RNA–Protein interactions for RNA: ENST00000620739.4

TP53-226, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-226ENST00000620739 KLHDC9Q8NEP7 349 aa11.96□□□□□ -0.49
TP53-226ENST00000620739 GABPB2Q8TAK5 448 aaPredicted RBP11.96□□□□□ -0.49
TP53-226ENST00000620739 CD101Q93033 1021 aa11.96□□□□□ -0.49
TP53-226ENST00000620739 RSRC1Q96IZ7 334 aaKnown RBP11.96□□□□□ -0.49
TP53-226ENST00000620739 RPGRIP1Q96KN7 1286 aa11.96□□□□□ -0.49
TP53-226ENST00000620739 YIPF3Q9GZM5 350 aa11.96□□□□□ -0.49
TP53-226ENST00000620739 ITGA11Q9UKX5 1188 aa11.96□□□□□ -0.49
TP53-226ENST00000620739 KRIT1O00522 736 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 GHRP10912 638 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 CCDC142Q17RM4 750 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 C11orf63Q6NUN7 778 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 SLC7A5P1Q8MH63 180 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 ACTRT1Q8TDG2 376 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 TMEM176AQ96HP8 235 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 PBKQ96KB5 322 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 ERVK-5Q9HDB9 667 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 ARFGAP3Q9NP61 516 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 PAPOLBQ9NRJ5 636 aaKnown RBP11.96□□□□□ -0.5
TP53-226ENST00000620739 VPS18Q9P253 973 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 UVRAGQ9P2Y5 699 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 TMEM59LQ9UK28 342 aa11.96□□□□□ -0.5
TP53-226ENST00000620739 CCDC151A5D8V7 595 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 MYO1FO00160 1098 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 RAD51CO43502 376 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 MTA2O94776 668 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 CYP3A5P20815 502 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 CD52P31358 61 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 GBP2P32456 591 aaPredicted RBP11.95□□□□□ -0.5
TP53-226ENST00000620739 TNNC1P63316 161 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 PTPN11Q06124 597 aaPredicted RBP11.95□□□□□ -0.5
TP53-226ENST00000620739 TMEM259Q4ZIN3 620 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 C8orf74Q6P047 294 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 NANOGNBQ7Z5D8 188 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 C11orf96Q7Z7L8 435 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 PHF13Q86YI8 300 aaPredicted RBP11.95□□□□□ -0.5
TP53-226ENST00000620739 ZNF784Q8NCA9 323 aaPredicted RBP11.95□□□□□ -0.5
TP53-226ENST00000620739 RNF169Q8NCN4 708 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 CPXM1Q96SM3 734 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 SELENOOQ9BVL4 669 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 DPEP3Q9H4B8 488 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 PLEKHA5Q9HAU0 1116 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 CNTN3Q9P232 1028 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 AMACRQ9UHK6 382 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 SCN1AP35498 2009 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 GOLGA8SH3BPF8 625 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 PDLIM1O00151 329 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 PGRMC1O00264 195 aaKnown RBP11.95□□□□□ -0.5
TP53-226ENST00000620739 PTGESO14684 152 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 LSM1O15116 133 aaKnown RBP11.95□□□□□ -0.5
TP53-226ENST00000620739 TLR3O15455 904 aaKnown RBP11.95□□□□□ -0.5
TP53-226ENST00000620739 PDGFRBP09619 1106 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 LMO2P25791 158 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 GJC1P36383 396 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 OGDHQ02218 1023 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 ACTN3Q08043 901 aaPredicted RBP11.95□□□□□ -0.5
TP53-226ENST00000620739 ITGA7Q13683 1181 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 TCEAL1Q15170 157 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 KYAT1Q16773 422 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 PTPN20Q4JDL3 420 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 ATP13A4Q4VNC1 1196 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 C9orf57Q5W0N0 161 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 ACOT1Q86TX2 421 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 RNF168Q8IYW5 571 aaPredicted RBP11.95□□□□□ -0.5
TP53-226ENST00000620739 RASGEF1CQ8N431 466 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 ZNF296Q8WUU4 475 aaPredicted RBP11.95□□□□□ -0.5
TP53-226ENST00000620739 FUT8Q9BYC5 575 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 FAM49BQ9NUQ9 324 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 CAPN7Q9Y6W3 813 aa11.95□□□□□ -0.5
TP53-226ENST00000620739 M0QZ92 97 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 SART1O43290 800 aaKnown RBP11.94□□□□□ -0.5
TP53-226ENST00000620739 MGEA5O60502 916 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 KPNA6O60684 536 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 HMGCRP04035 888 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 ATICP31939 592 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 MLH1P40692 756 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 TAS2R40P59535 323 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 ITIH3Q06033 890 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 DMPKQ09013 629 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 ZNF252P-AS1Q0IIN9 211 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 SOWAHAQ2M3V2 549 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 MAP3K21Q5TCX8 1036 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 PLEKHA7Q6IQ23 1121 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 UBE2Q1Q7Z7E8 422 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 TMEM35BQ8NCS4 154 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 GSTCDQ8NEC7 633 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 MCEEQ96PE7 176 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 GAD1Q99259 594 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 SENP6Q9GZR1 1112 aaPredicted RBP11.94□□□□□ -0.5
TP53-226ENST00000620739 TRPV6Q9H1D0 765 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 KLHL11Q9NVR0 708 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 MIOSQ9NXC5 875 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 RNF14Q9UBS8 474 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 KLF15Q9UIH9 416 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 FAM169AQ9Y6X4 670 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 F8VP50 259 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 NDUFB5O43674 189 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 MICAL2O94851 1124 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 ACLYP53396 1101 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 GUCY2DQ02846 1103 aa11.94□□□□□ -0.5
TP53-226ENST00000620739 MYO1EQ12965 1108 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms