q14CN4 511 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 PTPN20Q4JDL3 420 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 BRSK2Q8IWQ3 736 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.55■■□□□ 1.2
CLN5-215ENST00000636767 FAM71DQ8N9W8 422 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 ZNF526Q8TF50 670 aaPredicted RBP22.55■■□□□ 1.2
CLN5-215ENST00000636767 WDR60Q8WVS4 1066 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 SLC44A1Q8WWI5 657 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 MCUR1Q96AQ8 359 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 NIF3L1Q9GZT8 377 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 DHX33Q9H6R0 707 aaKnown RBP22.55■■□□□ 1.2
CLN5-215ENST00000636767 SPATS2LQ9NUQ6 558 aaKnown RBP22.55■■□□□ 1.2
CLN5-215ENST00000636767 CNTN3Q9P232 1028 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 TCRBV9S1A1TA0A576 114 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 ARL2P36404 184 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 ELK3P41970 407 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 NRLP54845 237 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 TMEM154Q6P9G4 183 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 VPS52Q8N1B4 723 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 FLAD1Q8NFF5 587 aa22.55■■□□□ 1.2
CLN5-215ENST00000636767 SMAPO00193 183 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 CAPN9O14815 690 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 MAP3K13O43283 966 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 PSMG1O95456 288 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 NPTXRO95502 500 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 OCRLQ01968 901 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 KBTBD12Q3ZCT8 623 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 IRGCQ6NXR0 463 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 DENND1BQ6P3S1 775 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 WDR49Q8IV35 697 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 THNSL1Q8IYQ7 743 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 UCMAQ8WVF2 138 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 LBHD1Q9BQE6 289 aaPredicted RBP22.54■■□□□ 1.2
CLN5-215ENST00000636767 TTLL13PA6NNM8 815 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 KBTBD13C9JR72 458 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 WEE2P0C1S8 567 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 MYL2P10916 166 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 PYGBP11216 843 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 EIF3EP60228 445 aaKnown RBP22.54■■□□□ 1.2
CLN5-215ENST00000636767 MXRA7P84157 204 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 CCDC62Q6P9F0 684 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 SCARA5Q6ZMJ2 495 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 SCYL3Q8IZE3 742 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 MTMR14Q8NCE2 650 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 NSUN6Q8TEA1 469 aaKnown RBP22.54■■□□□ 1.2
CLN5-215ENST00000636767 SCG3Q8WXD2 468 aaKnown RBP22.54■■□□□ 1.2
CLN5-215ENST00000636767 OXNAD1Q96HP4 312 aaPredicted RBP22.54■■□□□ 1.2
CLN5-215ENST00000636767 MMADHCQ9H3L0 296 aaPredicted RBP22.54■■□□□ 1.2
CLN5-215ENST00000636767 ARHGEF4Q9NR80 690 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 STRIP2Q9ULQ0 834 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 LRCH1Q9Y2L9 728 aa22.54■■□□□ 1.2
CLN5-215ENST00000636767 E5RJQ4 531 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 FCHO1O14526 889 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 TBX10O75333 385 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 IL1BP01584 269 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 MYCNP04198 464 aaPredicted RBP22.53■■□□□ 1.2
CLN5-215ENST00000636767 RARBP10826 455 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 ESRRAP11474 423 aaPredicted RBP22.53■■□□□ 1.2
CLN5-215ENST00000636767 KRT3P12035 628 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 NEFHP12036 1026 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 ZNF200P98182 395 aaPredicted RBP22.53■■□□□ 1.2
CLN5-215ENST00000636767 SLC34A1Q06495 639 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 HADHQ16836 314 aaKnown RBP22.53■■□□□ 1.2
CLN5-215ENST00000636767 LRRC74BQ6ZQY2 392 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 SYNCQ9H7C4 482 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 METTL5Q9NRN9 209 aaKnown RBP22.53■■□□□ 1.2
CLN5-215ENST00000636767 CYTH4Q9UIA0 394 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 COL11A1P12107 1806 aaPredicted RBP22.53■■□□□ 1.2
CLN5-215ENST00000636767 ATG7O95352 703 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 OATP04181 439 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 INHBAP08476 426 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 SP100P23497 879 aaPredicted RBP22.53■■□□□ 1.2
CLN5-215ENST00000636767 SERPINB4P48594 390 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 DPYSL3Q14195 570 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 RFX6Q8HWS3 928 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 SPDYE1Q8NFV5 336 aaPredicted RBP22.53■■□□□ 1.2
CLN5-215ENST00000636767 IKBKGQ9Y6K9 419 aa22.53■■□□□ 1.2
CLN5-215ENST00000636767 APOC4-APOC2K7ER74 178 aa22.52■■□□□ 1.2
CLN5-215ENST00000636767 FAM189A1O60320 539 aa22.52■■□□□ 1.2
CLN5-215ENST00000636767 APOC2P02655 101 aa22.52■■□□□ 1.2
CLN5-215ENST00000636767 FAM91A1Q658Y4 838 aa22.52■■□□□ 1.2
CLN5-215ENST00000636767 EMC1Q8N766 993 aa22.52■■□□□ 1.2
CLN5-215ENST00000636767 CDHR1Q96JP9 859 aa22.52■■□□□ 1.2
CLN5-215ENST00000636767 NMUR2Q9GZQ4 415 aa22.52■■□□□ 1.2
CLN5-215ENST00000636767 ARMCX1Q9P291 453 aa22.52■■□□□ 1.2
CLN5-215ENST00000636767 TEX264Q9Y6I9 313 aa22.52■■□□□ 1.2
CLN5-215ENST00000636767 FAM237BA0A1B0GVD1 139 aa22.52■■□□□ 1.19
CLN5-215ENST00000636767 FESP07332 822 aa22.52■■□□□ 1.19
CLN5-215ENST00000636767 RBP3P10745 1247 aa22.52■■□□□ 1.19
CLN5-215ENST00000636767 AP3M2P53677 418 aa22.52■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms