RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 FGF13Q92913 245 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 TRMT2BQ96GJ1 504 aaKnown RBP15.17■□□□□ 0.02
CBWD3-217ENST00000621474 FAM81BQ96LP2 452 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 MYRFLQ96LU7 910 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 CEP295NLQ96MC4 621 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 DMAP1Q9NPF5 467 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-217ENST00000621474 NUP210Q8TEM1 1887 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-217ENST00000621474 A0A1W2PRU2 124 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 TPM2P07951 284 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 CSH1P0DML2 217 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 CSH2P0DML3 217 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 MAP3K7CLP57077 242 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 PKDCCQ504Y2 493 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 STXBP5Q5T5C0 1151 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 DENND5BQ6ZUT9 1274 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 GPRIN1Q7Z2K8 1008 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 LEMD2Q8NC56 503 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 TTLL2Q9BWV7 592 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 FAM207AQ9NSI2 230 aaPredicted RBP15.17■□□□□ 0.02
CBWD3-217ENST00000621474 TSPAN16Q9UKR8 245 aa15.17■□□□□ 0.02
CBWD3-217ENST00000621474 MRPS23Q9Y3D9 190 aaKnown RBP15.17■□□□□ 0.02
CBWD3-217ENST00000621474 FOXN3O00409 490 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-217ENST00000621474 MICAL2O94851 1124 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 F11P03951 625 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 FAM200BP0CF97 657 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 VDRP11473 427 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 MYL4P12829 197 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 NPR3P17342 541 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 BRD2P25440 801 aaKnown RBP15.16■□□□□ 0.02
CBWD3-217ENST00000621474 GABRR2P28476 465 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 SLC5A3P53794 718 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 NR1I3Q14994 352 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 SGO2Q562F6 1265 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 CYP4A22Q5TCH4 519 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 UHRF1Q96T88 793 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-217ENST00000621474 DUSP16Q9BY84 665 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.16■□□□□ 0.02
CBWD3-217ENST00000621474 IL37Q9NZH6 218 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 EPS15L1Q9UBC2 864 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 CDH7Q9ULB5 785 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 MAGED2Q9UNF1 606 aaPredicted RBP15.16■□□□□ 0.02
CBWD3-217ENST00000621474 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.16■□□□□ 0.02
CBWD3-217ENST00000621474 BDP1A6H8Y1 2624 aa15.16■□□□□ 0.02
CBWD3-217ENST00000621474 ATP8B3O60423 1300 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 TULP2O00295 520 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 LAMP2P13473 410 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 CD19P15391 556 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 TRIM21P19474 475 aaKnown RBP15.15■□□□□ 0.02
CBWD3-217ENST00000621474 RFX1P22670 979 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 ANXA13P27216 316 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 CLCN1P35523 988 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 FANCCQ00597 558 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 DRAP1Q14919 205 aaPredicted RBP15.15■□□□□ 0.02
CBWD3-217ENST00000621474 TEAD2Q15562 447 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 OTOP3Q7RTS5 596 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 FAM71AQ8IYT1 594 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 TDRD5Q8NAT2 981 aaKnown RBP15.15■□□□□ 0.02
CBWD3-217ENST00000621474 ANKRD52Q8NB46 1076 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 RNF214Q8ND24 703 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 SCAMP5Q8TAC9 235 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 ZSWIM3Q96MP5 696 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 NR2E1Q9Y466 385 aa15.15■□□□□ 0.02
CBWD3-217ENST00000621474 FAM92AA1XBS5 289 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 F8VZ95 297 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 GOLGA6L19H0YKK7 550 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 CFHP08603 1231 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 KRT5P13647 590 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 GBP2P32456 591 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-217ENST00000621474 JAM2P57087 298 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 CYP4F8P98187 520 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 RAPGEF1Q13905 1077 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 GOLGA7BQ2TAP0 167 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 LCLAT1Q6UWP7 414 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 ZDHHC14Q8IZN3 488 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 GJD3Q8N144 294 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 NUP93Q8N1F7 819 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 ST13P5Q8NFI4 369 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-217ENST00000621474 COL25A1Q9BXS0 654 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-217ENST00000621474 PNPLA8Q9NP80 782 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 KIAA1257Q9ULG3 409 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 HELZP42694 1942 aaKnown RBP15.14■□□□□ 0.01
CBWD3-217ENST00000621474 ZNF197O14709 1029 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 CYP26A1O43174 497 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 SERPINC1P01008 464 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 SSTR3P32745 418 aaPredicted RBP15.14■□□□□ 0.01
CBWD3-217ENST00000621474 PBX1P40424 430 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 POLR2FP61218 127 aaKnown RBP15.14■□□□□ 0.01
CBWD3-217ENST00000621474 PDE4CQ08493 712 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 CNGA2Q16280 664 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 SMYD5Q6GMV2 418 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 SLC47A2Q86VL8 602 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 GAS2L3Q86XJ1 694 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 STK33Q9BYT3 514 aa15.14■□□□□ 0.01
CBWD3-217ENST00000621474 NCANO14594 1321 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 A0A1W2PQC6 194 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 GABBR2O75899 941 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 FCARP24071 287 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 CDC25CP30307 473 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 GNA15P30679 374 aa15.13■□□□□ 0.01
CBWD3-217ENST00000621474 PGFP49763 221 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms