RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 XPR1Q9UBH6 696 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 SHOC2Q9UQ13 582 aa3.75□□□□□ -1.81
TARDBP-220ENST00000618606 UBE2Q2LH0YL09 131 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 hCG_1984214I3L0E3 225 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 USP1O94782 785 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 GRPP07492 148 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 TPTEP56180 551 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 HTRA4P83105 476 aaPredicted RBP3.74□□□□□ -1.81
TARDBP-220ENST00000618606 MYO1EQ12965 1108 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 FAM50AQ14320 339 aaKnown RBP3.74□□□□□ -1.81
TARDBP-220ENST00000618606 RNASE12Q5GAN4 147 aaKnown RBP3.74□□□□□ -1.81
TARDBP-220ENST00000618606 L1TD1Q5T7N2 865 aaKnown RBP3.74□□□□□ -1.81
TARDBP-220ENST00000618606 NRACQ8N912 160 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 PCSK9Q8NBP7 692 aaKnown RBP3.74□□□□□ -1.81
TARDBP-220ENST00000618606 ADAMTS18Q8TE60 1221 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 PPP1R10Q96QC0 940 aaKnown RBP3.74□□□□□ -1.81
TARDBP-220ENST00000618606 MESP1Q9BRJ9 268 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 KLHL13Q9P2N7 655 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 CCNL1Q9UK58 526 aaPredicted RBP3.74□□□□□ -1.81
TARDBP-220ENST00000618606 PCDHA6Q9UN73 950 aa3.74□□□□□ -1.81
TARDBP-220ENST00000618606 MRPS17Q9Y2R5 130 aaKnown RBP3.74□□□□□ -1.81
TARDBP-220ENST00000618606 LY6G6EA0A0G2JKS1 128 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 ERVV-2B6SEH9 535 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 A1BGP04217 495 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 THP07101 528 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 TMEM191BP0C7N4 346 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 CYP2C9P11712 490 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 MYCLP12524 364 aaPredicted RBP3.73□□□□□ -1.81
TARDBP-220ENST00000618606 KRT10P13645 584 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 PDE6CP51160 858 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 RENBPP51606 427 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 EVA1CP58658 441 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 LRRC41Q15345 812 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 CYP1B1Q16678 543 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 KRTAP27-1Q3LI81 207 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 KHDC1LQ5JSQ8 128 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 TMEM240Q5SV17 173 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 ZNF280BQ86YH2 543 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 ABRAQ8N0Z2 381 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 KRT78Q8N1N4 520 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 RSPRY1Q96DX4 576 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 SLC35A4Q96G79 324 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 CDK5RAP3Q96JB5 506 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 GTPBP4Q9BZE4 634 aaKnown RBP3.73□□□□□ -1.81
TARDBP-220ENST00000618606 ASPSCR1Q9BZE9 553 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 CIPCQ9C0C6 399 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 CXorf36Q9H7Y0 433 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 MED16Q9Y2X0 877 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 SBNO2Q9Y2G9 1366 aa3.73□□□□□ -1.81
TARDBP-220ENST00000618606 TCF20Q9UGU0 1960 aaKnown RBP3.72□□□□□ -1.81
TARDBP-220ENST00000618606 FAM90A10PA6NDY2 464 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 BTBD19C9JJ37 291 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 SNUPNO95149 360 aaKnown RBP3.72□□□□□ -1.81
TARDBP-220ENST00000618606 AKAP5P24588 427 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 KCNJ5P48544 419 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 ALDH5A1P51649 535 aaPredicted RBP3.72□□□□□ -1.81
TARDBP-220ENST00000618606 DGKEP52429 567 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 UCP3P55916 312 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 WNT3P56703 355 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 RBMS2Q15434 407 aaKnown RBP3.72□□□□□ -1.81
TARDBP-220ENST00000618606 FAM187BQ17R55 369 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 LY6KQ17RY6 165 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 ZIK1Q3SY52 487 aaPredicted RBP3.72□□□□□ -1.81
TARDBP-220ENST00000618606 C10orf25Q5T742 122 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 RNF187Q5TA31 235 aaPredicted RBP3.72□□□□□ -1.81
TARDBP-220ENST00000618606 DEPDC1Q5TB30 811 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 SERPINA13PQ6UXR4 307 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 BCDIN3DQ7Z5W3 292 aaKnown RBP3.72□□□□□ -1.81
TARDBP-220ENST00000618606 CATIPQ7Z7H3 387 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 SLC15A3Q8IY34 581 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 IZUMO1Q8IYV9 350 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.72□□□□□ -1.81
TARDBP-220ENST00000618606 OSCP1Q8WVF1 389 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 MVB12AQ96EY5 273 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 DPCDQ9BVM2 203 aaPredicted RBP3.72□□□□□ -1.81
TARDBP-220ENST00000618606 SARS2Q9NP81 518 aaKnown RBP3.72□□□□□ -1.81
TARDBP-220ENST00000618606 ASIC5Q9NY37 505 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 TFCP2L1Q9NZI6 479 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 TMX2Q9Y320 296 aa3.72□□□□□ -1.81
TARDBP-220ENST00000618606 AP4M1O00189 453 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 DSCR3O14972 297 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 OAZ2O95190 189 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 FGAP02671 866 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 XRCC6P12956 609 aaKnown RBP eCLIP3.71□□□□□ -1.82
TARDBP-220ENST00000618606 PRF1P14222 555 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 FPR3P25089 353 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 HOXD9P28356 352 aaPredicted RBP3.71□□□□□ -1.82
TARDBP-220ENST00000618606 ADORA2AP29274 412 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 SLC11A2P49281 568 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 THBS3P49746 956 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 E2F1Q01094 437 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 SHC4Q6S5L8 630 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 CAND1Q86VP6 1230 aaKnown RBP3.71□□□□□ -1.82
TARDBP-220ENST00000618606 GAS2L3Q86XJ1 694 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 SFTPA1Q8IWL2 248 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 ZBTB8BQ8NAP8 495 aaPredicted RBP3.71□□□□□ -1.82
TARDBP-220ENST00000618606 PLBD2Q8NHP8 589 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 HSPBAP1Q96EW2 488 aa3.71□□□□□ -1.82
TARDBP-220ENST00000618606 MRGPRX1Q96LB2 322 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms