RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 MYBL1P10243 752 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 DNAJB1P25685 340 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 LMO2P25791 158 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 TAF6P49848 677 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 CLCNKBP51801 687 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 NUBP1P53384 320 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 FAM189BP81408 668 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 WHAMMP3Q1A5X7 153 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 SV2CQ496J9 727 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 PAN2Q504Q3 1202 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 CD300LGQ6UXG3 332 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 TMEM184AQ6ZMB5 413 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 RSRC2Q7L4I2 434 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 PHLDB2Q86SQ0 1253 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 DAAM2Q86T65 1068 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 RNF169Q8NCN4 708 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 RABGGTAQ92696 567 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 HES6Q96HZ4 224 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 LPIN3Q9BQK8 851 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 C11orf70Q9BRQ4 267 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 NUP85Q9BW27 656 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 LHX5Q9H2C1 402 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 DPEP3Q9H4B8 488 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 RSAD1Q9HA92 442 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 UBN1Q9NPG3 1134 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 AVENQ9NQS1 362 aaPredicted RBP10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 TLR9Q9NR96 1032 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 EHD2Q9NZN4 543 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 CNOT8Q9UFF9 292 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 VWA8A3KMH1 1905 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 PTPRDP23468 1912 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 ATG2AQ2TAZ0 1938 aa10.05□□□□□ -0.8
PDLIM5-223ENST00000627587 KIF4AO95239 1232 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 GJB6O95452 261 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 TCP1P17987 556 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 LAG3P18627 525 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 IBSPP21815 317 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 DUSP6Q16828 381 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 UPP1Q16831 310 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 PTPN20Q4JDL3 420 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 PKDCCQ504Y2 493 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 CLLU1OSQ5K130 101 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 DCAF12L1Q5VU92 463 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 PLEKHA7Q6IQ23 1121 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 C11orf63Q6NUN7 778 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 MAMSTRQ6ZN01 415 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 MMS22LQ6ZRQ5 1243 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 OSTM1Q86WC4 334 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 CEP112Q8N8E3 955 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 TMEM35BQ8NCS4 154 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 ZNF564Q8TBZ8 553 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 CD101Q93033 1021 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 VCPIP1Q96JH7 1222 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 NT5C1AQ9BXI3 368 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 ZNF518BQ9C0D4 1074 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 SMARCAL1Q9NZC9 954 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 UVRAGQ9P2Y5 699 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 USP15Q9Y4E8 981 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 TBKBP1A7MCY6 615 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 DDX3YO15523 660 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 MICAL2O94851 1124 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 POMCP01189 267 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 VDRP11473 427 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 HOXB8P17481 243 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 GPD2P43304 727 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 AARSP49588 968 aaKnown RBP eCLIP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 PLCB3Q01970 1234 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 SIGLEC14Q08ET2 396 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 MAMLD1Q13495 774 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 CNGA2Q16280 664 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 CCDC142Q17RM4 750 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 ERCC6LQ2NKX8 1250 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 PPP1R26Q5T8A7 1209 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 LIN9Q5TKA1 542 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 ZNF572Q7Z3I7 529 aaPredicted RBP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 PEX26Q7Z412 305 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 ADGRD2Q7Z7M1 963 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 ACOT1Q86TX2 421 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 RBM23Q86U06 439 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 PDCL2Q8N4E4 241 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 FBXL6Q8N531 539 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 MS4A14Q96JA4 679 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 CAPZA3Q96KX2 299 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 CPXM1Q96SM3 734 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 NGRNQ9NPE2 291 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 TMEM161AQ9NX61 479 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 ADAM22Q9P0K1 906 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 KIAA1257Q9ULG3 409 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 ALG6Q9Y672 507 aa10.04□□□□□ -0.8
PDLIM5-223ENST00000627587 CARNS1A5YM72 827 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 CASTOR2A6NHX0 329 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 F8W810 466 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 GABRDO14764 452 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 FSCN2O14926 492 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 HUS1O60921 280 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 FGF18O76093 207 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 MARCKSL1P49006 195 aa10.03□□□□□ -0.8
PDLIM5-223ENST00000627587 DNA2P51530 1060 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms