RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ARMC4Q5T2S8 1044 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 LAYNQ6UX15 382 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 NT5DC3Q86UY8 548 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 OR8H2Q8N162 312 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 SLC25A41Q8N5S1 370 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 GCNAQ96QF7 691 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 ADAM30Q9UKF2 790 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 MTSS1O43312 755 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 SERPINE1P05121 402 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 RPA1P27694 616 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 SLC1A6P48664 564 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 PTK6Q13882 451 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 GPR162Q16538 588 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 SLC5A9Q2M3M2 681 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 ACCSLQ4AC99 568 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 AGBL1Q96MI9 1066 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 DCLK3Q9C098 648 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 GALNT8Q9NY28 637 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 ZBTB1Q9Y2K1 713 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 PDE2AO00408 941 aaPredicted RBP9.23□□□□□ -0.93
VCL-206ENST00000623461 AREL1O15033 823 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 CAMTA2O94983 1202 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 MYBL2P10244 700 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 TRAF2Q12933 501 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 LAMC2Q13753 1193 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 QRICH1Q2TAL8 776 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 ERFEQ4G0M1 354 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 MYO3AQ8NEV4 1616 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 RNF103O00237 685 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 BBOX1O75936 387 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 PDK1Q15118 436 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 CCDC153Q494R4 210 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 GJB7Q6PEY0 223 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 ERO1BQ86YB8 467 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 NIM1KQ8IY84 436 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 TDRD5Q8NAT2 981 aaKnown RBP9.23□□□□□ -0.93
VCL-206ENST00000623461 OR6P1Q8NGX9 317 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 FAM118BQ9BPY3 351 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 BDH2Q9BUT1 245 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 STK39Q9UEW8 545 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 DIP2AQ14689 1571 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 FLT1P17948 1338 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 RTN3O95197 1032 aaPredicted RBP9.23□□□□□ -0.93
VCL-206ENST00000623461 UBE3AQ05086 875 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 NR1D2Q14995 579 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 FAM83EQ2M2I3 478 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 C6orf10Q5SRN2 563 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 LRRC8DQ7L1W4 858 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 CCDC24Q8N4L8 307 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 GIPC3Q8TF64 312 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 ATG4AQ8WYN0 398 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 DEPDC7Q96QD5 511 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 TRIM54Q9BYV2 358 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 CPVLQ9H3G5 476 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 GPAMQ9HCL2 828 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 CLIC5Q9NZA1 410 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 FEM1BQ9UK73 627 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 NRXN1Q9ULB1 1477 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 PRR23AA6NEV1 266 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 F5H423 210 aaPredicted RBP9.23□□□□□ -0.93
VCL-206ENST00000623461 ZSCAN9O15535 394 aaPredicted RBP9.23□□□□□ -0.93
VCL-206ENST00000623461 RGS5O15539 181 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 AUHQ13825 339 aaKnown RBP9.23□□□□□ -0.93
VCL-206ENST00000623461 LARGE2Q8N3Y3 721 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 SH3TC2Q8TF17 1288 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 NMRK1Q9NWW6 199 aa9.23□□□□□ -0.93
VCL-206ENST00000623461 CPA3P15088 417 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 PDGFRAP16234 1089 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 TRIM28Q13263 835 aaKnown RBP9.22□□□□□ -0.93
VCL-206ENST00000623461 ZNF568Q3ZCX4 644 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 ABHD8Q96I13 439 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 PRR36Q9H6K5 1346 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 NBNO60934 754 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 GDF11O95390 407 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 ABHD2P08910 425 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 ST3GAL1Q11201 340 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 GRB10Q13322 594 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 CCDC142Q17RM4 750 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 PLEKHM3Q6ZWE6 761 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 HDDC2Q7Z4H3 204 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 CDH24Q86UP0 819 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 IQCKQ8N0W5 287 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 GALNT15Q8N3T1 639 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 SLC10A4Q96EP9 437 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 EGFL8Q99944 293 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 POLR3FQ9H1D9 316 aaPredicted RBP9.22□□□□□ -0.93
VCL-206ENST00000623461 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.22□□□□□ -0.93
VCL-206ENST00000623461 GJA3Q9Y6H8 435 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.22□□□□□ -0.93
VCL-206ENST00000623461 ZNF862O60290 1169 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 TLR2O60603 784 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 MPOP05164 745 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 GTF2H1P32780 548 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 MMP13P45452 471 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 PDK4Q16654 411 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 TCHHL1Q5QJ38 904 aaPredicted RBP9.22□□□□□ -0.93
VCL-206ENST00000623461 ARMC3Q5W041 872 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 TRIM74Q86UV6 250 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 TRIM73Q86UV7 250 aa9.22□□□□□ -0.93
VCL-206ENST00000623461 C19orf18Q8NEA5 215 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms