RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 SERINC5Q86VE9 423 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 RFX6Q8HWS3 928 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 RXFP2Q8WXD0 754 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 COX16Q9P0S2 106 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 PCYOX1Q9UHG3 505 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 KIAA1257Q9ULG3 409 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 PADI3Q9ULW8 664 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 NME7Q9Y5B8 376 aa10.44□□□□□ -0.74
VTA1-205ENST00000620996 SCN1AP35498 2009 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 I3L4J1 428 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 PTGESO14684 152 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 ATP2C2O75185 946 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 LRCH4O75427 683 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 TJP3O95049 919 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 THP07101 528 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 ATF2P15336 505 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 LILRA4P59901 499 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 PPP1R15BQ5SWA1 713 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 WSCD1Q658N2 575 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 PCSK9Q8NBP7 692 aaKnown RBP10.43□□□□□ -0.74
VTA1-205ENST00000620996 GRK7Q8WTQ7 553 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 FAXDC2Q96IV6 333 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 CFAP57Q96MR6 1250 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 RUNDC3BQ96NL0 473 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 UBXN6Q9BZV1 441 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 SENP6Q9GZR1 1112 aaPredicted RBP10.43□□□□□ -0.74
VTA1-205ENST00000620996 DNAI2Q9GZS0 605 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 ASNSD1Q9NWL6 643 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 SAE1Q9UBE0 346 aaPredicted RBP10.43□□□□□ -0.74
VTA1-205ENST00000620996 SRRDQ9UH36 339 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 ADAM21Q9UKJ8 722 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 TCRBV5S1A1TA0A578 114 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 CLDN5O00501 218 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 PIRO00625 290 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 TOMM70O94826 608 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 STAU1O95793 577 aaKnown RBP10.43□□□□□ -0.74
VTA1-205ENST00000620996 KCNE1P15382 129 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 AARSP49588 968 aaKnown RBP eCLIP10.43□□□□□ -0.74
VTA1-205ENST00000620996 CLCNKBP51801 687 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 RAB6CQ53S08 254 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 SH2D3CQ8N5H7 860 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 ARL8AQ96BM9 186 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 FAM149B1Q96BN6 582 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 RAB6CQ9H0N0 254 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 TSPYL2Q9H2G4 693 aaPredicted RBP10.43□□□□□ -0.74
VTA1-205ENST00000620996 DDX56Q9NY93 547 aaKnown RBP10.43□□□□□ -0.74
VTA1-205ENST00000620996 KRT7P08729 469 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 DESP17661 470 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 IL1R2P27930 398 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 MIPP30301 263 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 RABGGTBP53611 331 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 KRT81Q14533 505 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 STILQ15468 1287 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 CLEC4CQ8WTT0 213 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 KBTBD7Q8WVZ9 684 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 GLT1D1Q96MS3 346 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 ADAM2Q99965 735 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 MAK16Q9BXY0 300 aaKnown RBP10.43□□□□□ -0.74
VTA1-205ENST00000620996 UPF3AQ9H1J1 476 aaKnown RBP10.43□□□□□ -0.74
VTA1-205ENST00000620996 LRRC19Q9H756 370 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 C10orf88Q9H8K7 445 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 GPATCH2LQ9NWQ4 482 aa10.43□□□□□ -0.74
VTA1-205ENST00000620996 DDX20Q9UHI6 824 aaKnown RBP10.43□□□□□ -0.74
VTA1-205ENST00000620996 TLDC2A0PJX2 215 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 PRPSAP2O60256 369 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 PFKMP08237 780 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 CD48P09326 243 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 SDC4P31431 198 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 HSPA9P38646 679 aaKnown RBP10.42□□□□□ -0.74
VTA1-205ENST00000620996 SLC8A3P57103 927 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 TFDP3Q5H9I0 405 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 MDH1BQ5I0G3 518 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 B4GALNT4Q76KP1 1039 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 ATL2Q8NHH9 583 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 FAM76AQ8TAV0 307 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 TRPV6Q9H1D0 765 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.42□□□□□ -0.74
VTA1-205ENST00000620996 USP18Q9UMW8 372 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 ARL5CA6NH57 179 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 SGK1O00141 431 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 ACLYP53396 1101 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 CDH6P55285 790 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 CYP1B1Q16678 543 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 TMC3Q7Z5M5 1100 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 UNC93AQ86WB7 457 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 OSTM1Q86WC4 334 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.42□□□□□ -0.74
VTA1-205ENST00000620996 NDRG1Q92597 394 aaKnown RBP10.42□□□□□ -0.74
VTA1-205ENST00000620996 HHIPL1Q96JK4 782 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 TNIP3Q96KP6 325 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 SLC38A7Q9NVC3 462 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 MIOSQ9NXC5 875 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 DNPEPQ9ULA0 475 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 HTTP42858 3142 aa10.42□□□□□ -0.74
VTA1-205ENST00000620996 GRIN2DO15399 1336 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 GOLGA8KD6RF30 607 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 CST8O60676 142 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 IGHA2P01877 340 aa10.41□□□□□ -0.74
VTA1-205ENST00000620996 YY1P25490 414 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms