RNA–Protein interactions for RNA: ENST00000636759.1

SCN1A-213, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 3,606 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-213ENST00000636759 PCSK7Q16549 785 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 CRY2Q49AN0 593 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 BOLA3Q53S33 107 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 ELMSAN1Q6PJG2 1045 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 GPR141Q7Z602 305 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 HEATR4Q86WZ0 1026 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 GSTCDQ8NEC7 633 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 RFWD2Q8NHY2 731 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 ACTRT2Q8TDY3 377 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 C7orf43Q8WVR3 580 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 JDP2Q8WYK2 163 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 CCDC124Q96CT7 223 aaKnown RBP7.13□□□□□ -1.27
SCN1A-213ENST00000636759 LRGUKQ96M69 825 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 GLT8D2Q9H1C3 349 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 UGT1A7Q9HAW7 530 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 UGT1A10Q9HAW8 530 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 UGT1A8Q9HAW9 530 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 KIAA1586Q9HCI6 787 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 C12orf4Q9NQ89 552 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 RAB26Q9ULW5 256 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 PADI4Q9UM07 663 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 PCDHA4Q9UN74 947 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 SPEF1Q9Y4P9 236 aa7.13□□□□□ -1.27
SCN1A-213ENST00000636759 LOC105371267A0A1B0GV96 52 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 KRBA1A5PL33 1030 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 POC1B-GALNT4F8VUJ3 575 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 PEX1O43933 1283 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 ICMTO60725 284 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 FCER1AP12319 257 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 TRAPPC10P48553 1259 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 DYNLL1P63167 89 aaKnown RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 PTK2Q05397 1052 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 SGO2Q562F6 1265 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 CAVIN4Q5BKX8 364 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 MDH1BQ5I0G3 518 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 DPY19L2P1Q6NXN4 242 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 PIK3AP1Q6ZUJ8 805 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 CYP4V2Q6ZWL3 525 aaPredicted RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 USP43Q70EL4 1123 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 NLRX1Q86UT6 975 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 ELMOD1Q8N336 334 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 CCDC89Q8N998 374 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 MIGA1Q8NAN2 632 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 DAGLBQ8NCG7 672 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 TOR1AIP2Q8NFQ8 470 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 PTCD2Q8WV60 388 aaKnown RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 RPGRQ92834 1020 aaKnown RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 DCUN1D1Q96GG9 259 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 SNF8Q96H20 258 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 CDHR1Q96JP9 859 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 TSSK1BQ9BXA7 367 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 GINM1Q9NU53 330 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 SEPT10Q9P0V9 454 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 DSEQ9UL01 958 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 KIAA1257Q9ULG3 409 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 PSMD11O00231 422 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 TSPAN1O60635 241 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 CLASP2O75122 1294 aaKnown RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 KRT6AP02538 564 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 KRT6BP04259 564 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 CCDC159P0C7I6 412 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 KRT10P13645 584 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 KRT5P13647 590 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 FOSL1P15407 271 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 ZNF23P17027 643 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 ALDH1A3P47895 512 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 HSPA13P48723 471 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 THOP1P52888 689 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 NPEPPSP55786 919 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 TPTEP56180 551 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 CTTNQ14247 550 aaKnown RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 ARSHQ5FYA8 562 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 FAM182BQ5T319 152 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 ARL6IP4Q66PJ3 421 aaKnown RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 KRT80Q6KB66 452 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 PAOXQ6QHF9 649 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 LZTR1Q8N653 840 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 TNIP2Q8NFZ5 429 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 MAML1Q92585 1016 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 OXNAD1Q96HP4 312 aaPredicted RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 MOV10Q9HCE1 1003 aaKnown RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 VPS45Q9NRW7 570 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 SACM1LQ9NTJ5 587 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 HOXC10Q9NYD6 342 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 TBC1D14Q9P2M4 693 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 PCYOX1Q9UHG3 505 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 POU2F3Q9UKI9 436 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 A0A0A6YYK5 440 aaPredicted RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 MAGEB6P1A0A0J9YX57 407 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 MYOCOSA0A1B0GUC4 107 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 KLRG2A4D1S0 409 aaPredicted RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 ANKRD62A6NC57 917 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 GOLGA8IPA6NC78 632 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 PSMD12O00232 456 aaPredicted RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 TAF4O00268 1085 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 KLHL41O60662 606 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 TCEA3O75764 348 aa7.12□□□□□ -1.27
SCN1A-213ENST00000636759 PCP11498 1178 aaKnown RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 COL11A2P13942 1736 aaPredicted RBP7.12□□□□□ -1.27
SCN1A-213ENST00000636759 PSMC3P17980 439 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms