RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 BPIFB1Q8TDL5 484 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 CLDN23Q96B33 292 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 B3GNT5Q9BYG0 378 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 DPEP3Q9H4B8 488 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 C8orf33Q9H7E9 229 aaPredicted RBP13.23□□□□□ -0.29
LINC00963-217ENST00000624009 PNPLA8Q9NP80 782 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 LTB4R2Q9NPC1 389 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 DMAP1Q9NPF5 467 aaPredicted RBP13.23□□□□□ -0.29
LINC00963-217ENST00000624009 TDP1Q9NUW8 608 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 IL37Q9NZH6 218 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 MYO18AQ92614 2054 aaKnown RBP13.23□□□□□ -0.29
LINC00963-217ENST00000624009 GPR179Q6PRD1 2367 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 FRYLO94915 3013 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 SPAG17Q6Q759 2223 aa13.23□□□□□ -0.29
LINC00963-217ENST00000624009 CFAP54Q96N23 3096 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 TRAV19A0A0A6YYK7 116 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 FAM92AA1XBS5 289 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 PPP1R3GB7ZBB8 358 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 STK25O00506 426 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 P4HA2O15460 535 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 PI15O43692 258 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 CILPO75339 1184 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 PRAMEF12O95522 483 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 GNA14O95837 355 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 USP17L7P0C7H9 530 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 BMP6P22004 513 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 NDST1P52848 882 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 PMS1P54277 932 aaKnown RBP13.22□□□□□ -0.29
LINC00963-217ENST00000624009 CDH8P55286 799 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 MARSP56192 900 aaKnown RBP13.22□□□□□ -0.29
LINC00963-217ENST00000624009 CYP4F8P98187 520 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 GRM2Q14416 872 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 WDR44Q5JSH3 913 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 SNX30Q5VWJ9 437 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 SMYD5Q6GMV2 418 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 TTI2Q6NXR4 508 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 TPRG1Q6ZUI0 275 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 MAB21L3Q8N8X9 362 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 ST13P5Q8NFI4 369 aaPredicted RBP13.22□□□□□ -0.29
LINC00963-217ENST00000624009 CSGALNACT1Q8TDX6 532 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 SLC35C1Q96A29 364 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 RSPRY1Q96DX4 576 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 SLITRK1Q96PX8 696 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 HNRNPABQ99729 332 aaKnown RBP13.22□□□□□ -0.29
LINC00963-217ENST00000624009 NT5C1AQ9BXI3 368 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 ZNF518BQ9C0D4 1074 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 SDCBP2Q9H190 292 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 APOBEC3GQ9HC16 384 aaKnown RBP13.22□□□□□ -0.29
LINC00963-217ENST00000624009 CSNK1G1Q9HCP0 422 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 HEBP1Q9NRV9 189 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 RAB20Q9NX57 234 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 TRPM5Q9NZQ8 1165 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 KIAA1468Q9P260 1216 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 MAGED2Q9UNF1 606 aaPredicted RBP13.22□□□□□ -0.29
LINC00963-217ENST00000624009 MYO16Q9Y6X6 1858 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 MYOFQ9NZM1 2061 aa13.22□□□□□ -0.29
LINC00963-217ENST00000624009 ATG2BQ96BY7 2078 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 SHISA7A6NL88 538 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 PROB1E7EW31 1015 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 OLFM2O95897 454 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 HOXD11P31277 338 aaPredicted RBP13.21□□□□□ -0.29
LINC00963-217ENST00000624009 TUBP50607 506 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 SDHAF4Q5VUM1 108 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 TXNDC8Q6A555 127 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 SCARA5Q6ZMJ2 495 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 PAQR9Q6ZVX9 377 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 FAM35AQ86V20 835 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 RALGPS2Q86X27 583 aaPredicted RBP13.21□□□□□ -0.29
LINC00963-217ENST00000624009 FUKQ8N0W3 1084 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 NUP93Q8N1F7 819 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 ZNF687Q8N1G0 1237 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 ERCC4Q92889 916 aaPredicted RBP13.21□□□□□ -0.29
LINC00963-217ENST00000624009 USP13Q92995 863 aaPredicted RBP13.21□□□□□ -0.29
LINC00963-217ENST00000624009 DUSP9Q99956 384 aaKnown RBP13.21□□□□□ -0.29
LINC00963-217ENST00000624009 FAM83CQ9BQN1 747 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 GCNT4Q9P109 453 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 ARHGAP26Q9UNA1 814 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 PIAS3Q9Y6X2 628 aa13.21□□□□□ -0.29
LINC00963-217ENST00000624009 TRIM49BA6NDI0 452 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 ZNF840PA6NDX5 716 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 FAM170BA6NMN3 283 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 TNFRSF10BO14763 440 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 CLSTN1O94985 981 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 FGFR1OPO95684 399 aaKnown RBP13.2□□□□□ -0.3
LINC00963-217ENST00000624009 PRKCSHP14314 528 aaPredicted RBP13.2□□□□□ -0.3
LINC00963-217ENST00000624009 CD44P16070 742 aaKnown RBP13.2□□□□□ -0.3
LINC00963-217ENST00000624009 NBL1P41271 181 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 RAP1GAPP47736 663 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 YWHAEP62258 255 aaKnown RBP13.2□□□□□ -0.3
LINC00963-217ENST00000624009 SLC7A9P82251 487 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 AMPD2Q01433 879 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 CETN1Q12798 172 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 PAK1Q13153 545 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 PDGFRLQ15198 375 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 ZNF528Q3MIS6 628 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 SPOPLQ6IQ16 392 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 ACOT1Q86TX2 421 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 NELFBQ8WX92 580 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 LRRC3BQ96PB8 259 aa13.2□□□□□ -0.3
LINC00963-217ENST00000624009 FOXQ1Q9C009 403 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms