RNA–Protein interactions for RNA: ENST00000618778.4

GTDC1-220, Transcript of glycosyltransferase like domain containing 1, humanhuman

TSL 5 BASIC

Gene GTDC1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-220ENST00000618778 GOLPH3Q9H4A6 298 aa5.68□□□□□ -1.5
GTDC1-220ENST00000618778 VIPAS39Q9H9C1 493 aa5.68□□□□□ -1.5
GTDC1-220ENST00000618778 RNF14Q9UBS8 474 aa5.68□□□□□ -1.5
GTDC1-220ENST00000618778 CPSF3Q9UKF6 684 aaKnown RBP5.68□□□□□ -1.5
GTDC1-220ENST00000618778 USP15Q9Y4E8 981 aaPredicted RBP5.68□□□□□ -1.5
GTDC1-220ENST00000618778 DENND4CQ5VZ89 1909 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 FOXN3O00409 490 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-220ENST00000618778 SPTLC1O15269 473 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 OGTO15294 1046 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 RFPL2O75678 378 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 ALDH2P05091 517 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 H2AFZP0C0S5 128 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 GLUD2P49448 558 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 DNA2P51530 1060 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 CLCN4P51793 760 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 VAMP7P51809 220 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 GALCP54803 685 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 GYS2P54840 703 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 DSG1Q02413 1049 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 KRT17Q04695 432 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 MAP9Q49MG5 647 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 RARS2Q5T160 578 aaKnown RBP5.67□□□□□ -1.5
GTDC1-220ENST00000618778 FAM171A1Q5VUB5 890 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 ANKRD54Q6NXT1 300 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 H2AFVQ71UI9 128 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 INTS8Q75QN2 995 aaKnown RBP5.67□□□□□ -1.5
GTDC1-220ENST00000618778 ZNF771Q7L3S4 317 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-220ENST00000618778 SLFN11Q7Z7L1 901 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 VPS36Q86VN1 386 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 XXYLT1Q8NBI6 393 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 AENQ8WTP8 325 aaKnown RBP5.67□□□□□ -1.5
GTDC1-220ENST00000618778 SLC22A17Q8WUG5 538 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 RIN2Q8WYP3 895 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-220ENST00000618778 KCNN1Q92952 543 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 GDAP1L1Q96MZ0 367 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 FAM213AQ9BRX8 229 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 S1PR5Q9H228 398 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 SMOC2Q9H3U7 446 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 POMKQ9H5K3 350 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 UBN1Q9NPG3 1134 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 TOPORSQ9NS56 1045 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-220ENST00000618778 HSPBP1Q9NZL4 362 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-220ENST00000618778 KANSL3Q9P2N6 904 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 CD207Q9UJ71 328 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 INTUQ9ULD6 942 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 COG5Q9UP83 839 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 TIMM13Q9Y5L4 95 aaPredicted RBP5.67□□□□□ -1.5
GTDC1-220ENST00000618778 GREB1Q4ZG55 1949 aa5.67□□□□□ -1.5
GTDC1-220ENST00000618778 A0A0A6YYK5 440 aaPredicted RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 CES2O00748 559 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 MAPK13O15264 365 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 HCRTO43612 131 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 B3GAT3O94766 335 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 SYF2O95926 243 aaKnown RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 URODP06132 367 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 OR4Q2P0C623 313 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 KRT13P13646 458 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 KCNE1P15382 129 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 NOP2P46087 812 aaKnown RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 YARSP54577 528 aaKnown RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 SNRPFP62306 86 aaKnown RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 ZP2Q05996 745 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 GPS2Q13227 327 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 ARHGAP44Q17R89 818 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 CCDC70Q6NSX1 233 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 TMC5Q6UXY8 1006 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 PALB2Q86YC2 1186 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 CBWD2Q8IUF1 395 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 ARHGEF19Q8IW93 802 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 HACE1Q8IYU2 909 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 POMGNT1Q8WZA1 660 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 RUBCNQ92622 972 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 TMEM209Q96SK2 561 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 CLSTN3Q9BQT9 956 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 SELENOOQ9BVL4 669 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 NGRNQ9NPE2 291 aaKnown RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 MAN1C1Q9NR34 630 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 CHST7Q9NS84 486 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 STIM2Q9P246 746 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 TMEM59LQ9UK28 342 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 ADAM21Q9UKJ8 722 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 AGO2Q9UKV8 859 aaKnown RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 HPCAL4Q9UM19 191 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 DAAM1Q9Y4D1 1078 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 STYXL1Q9Y6J8 313 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 SF3B1O75533 1304 aaKnown RBP eCLIP5.66□□□□□ -1.53e-6■■■■■ 137.9
GTDC1-220ENST00000618778 ZNF638Q14966 1978 aaKnown RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 KIF26AQ9ULI4 1882 aaPredicted RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 FAM86C2PA6NEL3 165 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 P4HA2O15460 535 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 TGM5O43548 720 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 VNN2O95498 520 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 GLI1P08151 1106 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 CD46P15529 392 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 TNNT3P45378 269 aaPredicted RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 GCLMP48507 274 aa5.66□□□□□ -1.5
GTDC1-220ENST00000618778 AARSP49588 968 aaKnown RBP eCLIP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 RNASE9P60153 205 aaKnown RBP5.66□□□□□ -1.5
GTDC1-220ENST00000618778 SMAD4Q13485 552 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms