RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 MAATS1Q7Z4T9 603 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 KATNAL2Q8IYT4 538 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 ANKRD52Q8NB46 1076 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 PIK3R5Q8WYR1 880 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 MAGOHBQ96A72 148 aaKnown RBP13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 HERPUD2Q9BSE4 406 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 MED10Q9BTT4 135 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 B3GNT5Q9BYG0 378 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 ZWILCHQ9H900 591 aa13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.36□□□□□ -0.27
TNFAIP3-209ENST00000619035 C9IYK1 514 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 BHMG1C9JSJ3 638 aaPredicted RBP13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 PHF2O75151 1096 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 PARNO95453 639 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 SETSIPP0DME0 302 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 RARAP10276 462 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 RALAP11233 206 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 LCP1P13796 627 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 PTPN1P18031 435 aaKnown RBP13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 BRCC3P46736 316 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 KCNJ1P48048 391 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 LMAN1P49257 510 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 TUSC3Q13454 348 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 TAF5Q15542 800 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 SMTNL2Q2TAL5 461 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 NIPA2Q8N8Q9 360 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 SPATA18Q8TC71 538 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 ARL8AQ96BM9 186 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 UROC1Q96N76 676 aa13.35□□□□□ -0.27
TNFAIP3-209ENST00000619035 F8W810 466 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 GABRDO14764 452 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 NBNO60934 754 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 HSF2BPO75031 334 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 LRCH4O75427 683 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 SNX16P57768 344 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 FAM189BP81408 668 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 CDO1Q16878 200 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 KCNT1Q5JUK3 1230 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 KAZNQ674X7 775 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 EXD1Q8NHP7 514 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 C1orf54Q8WWF1 131 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 SLC4A5Q9BY07 1137 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 PCSK1NQ9UHG2 260 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 UTP11Q9Y3A2 253 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 RNF8O76064 485 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 ODC1P11926 461 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 PDGFRAP16234 1089 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 CAPN2P17655 700 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 GPD1P21695 349 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 NNTQ13423 1086 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 SIX1Q15475 284 aaPredicted RBP13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 KIAA0319Q5VV43 1072 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 CCDC137Q6PK04 289 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 OLFML1Q6UWY5 402 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 TMEM110Q86TL2 294 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 FUKQ8N0W3 1084 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 TMEM86AQ8N2M4 240 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 DBF4BQ8NFT6 615 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 FNIP1Q8TF40 1166 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 CLEC4CQ8WTT0 213 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 RXFP2Q8WXD0 754 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 ATG4AQ8WYN0 398 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 SYT15Q9BQS2 421 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 CRISPLD2Q9H0B8 497 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 SNX24Q9Y343 169 aa13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 TDRD15B5MCY1 1934 aaKnown RBP13.34□□□□□ -0.27
TNFAIP3-209ENST00000619035 LRRD1A4D1F6 860 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 FSCN2O14926 492 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 PAPSS1O43252 624 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 GABBR2O75899 941 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 ITGB1P05556 798 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 CHRNA3P32297 505 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 LHX1P48742 406 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 SLC8A3P57103 927 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 SLC6A3Q01959 620 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 RNASELQ05823 741 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 SNX1Q13596 522 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 CUL1Q13616 776 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 PPP2R5EQ16537 467 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 C15orf59Q2T9L4 293 aaPredicted RBP13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 CLLU1OSQ5K130 101 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 CFAP58Q5T655 872 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 SH3PXD2AQ5TCZ1 1133 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 C1orf53Q5VUE5 145 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 TRNP1Q6NT89 227 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 ANKRD33Q7Z3H0 272 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 ANKS1BQ7Z6G8 1248 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 ZNF280BQ86YH2 543 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 JAMLQ86YT9 394 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 CCDC105Q8IYK2 499 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 ARFGAP1Q8N6T3 406 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 OR2W6PQ8NHA6 318 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 STK32AQ8WU08 396 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 RSPH1Q8WYR4 309 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 APBB2Q92870 758 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 RBM41Q96IZ5 413 aaKnown RBP13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 CFAP57Q96MR6 1250 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 TOX2Q96NM4 488 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.28
TNFAIP3-209ENST00000619035 OSBPL8Q9BZF1 889 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms