RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 VTNP04004 478 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 SPRP35270 261 aaPredicted RBP14.46□□□□□ -0.09
CNOT3-210ENST00000618939 TGFB2P61812 414 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 AP1ARQ63HQ0 302 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 LENG9Q96B70 501 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 MFSD14AQ96MC6 490 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 UBQLN1Q9UMX0 589 aaKnown RBP14.46□□□□□ -0.09
CNOT3-210ENST00000618939 PPME1Q9Y570 386 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 CCDC78A2IDD5 438 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 C3orf70A6NLC5 250 aaPredicted RBP14.46□□□□□ -0.09
CNOT3-210ENST00000618939 SNX3O60493 162 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 DRD4P21917 467 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 DCAF4L1Q3SXM0 396 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 SV2CQ496J9 727 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 ATP13A4Q4VNC1 1196 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 ERO1BQ86YB8 467 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 TFB1MQ8WVM0 346 aaKnown RBP14.46□□□□□ -0.09
CNOT3-210ENST00000618939 DMAC2Q9NW81 257 aa14.46□□□□□ -0.09
CNOT3-210ENST00000618939 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.46□□□□□ -0.09
CNOT3-210ENST00000618939 DFFAO00273 331 aa14.46□□□□□ -0.1
CNOT3-210ENST00000618939 NOMO3P69849 1222 aa14.46□□□□□ -0.1
CNOT3-210ENST00000618939 DGKZQ13574 1117 aa14.46□□□□□ -0.1
CNOT3-210ENST00000618939 DAB2IPQ5VWQ8 1189 aa14.46□□□□□ -0.1
CNOT3-210ENST00000618939 SLFN11Q7Z7L1 901 aa14.46□□□□□ -0.1
CNOT3-210ENST00000618939 AMIGO3Q86WK7 504 aa14.46□□□□□ -0.1
CNOT3-210ENST00000618939 PIP4K2CQ8TBX8 421 aa14.46□□□□□ -0.1
CNOT3-210ENST00000618939 TRAPPC12Q8WVT3 735 aa14.46□□□□□ -0.1
CNOT3-210ENST00000618939 ZNF669Q96BR6 464 aaPredicted RBP14.46□□□□□ -0.1
CNOT3-210ENST00000618939 CPB2Q96IY4 423 aa14.46□□□□□ -0.1
CNOT3-210ENST00000618939 BCAS3Q9H6U6 928 aa14.46□□□□□ -0.1
CNOT3-210ENST00000618939 SPDYE16A6NNV3 312 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-210ENST00000618939 NVLO15381 856 aaKnown RBP14.45□□□□□ -0.1
CNOT3-210ENST00000618939 ATP6V1G2O95670 118 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 CCNE2O96020 404 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 UBA1P22314 1058 aaKnown RBP14.45□□□□□ -0.1
CNOT3-210ENST00000618939 CHKAP35790 457 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 ELK3P41970 407 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 PTGER2P43116 358 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 RTP1P59025 263 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 SPIRE1Q08AE8 756 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 KRT80Q6KB66 452 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 SLC7A14Q8TBB6 771 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 DNAJC9Q8WXX5 260 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 TMEM134Q9H6X4 195 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 ABCF3Q9NUQ8 709 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.45□□□□□ -0.1
CNOT3-210ENST00000618939 OPLAHO14841 1288 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 TM9SF1O15321 606 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 ANP32DO95626 131 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 TAF6P49848 677 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 BTBD8Q5XKL5 378 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 MTDHQ86UE4 582 aaKnown RBP14.45□□□□□ -0.1
CNOT3-210ENST00000618939 SUGP1Q8IWZ8 645 aaKnown RBP14.45□□□□□ -0.1
CNOT3-210ENST00000618939 OR6P1Q8NGX9 317 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 CKAP2Q8WWK9 683 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 CENPKQ9BS16 269 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 FZD1Q9UP38 647 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 E2F8A0AVK6 867 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 SERPINB4P48594 390 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 KLC1Q07866 573 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 PRPF39Q86UA1 669 aaKnown RBP14.45□□□□□ -0.1
CNOT3-210ENST00000618939 CCDC33Q8N5R6 958 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 OR5B17Q8NGF7 314 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.45□□□□□ -0.1
CNOT3-210ENST00000618939 RRN3P2A6NIE6 340 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 KLHL2O95198 593 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 PYGBP11216 843 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 CASP2P42575 452 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 DGKDQ16760 1214 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 EXOC3L1Q86VI1 746 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 TRIM62Q9BVG3 475 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 SLC24A3Q9HC58 644 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 AJAP1Q9UKB5 411 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-210ENST00000618939 TSPAN16Q9UKR8 245 aa14.45□□□□□ -0.1
CNOT3-210ENST00000618939 BARX2Q9UMQ3 279 aaPredicted RBP14.45□□□□□ -0.1
CNOT3-210ENST00000618939 S100BP04271 92 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-210ENST00000618939 INSRRP14616 1297 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 MIPP30301 263 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 FDFT1P37268 417 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 KIF19Q2TAC6 998 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 LRRC38Q5VT99 294 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 PHF13Q86YI8 300 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-210ENST00000618939 MYLK4Q86YV6 388 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-210ENST00000618939 RNF135Q8IUD6 432 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 USP33Q8TEY7 942 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 SLITRK1Q96PX8 696 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 MAGEB5Q9BZ81 275 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 MROH8Q9H579 483 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 NR2E1Q9Y466 385 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 NFASCO94856 1347 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 NKRFO15226 690 aaKnown RBP eCLIP14.44□□□□□ -0.15e-14■□□□□ 8.7
CNOT3-210ENST00000618939 DNAJC8O75937 253 aaPredicted RBP14.44□□□□□ -0.1
CNOT3-210ENST00000618939 PAEPP09466 180 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 MYL2P10916 166 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 PNPLA4P41247 253 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 NDST1P52848 882 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 PRAMEP78395 509 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 KIZQ2M2Z5 673 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 DENND5BQ6ZUT9 1274 aa14.44□□□□□ -0.1
CNOT3-210ENST00000618939 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms