RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ZNF804AQ7Z570 1209 aa5.46□□□□□ -1.54
BRCA1-229ENST00000621897 L1RE1Q9UN81 338 aa5.46□□□□□ -1.54
BRCA1-229ENST00000621897 PDE8BO95263 885 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 CDK4P11802 303 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 SUMO3P55854 103 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-229ENST00000621897 SLC10A2Q12908 348 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-229ENST00000621897 GRM1Q13255 1194 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 RAB32Q13637 225 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 MLC1Q15049 377 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 CYP1B1Q16678 543 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 ARHGAP29Q52LW3 1261 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 PRAMEF17Q5VTA0 474 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 PARS2Q7L3T8 475 aaKnown RBP5.45□□□□□ -1.54
BRCA1-229ENST00000621897 MICU3Q86XE3 530 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 IZUMO1Q8IYV9 350 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 VGLL2Q8N8G2 317 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 RP9Q8TA86 221 aaKnown RBP5.45□□□□□ -1.54
BRCA1-229ENST00000621897 CYP2W1Q8TAV3 490 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 LENG8Q96PV6 779 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-229ENST00000621897 PUS7Q96PZ0 661 aaKnown RBP5.45□□□□□ -1.54
BRCA1-229ENST00000621897 C1orf112Q9NSG2 853 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 FLRT1Q9NZU1 646 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 CCNL1Q9UK58 526 aaPredicted RBP5.45□□□□□ -1.54
BRCA1-229ENST00000621897 G3BP2Q9UN86 482 aaKnown RBP5.45□□□□□ -1.54
BRCA1-229ENST00000621897 GABRQQ9UN88 632 aa5.45□□□□□ -1.54
BRCA1-229ENST00000621897 CFAP69A5D8W1 941 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 TJP3O95049 919 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 NPSP0C0P6 89 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 FPR3P25089 353 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 PRKAG1P54619 331 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 TPTEP56180 551 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 SATB1Q01826 763 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 CAND1Q86VP6 1230 aaKnown RBP5.44□□□□□ -1.54
BRCA1-229ENST00000621897 PPP2R3CQ969Q6 453 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 ZNF778Q96MU6 729 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 THAP7Q9BT49 309 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-229ENST00000621897 ZNF518BQ9C0D4 1074 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 GBA2Q9HCG7 927 aaPredicted RBP5.44□□□□□ -1.54
BRCA1-229ENST00000621897 SACM1LQ9NTJ5 587 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 RNF7Q9UBF6 113 aa5.44□□□□□ -1.54
BRCA1-229ENST00000621897 WDR91A4D1P6 747 aa5.43□□□□□ -1.54
BRCA1-229ENST00000621897 TRIM43BA6NCK2 446 aa5.43□□□□□ -1.54
BRCA1-229ENST00000621897 TSPAN6O43657 245 aa5.43□□□□□ -1.54
BRCA1-229ENST00000621897 U2AF1L5P0DN76 240 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-229ENST00000621897 MPGP29372 298 aa5.43□□□□□ -1.54
BRCA1-229ENST00000621897 U2AF1Q01081 240 aaKnown RBP eCLIP5.43□□□□□ -1.54
BRCA1-229ENST00000621897 E2F1Q01094 437 aa5.43□□□□□ -1.54
BRCA1-229ENST00000621897 KCTD20Q7Z5Y7 419 aa5.43□□□□□ -1.54
BRCA1-229ENST00000621897 TRIM43Q96BQ3 446 aaPredicted RBP5.43□□□□□ -1.54
BRCA1-229ENST00000621897 PRR25Q96S07 402 aa5.43□□□□□ -1.54
BRCA1-229ENST00000621897 SH2D3AQ9BRG2 576 aa5.43□□□□□ -1.54
BRCA1-229ENST00000621897 C17orf80Q9BSJ5 609 aa5.43□□□□□ -1.54
BRCA1-229ENST00000621897 AP4M1O00189 453 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 BRAFP15056 766 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 EPHB2P29323 1055 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 TUBA4AP68366 448 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 HOXA4Q00056 320 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-229ENST00000621897 SRSF7Q16629 238 aaKnown RBP eCLIP5.42□□□□□ -1.54
BRCA1-229ENST00000621897 SLC44A4Q53GD3 710 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 RNASE12Q5GAN4 147 aaKnown RBP5.42□□□□□ -1.54
BRCA1-229ENST00000621897 C3orf38Q5JPI3 329 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 CEP78Q5JTW2 689 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 L1TD1Q5T7N2 865 aaKnown RBP5.42□□□□□ -1.54
BRCA1-229ENST00000621897 FCRL6Q6DN72 434 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 KIRREL2Q6UWL6 708 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 TRIM72Q6ZMU5 477 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 CHSY1Q86X52 802 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 FAM156AQ8NDB6 213 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 DNAJB14Q8TBM8 379 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 TSR2Q969E8 191 aaKnown RBP5.42□□□□□ -1.54
BRCA1-229ENST00000621897 SUCLG2Q96I99 432 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 DPCDQ9BVM2 203 aaPredicted RBP5.42□□□□□ -1.54
BRCA1-229ENST00000621897 SLC29A3Q9BZD2 475 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 A1CFQ9NQ94 594 aaKnown RBP5.42□□□□□ -1.54
BRCA1-229ENST00000621897 TRMT13Q9NUP7 481 aaKnown RBP5.42□□□□□ -1.54
BRCA1-229ENST00000621897 CDY1Q9Y6F8 540 aa5.42□□□□□ -1.54
BRCA1-229ENST00000621897 PRRT4C9JH25 899 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 H7C4K7 107 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 PYCARD-AS1I3L0S3 204 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 FRS3O43559 492 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 CYP2D6P10635 497 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 ZNF81P51508 661 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 GRM3Q14832 879 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 EZH2Q15910 746 aaKnown RBP5.41□□□□□ -1.54
BRCA1-229ENST00000621897 CERCAMQ5T4B2 595 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 LRCH2Q5VUJ6 765 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 PAPD7Q5XG87 772 aaKnown RBP5.41□□□□□ -1.54
BRCA1-229ENST00000621897 C1QL2Q7Z5L3 287 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 PNLDC1Q8NA58 520 aaKnown RBP5.41□□□□□ -1.54
BRCA1-229ENST00000621897 ABHD11Q8NFV4 315 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 SPSB4Q96A44 273 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 NMD3Q96D46 503 aaKnown RBP5.41□□□□□ -1.54
BRCA1-229ENST00000621897 RITA1Q96K30 269 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 QTRT1Q9BXR0 403 aaKnown RBP5.41□□□□□ -1.54
BRCA1-229ENST00000621897 BHMT2Q9H2M3 363 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 FAM204AQ9H8W3 233 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 XPNPEP3Q9NQH7 507 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 ZSCAN32Q9NX65 697 aa5.41□□□□□ -1.54
BRCA1-229ENST00000621897 DNMT3BQ9UBC3 853 aaKnown RBP5.41□□□□□ -1.54
BRCA1-229ENST00000621897 ZNF70Q9UC06 446 aaPredicted RBP5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms