RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 DCLK3Q9C098 648 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 MTMR12Q9C0I1 747 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 CXCL16Q9H2A7 254 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 SENP1Q9P0U3 644 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 RPL26L1Q9UNX3 145 aaKnown RBP18.52■□□□□ 0.56
PCF11-207ENST00000624931 PIN4Q9Y237 131 aaKnown RBP18.52■□□□□ 0.56
PCF11-207ENST00000624931 STARD13Q9Y3M8 1113 aa18.52■□□□□ 0.56
PCF11-207ENST00000624931 MOXD2PA6NHM9 499 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 CYP26A1O43174 497 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 CABYRO75952 493 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 CHRNA1P02708 482 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 THPOP40225 353 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 ITGA8P53708 1063 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 KCNJ2P63252 427 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 MGAT3Q09327 533 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 NAA25Q14CX7 972 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 CCNG2Q16589 344 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 RGS9BPQ6ZS82 235 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 AGGF1Q8N302 714 aaeCLIP18.52■□□□□ 0.55
PCF11-207ENST00000624931 FBXL13Q8NEE6 735 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 GLT1D1Q96MS3 346 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 TTC25Q96NG3 672 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 TRPV6Q9H1D0 765 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 RPF1Q9H9Y2 349 aaKnown RBP18.52■□□□□ 0.55
PCF11-207ENST00000624931 RAB20Q9NX57 234 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 HES2Q9Y543 173 aa18.52■□□□□ 0.55
PCF11-207ENST00000624931 LACTBL1A8MY62 500 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 NFICP08651 508 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 CCL5P13501 91 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 CALRP27797 417 aaKnown RBP18.51■□□□□ 0.55
PCF11-207ENST00000624931 ADCY8P40145 1251 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 CETN2P41208 172 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 PIK3CAP42336 1068 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 PSEN1P49768 467 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 BPIFB4P59827 614 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 LRRC14Q15048 493 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 CLEC16AQ2KHT3 1053 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 SPOPLQ6IQ16 392 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 PPM1KQ8N3J5 372 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 MGARPQ8TDB4 240 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 KREMEN1Q96MU8 473 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 TMEM237Q96Q45 408 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 TSEN34Q9BSV6 310 aaKnown RBP18.51■□□□□ 0.55
PCF11-207ENST00000624931 TRIM6Q9C030 488 aaPredicted RBP18.51■□□□□ 0.55
PCF11-207ENST00000624931 SENP6Q9GZR1 1112 aaPredicted RBP18.51■□□□□ 0.55
PCF11-207ENST00000624931 NINJ2Q9NZG7 142 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 CEP350Q5VT06 3117 aa18.51■□□□□ 0.55
PCF11-207ENST00000624931 TP73O15350 636 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 UNC5CO95185 931 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 ALDH3A1P30838 453 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 RASSF2P50749 326 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 TFAMQ00059 246 aaKnown RBP18.5■□□□□ 0.55
PCF11-207ENST00000624931 ZKSCAN8Q15776 578 aaPredicted RBP18.5■□□□□ 0.55
PCF11-207ENST00000624931 TRIM71Q2Q1W2 868 aaKnown RBP18.5■□□□□ 0.55
PCF11-207ENST00000624931 ACCSLQ4AC99 568 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 NOTUMQ6P988 496 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 RSPH3Q86UC2 560 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 TDRPQ86YL5 185 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 TEX9Q8N6V9 391 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 ANKRD42Q8N9B4 389 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 C1orf54Q8WWF1 131 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 CFAP57Q96MR6 1250 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 ADPGKQ9BRR6 497 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 NXF3Q9H4D5 531 aaKnown RBP18.5■□□□□ 0.55
PCF11-207ENST00000624931 PAK6Q9NQU5 681 aaPredicted RBP18.5■□□□□ 0.55
PCF11-207ENST00000624931 STARD7Q9NQZ5 370 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 NOD1Q9Y239 953 aa18.5■□□□□ 0.55
PCF11-207ENST00000624931 FAM47DPA6NHR8 397 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 M0QZ92 97 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 PSTPIP1O43586 416 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 B4GALT4O60513 344 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 HNRNPCL1O60812 293 aaKnown RBP18.49■□□□□ 0.55
PCF11-207ENST00000624931 RPSAP08865 295 aaKnown RBP18.49■□□□□ 0.55
PCF11-207ENST00000624931 RASA2Q15283 850 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 SLC10A6Q3KNW5 377 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 DCAF4L1Q3SXM0 396 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 UBXN11Q5T124 520 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 JADE1Q6IE81 842 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 SLC27A1Q6PCB7 646 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 ZNF365Q70YC5 407 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 SLC47A2Q86VL8 602 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 WDR49Q8IV35 697 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 HELQQ8TDG4 1101 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 INPP5DQ92835 1189 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 APOL6Q9BWW8 343 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 PITPNM3Q9BZ71 974 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 RNF208Q9H0X6 261 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 APOBEC3GQ9HC16 384 aaKnown RBP18.49■□□□□ 0.55
PCF11-207ENST00000624931 RNF19AQ9NV58 838 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 SNTG2Q9NY99 539 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 SMG5Q9UPR3 1016 aaKnown RBP18.49■□□□□ 0.55
PCF11-207ENST00000624931 PHF24Q9UPV7 400 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 NAALADL1Q9UQQ1 740 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 USH1CQ9Y6N9 552 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 BRCA2P51587 3418 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 UMODL1Q5DID0 1318 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 KBTBD13C9JR72 458 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 DCTN3O75935 186 aa18.49■□□□□ 0.55
PCF11-207ENST00000624931 ATP2A2P16615 1042 aaKnown RBP18.49■□□□□ 0.55
PCF11-207ENST00000624931 CHKAP35790 457 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms