RNA–Protein interactions for RNA: ENST00000625245.2

SMN1-211, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN1, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-211ENST00000625245 ABL1P00519 1130 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 CENPBP07199 599 aaPredicted RBP20.26■□□□□ 0.83
SMN1-211ENST00000625245 WARSP23381 471 aaKnown RBP20.26■□□□□ 0.83
SMN1-211ENST00000625245 GBP1P32455 592 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 SEC13P55735 322 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 USP46P62068 366 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 STK38Q15208 465 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 C2orf27AQ580R0 203 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 N4BP2L1Q5TBK1 243 aaPredicted RBP20.26■□□□□ 0.83
SMN1-211ENST00000625245 TCEAL6Q6IPX3 200 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 HS2ST1Q7LGA3 356 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 LIMS2Q7Z4I7 341 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 TSTD1Q8NFU3 115 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 TCEAL3Q969E4 200 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 SNX25Q9H3E2 840 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 MYOFQ9NZM1 2061 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 THADAQ6YHU6 1953 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 NUP205Q92621 2012 aa20.26■□□□□ 0.83
SMN1-211ENST00000625245 CHD8Q9HCK8 2581 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 LEFTY2O00292 366 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 TM4SF5O14894 197 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 DLATP10515 647 aaKnown RBP20.25■□□□□ 0.83
SMN1-211ENST00000625245 TNNI1P19237 187 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 GNL1P36915 607 aaPredicted RBP20.25■□□□□ 0.83
SMN1-211ENST00000625245 MDH1BQ5I0G3 518 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 RNF43Q68DV7 783 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 TRAPPC11Q7Z392 1133 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 WDR49Q8IV35 697 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 OR6B3Q8NGW1 331 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 CCDC26Q8TAB7 109 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 MYCBPAPQ8TBZ2 947 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 PCED1BQ96HM7 432 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 MRPL45Q9BRJ2 306 aaKnown RBP20.25■□□□□ 0.83
SMN1-211ENST00000625245 LRRC27Q9C0I9 530 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 KIAA1586Q9HCI6 787 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 EBF1Q9UH73 591 aa20.25■□□□□ 0.83
SMN1-211ENST00000625245 TRIM66O15016 1216 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 TCF3P15923 654 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 HOXD13P35453 343 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 ASIC1P78348 528 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 ZXDBP98169 803 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 TTC30AQ86WT1 665 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 CCDC33Q8N5R6 958 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 USP33Q8TEY7 942 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 FNBP1Q96RU3 617 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 TPSD1Q9BZJ3 242 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 TNMDQ9H2S6 317 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 ZSCAN16Q9H4T2 348 aaPredicted RBP20.24■□□□□ 0.83
SMN1-211ENST00000625245 EHD2Q9NZN4 543 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 MTMR6Q9Y217 621 aa20.24■□□□□ 0.83
SMN1-211ENST00000625245 MORC2Q9Y6X9 1032 aaPredicted RBP20.24■□□□□ 0.83
SMN1-211ENST00000625245 KMT2BQ9UMN6 2715 aaPredicted RBP20.23■□□□□ 0.83
SMN1-211ENST00000625245 ZNF840PA6NDX5 716 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 F8VP50 259 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 K7EQS6 105 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 SCAMP3O14828 347 aaKnown RBP20.23■□□□□ 0.83
SMN1-211ENST00000625245 CLIC2O15247 247 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 CAVIN2O95810 425 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 CST3P01034 146 aaPredicted RBP20.23■□□□□ 0.83
SMN1-211ENST00000625245 PFKLP17858 780 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 OPRD1P41143 372 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 IFRD2Q12894 506 aaPredicted RBP20.23■□□□□ 0.83
SMN1-211ENST00000625245 USP39Q53GS9 565 aaKnown RBP20.23■□□□□ 0.83
SMN1-211ENST00000625245 FILIP1Q7Z7B0 1213 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 CCDC127Q96BQ5 260 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 DHX58Q96C10 678 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 CEP295NLQ96MC4 621 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 RNF38Q9H0F5 515 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 SMPD4Q9NXE4 827 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 ANGPTL2Q9UKU9 493 aa20.23■□□□□ 0.83
SMN1-211ENST00000625245 ANTXRLA6NF34 631 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 CYP2J2P51589 502 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 TNNC1P63316 161 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 AMPD3Q01432 767 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 SNRNP35Q16560 246 aaKnown RBP20.22■□□□□ 0.83
SMN1-211ENST00000625245 WDR72Q3MJ13 1102 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 TDRD10Q5VZ19 366 aaKnown RBP20.22■□□□□ 0.83
SMN1-211ENST00000625245 ANO7Q6IWH7 933 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 C8orf48Q96LL4 319 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 EDEM2Q9BV94 578 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 TTLL2Q9BWV7 592 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 LSM14BQ9BX40 385 aaKnown RBP20.22■□□□□ 0.83
SMN1-211ENST00000625245 TRIM9Q9C026 710 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 KBTBD4Q9NVX7 518 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 TFIP11Q9UBB9 837 aaKnown RBP20.22■□□□□ 0.83
SMN1-211ENST00000625245 NME7Q9Y5B8 376 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 CPQQ9Y646 472 aa20.22■□□□□ 0.83
SMN1-211ENST00000625245 BCLAF3A2AJT9 711 aaKnown RBP20.21■□□□□ 0.83
SMN1-211ENST00000625245 SPTLC2O15270 562 aa20.21■□□□□ 0.83
SMN1-211ENST00000625245 EIF3DO15371 548 aaKnown RBP eCLIP20.21■□□□□ 0.83
SMN1-211ENST00000625245 STX6O43752 255 aa20.21■□□□□ 0.83
SMN1-211ENST00000625245 KCNK5O95279 499 aa20.21■□□□□ 0.83
SMN1-211ENST00000625245 CYP17A1P05093 508 aa20.21■□□□□ 0.83
SMN1-211ENST00000625245 PTPN1P18031 435 aaKnown RBP20.21■□□□□ 0.83
SMN1-211ENST00000625245 PPP3CCP48454 512 aa20.21■□□□□ 0.83
SMN1-211ENST00000625245 NASPP49321 788 aaPredicted RBP20.21■□□□□ 0.83
SMN1-211ENST00000625245 NOP14P78316 857 aaKnown RBP20.21■□□□□ 0.83
SMN1-211ENST00000625245 SLC7A9P82251 487 aa20.21■□□□□ 0.83
SMN1-211ENST00000625245 TAF10Q12962 218 aa20.21■□□□□ 0.83
SMN1-211ENST00000625245 TRPC3Q13507 836 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms