RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 GPR32O75388 356 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 CALB1P05937 261 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 PTPN7P35236 360 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 CETN2P41208 172 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 RPL7AP62424 266 aaKnown RBP18.35■□□□□ 0.53
FAM3A-222ENST00000621967 POU5F1BQ06416 359 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 BFSP2Q13515 415 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 STAT4Q14765 748 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 CCHCR1Q8TD31 782 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 NFKBIZQ9BYH8 718 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 IMPG2Q9BZV3 1241 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 INO80BQ9C086 356 aaPredicted RBP18.35■□□□□ 0.53
FAM3A-222ENST00000621967 ADAMTS10Q9H324 1103 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 ACTL7BQ9Y614 415 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 CDY2AQ9Y6F7 541 aa18.35■□□□□ 0.53
FAM3A-222ENST00000621967 COPS2P61201 443 aa18.34■□□□□ 0.53
FAM3A-222ENST00000621967 UBE2Q1Q7Z7E8 422 aa18.34■□□□□ 0.53
FAM3A-222ENST00000621967 CKAP2Q8WWK9 683 aa18.34■□□□□ 0.53
FAM3A-222ENST00000621967 SGSM3Q96HU1 749 aa18.34■□□□□ 0.53
FAM3A-222ENST00000621967 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.34■□□□□ 0.53
FAM3A-222ENST00000621967 TTLL13PA6NNM8 815 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 CST3P01034 146 aaPredicted RBP18.33■□□□□ 0.53
FAM3A-222ENST00000621967 CKBP12277 381 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 TCF4P15884 667 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 CDH5P33151 784 aaPredicted RBP18.33■□□□□ 0.53
FAM3A-222ENST00000621967 GJC1P36383 396 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 TNFSF9P41273 254 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 CRYBB1P53674 252 aaPredicted RBP18.33■□□□□ 0.53
FAM3A-222ENST00000621967 LRRC14Q15048 493 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 MAPK6Q16659 721 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 TRIM71Q2Q1W2 868 aaKnown RBP18.33■□□□□ 0.53
FAM3A-222ENST00000621967 ATP13A4Q4VNC1 1196 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 SEZ6Q53EL9 994 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 PPP1R15BQ5SWA1 713 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 CYB5D1Q6P9G0 228 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 TRPM8Q7Z2W7 1104 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 CYP4X1Q8N118 509 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 RIBC1Q8N443 379 aaPredicted RBP18.33■□□□□ 0.53
FAM3A-222ENST00000621967 DYDC1Q8WWB3 177 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 ZNF518BQ9C0D4 1074 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 HAUS2Q9NVX0 235 aa18.33■□□□□ 0.53
FAM3A-222ENST00000621967 DNALI1O14645 258 aaPredicted RBP18.33■□□□□ 0.52
FAM3A-222ENST00000621967 TJP3O95049 919 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 BRAFP15056 766 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 SSR1P43307 286 aaKnown RBP18.33■□□□□ 0.52
FAM3A-222ENST00000621967 MNAT1P51948 309 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 GTF2A1P52655 376 aaPredicted RBP18.33■□□□□ 0.52
FAM3A-222ENST00000621967 FAAP100Q0VG06 881 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 MPP2Q14168 576 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 CCDC142Q17RM4 750 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 P3H1Q32P28 736 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 MFSD7Q6UXD7 560 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 IFNLR1Q8IU57 520 aaPredicted RBP18.33■□□□□ 0.52
FAM3A-222ENST00000621967 NIPA2Q8N8Q9 360 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 DNPEPQ9ULA0 475 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 NAALADL1Q9UQQ1 740 aa18.33■□□□□ 0.52
FAM3A-222ENST00000621967 CSDE1O75534 798 aaKnown RBP18.32■□□□□ 0.52
FAM3A-222ENST00000621967 TOM1L1O75674 476 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 KRT1P04264 644 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 PRKCBP05771 671 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 CLTBP09497 229 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 DARSP14868 501 aaKnown RBP18.32■□□□□ 0.52
FAM3A-222ENST00000621967 EIF4BP23588 611 aaKnown RBP18.32■□□□□ 0.52
FAM3A-222ENST00000621967 MAGEA4P43358 317 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 TAP1Q03518 808 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 MBTD1Q05BQ5 628 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 ZNF618Q5T7W0 954 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 SPOCD1Q6ZMY3 1216 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 ALLCQ8N6M5 410 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 MGARPQ8TDB4 240 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 C9orf72Q96LT7 481 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 RBM15Q96T37 977 aaKnown RBP eCLIP18.32■□□□□ 0.524e-9■■■■□ 21.7
FAM3A-222ENST00000621967 CCDC77Q9BR77 488 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 MRPL4Q9BYD3 311 aaKnown RBP18.32■□□□□ 0.52
FAM3A-222ENST00000621967 NIF3L1Q9GZT8 377 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 MINDY3Q9H8M7 445 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 CDHR5Q9HBB8 845 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 KLHL11Q9NVR0 708 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 PCDHGC3Q9UN70 934 aa18.32■□□□□ 0.52
FAM3A-222ENST00000621967 DRG1Q9Y295 367 aaKnown RBP18.32■□□□□ 0.52
FAM3A-222ENST00000621967 TCP11X1B4DZS4 312 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 PI4K2BG5E9Z4 385 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 PITPNM1O00562 1244 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 ABLIM1O14639 778 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 ATP2C2O75185 946 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 CHRNA1P02708 482 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 HARSP12081 509 aaKnown RBP18.31■□□□□ 0.52
FAM3A-222ENST00000621967 KRT10P13645 584 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 OGDHQ02218 1023 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 MGAT3Q09327 533 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 TMEM132AQ24JP5 1023 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 DNAJC24Q6P3W2 148 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 GSTA5Q7RTV2 222 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 PRUNE1Q86TP1 453 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 GLIS1Q8NBF1 620 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 TMEM35BQ8NCS4 154 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 MTMR12Q9C0I1 747 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 HIPK3Q9H422 1215 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 TMEM39AQ9NV64 488 aa18.31■□□□□ 0.52
FAM3A-222ENST00000621967 FGFR1OP2Q9NVK5 253 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms