RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 TMEM196Q5HYL7 178 aa25.58■■□□□ 1.69
ATXN3-253ENST00000621269 TDRD10Q5VZ19 366 aaKnown RBP25.58■■□□□ 1.69
ATXN3-253ENST00000621269 ERMP1Q7Z2K6 904 aa25.58■■□□□ 1.69
ATXN3-253ENST00000621269 B3GALNT2Q8NCR0 500 aa25.58■■□□□ 1.69
ATXN3-253ENST00000621269 SH3RF2Q8TEC5 729 aa25.58■■□□□ 1.69
ATXN3-253ENST00000621269 TMEM174Q8WUU8 243 aa25.58■■□□□ 1.69
ATXN3-253ENST00000621269 ATP2A3Q93084 1043 aa25.58■■□□□ 1.69
ATXN3-253ENST00000621269 KCTD10Q9H3F6 313 aa25.58■■□□□ 1.69
ATXN3-253ENST00000621269 ZDHHC9Q9Y397 364 aa25.58■■□□□ 1.69
ATXN3-253ENST00000621269 ATP6V1DQ9Y5K8 247 aa25.58■■□□□ 1.69
ATXN3-253ENST00000621269 DENND4CQ5VZ89 1909 aa25.58■■□□□ 1.69
ATXN3-253ENST00000621269 OBSL1O75147 1896 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 F5P12259 2224 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 ZNF292O60281 2723 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 K7ESF4 209 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 ATG13O75143 517 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 KIF20AO95235 890 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 NR3C1P04150 777 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 RPN1P04843 607 aaKnown RBP25.57■■□□□ 1.68
ATXN3-253ENST00000621269 PFKLP17858 780 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 USP4Q13107 963 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 NCOA4Q13772 614 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 HEATR6Q6AI08 1181 aaKnown RBP25.57■■□□□ 1.68
ATXN3-253ENST00000621269 FSTL4Q6MZW2 842 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 PRR23BQ6ZRT6 265 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 LONP2Q86WA8 852 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 RMDN1Q96DB5 314 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 CHAMP1Q96JM3 812 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 TTLL2Q9BWV7 592 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 ECT2Q9H8V3 914 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 VRTNQ9H8Y1 702 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 ARHGAP26Q9UNA1 814 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 WNT6Q9Y6F9 365 aa25.57■■□□□ 1.68
ATXN3-253ENST00000621269 KIF26AQ9ULI4 1882 aaPredicted RBP25.56■■□□□ 1.68
ATXN3-253ENST00000621269 CALUO43852 315 aaPredicted RBP25.56■■□□□ 1.68
ATXN3-253ENST00000621269 C4BPAP04003 597 aaKnown RBP25.56■■□□□ 1.68
ATXN3-253ENST00000621269 CNR2P34972 360 aa25.56■■□□□ 1.68
ATXN3-253ENST00000621269 CDH8P55286 799 aa25.56■■□□□ 1.68
ATXN3-253ENST00000621269 DMWDQ09019 674 aa25.56■■□□□ 1.68
ATXN3-253ENST00000621269 NR1H3Q13133 447 aa25.56■■□□□ 1.68
ATXN3-253ENST00000621269 P2RY13Q9BPV8 354 aa25.56■■□□□ 1.68
ATXN3-253ENST00000621269 B3GNT5Q9BYG0 378 aa25.56■■□□□ 1.68
ATXN3-253ENST00000621269 ZNF518BQ9C0D4 1074 aa25.56■■□□□ 1.68
ATXN3-253ENST00000621269 SCAND2PQ9GZW5 306 aaPredicted RBP25.56■■□□□ 1.68
ATXN3-253ENST00000621269 SMYD3Q9H7B4 428 aa25.56■■□□□ 1.68
ATXN3-253ENST00000621269 FRMD4BQ9Y2L6 1034 aa25.56■■□□□ 1.68
ATXN3-253ENST00000621269 ATP8B3O60423 1300 aa25.56■■□□□ 1.68
ATXN3-253ENST00000621269 ZNF840PA6NDX5 716 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 ABL1P00519 1130 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 P4HA1P13674 534 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 TCF3P15923 654 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 DRD1P21728 446 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 GJA4P35212 333 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 GALK1P51570 392 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 NDUFA8P51970 172 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 SIM2Q14190 667 aaPredicted RBP25.55■■□□□ 1.68
ATXN3-253ENST00000621269 LPAL2Q16609 132 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 CEP135Q66GS9 1140 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 LAIR1Q6GTX8 287 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 CHFRQ96EP1 664 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 TNIP3Q96KP6 325 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 SLITRK1Q96PX8 696 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 C2orf42Q9NWW7 574 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 GTF3C3Q9Y5Q9 886 aa25.55■■□□□ 1.68
ATXN3-253ENST00000621269 CLDN5O00501 218 aa25.54■■□□□ 1.68
ATXN3-253ENST00000621269 DLG4P78352 724 aa25.54■■□□□ 1.68
ATXN3-253ENST00000621269 IFRD2Q12894 506 aaPredicted RBP25.54■■□□□ 1.68
ATXN3-253ENST00000621269 SGSM1Q2NKQ1 1148 aa25.54■■□□□ 1.68
ATXN3-253ENST00000621269 EML3Q32P44 896 aa25.54■■□□□ 1.68
ATXN3-253ENST00000621269 SCARA5Q6ZMJ2 495 aa25.54■■□□□ 1.68
ATXN3-253ENST00000621269 TMC2Q8TDI7 906 aa25.54■■□□□ 1.68
ATXN3-253ENST00000621269 MED10Q9BTT4 135 aa25.54■■□□□ 1.68
ATXN3-253ENST00000621269 ZNF638Q14966 1978 aaKnown RBP25.53■■□□□ 1.68
ATXN3-253ENST00000621269 GVINP1Q7Z2Y8 2422 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 FAM237AA0A1B0GTK4 181 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 HRO43593 1189 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 VNN1O95497 513 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 EGFP01133 1207 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 HOXA6P31267 233 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 RAP1GAPP47736 663 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 CACNA2D1P54289 1103 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 TAF10Q12962 218 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 NUP93Q8N1F7 819 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 USP18Q9UMW8 372 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 SLC8A2Q9UPR5 921 aa25.53■■□□□ 1.68
ATXN3-253ENST00000621269 IKBKBO14920 756 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 RHOBTB3O94955 611 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 NFATC1O95644 943 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 PRR29P0C7W0 189 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 PUM1Q14671 1186 aaKnown RBP eCLIP25.52■■□□□ 1.68
ATXN3-253ENST00000621269 ZACNQ401N2 412 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 FBXO43Q4G163 708 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 TAF4BQ92750 862 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 CD101Q93033 1021 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 ELMO3Q96BJ8 720 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 LINC00597Q9H2U6 94 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 FBRSL1Q9HCM7 1045 aaKnown RBP25.52■■□□□ 1.68
ATXN3-253ENST00000621269 TRAF3IP3Q9Y228 551 aa25.52■■□□□ 1.68
ATXN3-253ENST00000621269 A0A1W2PQ27 194 aa25.51■■□□□ 1.67
ATXN3-253ENST00000621269 A0A1W2PQ64 194 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms