RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 FAM49BQ9NUQ9 324 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 PARP2Q9UGN5 583 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 FAM169AQ9Y6X4 670 aa18.42■□□□□ 0.54
CNOT3-209ENST00000617930 A0A087WUV0 522 aaPredicted RBP18.41■□□□□ 0.54
CNOT3-209ENST00000617930 KRT1P04264 644 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 KCNE1P15382 129 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 THPOP40225 353 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 CDKN2BP42772 138 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 CCNG2Q16589 344 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 SMTNL2Q2TAL5 461 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 GOLGA7BQ2TAP0 167 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 TRAF7Q6Q0C0 670 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 SPOCD1Q6ZMY3 1216 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 GLIS1Q8NBF1 620 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 SLC43A3Q8NBI5 491 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 FNIP1Q8TF40 1166 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 KHSRPQ92945 711 aaKnown RBP eCLIP18.41■□□□□ 0.54
CNOT3-209ENST00000617930 CENPHQ9H3R5 247 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 CACNG4Q9UBN1 327 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 ST3GAL5Q9UNP4 418 aa18.41■□□□□ 0.54
CNOT3-209ENST00000617930 PTGESO14684 152 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 SHBGP04278 402 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 CD48P09326 243 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 MYZAPP0CAP1 466 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 RGS7P49802 495 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 RHBDF2Q6PJF5 856 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 FAM183BPQ6ZVS7 135 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 TADA2BQ86TJ2 420 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 ZFP42Q96MM3 310 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 TMBIM4Q9HC24 238 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 UBQLN1Q9UMX0 589 aaKnown RBP18.4■□□□□ 0.54
CNOT3-209ENST00000617930 MKI67P46013 3256 aaKnown RBP18.4■□□□□ 0.54
CNOT3-209ENST00000617930 hCG_1818297A0A087WSY0 165 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 MOXD2PA6NHM9 499 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 MGEA5O60502 916 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 GUCY1A3Q02108 690 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 MTMR3Q13615 1198 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 PPP1R7Q15435 360 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 CYP4V2Q6ZWL3 525 aaPredicted RBP18.4■□□□□ 0.54
CNOT3-209ENST00000617930 LIMS2Q7Z4I7 341 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 APBB1IPQ7Z5R6 666 aaPredicted RBP18.4■□□□□ 0.54
CNOT3-209ENST00000617930 GSTCDQ8NEC7 633 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 RUNDC3BQ96NL0 473 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 PEBP4Q96S96 227 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 SEMA4AQ9H3S1 761 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 SYNCQ9H7C4 482 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 ZWILCHQ9H900 591 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 KIAA1257Q9ULG3 409 aa18.4■□□□□ 0.54
CNOT3-209ENST00000617930 ATF7P17544 494 aaPredicted RBP18.39■□□□□ 0.53
CNOT3-209ENST00000617930 LSP1P33241 339 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 PTK6Q13882 451 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 CCDC142Q17RM4 750 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 FBXO47Q5MNV8 452 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 B4GALNT4Q76KP1 1039 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 ARFGAP2Q8N6H7 521 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 ATL2Q8NHH9 583 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 SLC35F5Q8WV83 523 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 FAM124BQ9H5Z6 455 aaPredicted RBP18.39■□□□□ 0.53
CNOT3-209ENST00000617930 PAK6Q9NQU5 681 aaPredicted RBP18.39■□□□□ 0.53
CNOT3-209ENST00000617930 WDR35Q9P2L0 1181 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 DNPEPQ9ULA0 475 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 LRRD1A4D1F6 860 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 KPNA7A9QM74 516 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 GRAP2O75791 330 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 PDGFRBP09619 1106 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 GHRP10912 638 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 CD52P31358 61 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 CHKAP35790 457 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 MBTPS1Q14703 1052 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 FAM102AQ5T9C2 384 aaPredicted RBP18.39■□□□□ 0.53
CNOT3-209ENST00000617930 MICALL1Q8N3F8 863 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 OR6B3Q8NGW1 331 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 MAIP1Q8WWC4 291 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 RBM41Q96IZ5 413 aaKnown RBP18.39■□□□□ 0.53
CNOT3-209ENST00000617930 GLT1D1Q96MS3 346 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 PWWP2AQ96N64 755 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 TSEN34Q9BSV6 310 aaKnown RBP18.39■□□□□ 0.53
CNOT3-209ENST00000617930 EPN3Q9H201 632 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 SAE1Q9UBE0 346 aaPredicted RBP18.39■□□□□ 0.53
CNOT3-209ENST00000617930 PCSK1NQ9UHG2 260 aa18.39■□□□□ 0.53
CNOT3-209ENST00000617930 LIASO43766 372 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 CABYRO75952 493 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 KLRC2P26717 231 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 MIPP30301 263 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 HPDP32754 393 aaPredicted RBP18.38■□□□□ 0.53
CNOT3-209ENST00000617930 PMS2P54278 862 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 PTK7Q13308 1070 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 LPIN1Q14693 890 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 POLNQ7Z5Q5 900 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 DNAJC5GQ8N7S2 189 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 HAUS1Q96CS2 278 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 SLC4A5Q9BY07 1137 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 B3GNT5Q9BYG0 378 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 PHF24Q9UPV7 400 aa18.38■□□□□ 0.53
CNOT3-209ENST00000617930 C2CD4BA6NLJ0 364 aa18.37■□□□□ 0.53
CNOT3-209ENST00000617930 CCDC130P13994 396 aa18.37■□□□□ 0.53
CNOT3-209ENST00000617930 PTPN7P35236 360 aa18.37■□□□□ 0.53
CNOT3-209ENST00000617930 VPS41P49754 854 aa18.37■□□□□ 0.53
CNOT3-209ENST00000617930 CDR1P51861 262 aa18.37■□□□□ 0.53
CNOT3-209ENST00000617930 PDE4CQ08493 712 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms