RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 GPD2P43304 727 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 SSR1P43307 286 aaKnown RBP17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 TSPY1Q01534 308 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 ELAVL2Q12926 359 aaKnown RBP17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 PDCLQ13371 301 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 ORC1Q13415 861 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 HADHQ16836 314 aaKnown RBP17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 ZNF572Q7Z3I7 529 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 NPAS4Q8IUM7 802 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 RHOT1Q8IXI2 618 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 B3GALNT2Q8NCR0 500 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 RUBCNQ92622 972 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 TOP1MTQ969P6 601 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 PSMB7Q99436 277 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 ZSWIM1Q9BR11 485 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 MIOSQ9NXC5 875 aa17.68■□□□□ 0.42
TRAPPC3-210ENST00000617904 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 SIGLEC16A6NMB1 481 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 MEIS3P2A8K0S8 358 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 TMEM189-UBE2V1I3L0A0 370 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 GABRDO14764 452 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 PSTPIP1O43586 416 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 RNF8O76064 485 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 PTPN1P18031 435 aaKnown RBP17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 TYMPP19971 482 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 CXCR5P32302 372 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 AARSP49588 968 aaKnown RBP eCLIP17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 GLE1Q53GS7 698 aaKnown RBP17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 PPP1R26Q5T8A7 1209 aaPredicted RBP17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 WSCD1Q658N2 575 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 CREG2Q8IUH2 290 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 FBXO22Q8NEZ5 403 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 UBA3Q8TBC4 463 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 FNIP1Q8TF40 1166 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 KBTBD7Q8WVZ9 684 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 HSFY1Q96LI6 401 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 FAM49BQ9NUQ9 324 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 RNF19AQ9NV58 838 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 ASNSD1Q9NWL6 643 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 PCDHA3Q9Y5H8 950 aa17.67■□□□□ 0.42
TRAPPC3-210ENST00000617904 BRWD1Q9NSI6 2320 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 BDP1A6H8Y1 2624 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 TMEM191CA6NGB0 347 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 GOLGA8SH3BPF8 625 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 ERLIN1O75477 346 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 TADA2AO75478 443 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 CYP11A1P05108 521 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 CFHP08603 1231 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 CTNNA1P35221 906 aaKnown RBP17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 SCNN1AP37088 669 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 OR1G1P47890 313 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 PTP4A2Q12974 167 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 ZFYVE27Q5T4F4 411 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 OR6B2Q6IFH4 312 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 RTN4RL1Q86UN2 441 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 SUSD3Q96L08 255 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 RUNDC3BQ96NL0 473 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 MCEEQ96PE7 176 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 HNRNPABQ99729 332 aaKnown RBP17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 SYT15Q9BQS2 421 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 ACBD6Q9BR61 282 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 TMEM175Q9BSA9 504 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 UBE2ZQ9H832 354 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 DDX56Q9NY93 547 aaKnown RBP17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 TTC7AQ9ULT0 858 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 PCDHB8Q9UN66 801 aa17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 PACSIN2Q9UNF0 486 aaPredicted RBP17.66■□□□□ 0.42
TRAPPC3-210ENST00000617904 M0QZQ0 153 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 SART1O43290 800 aaKnown RBP17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 ALDH2P05091 517 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 FAM200BP0CF97 657 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 ADORA2BP29275 332 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 LONRF2Q1L5Z9 754 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 ERCC6LQ2NKX8 1250 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 PTPN20Q4JDL3 420 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 FAM102AQ5T9C2 384 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 RSRC2Q7L4I2 434 aaKnown RBP17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 RASGEF1CQ8N431 466 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 WDTC1Q8N5D0 677 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 SPATA4Q8NEY3 305 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 COG1Q8WTW3 980 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 MCRS1Q96EZ8 462 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 C1QTNF1Q9BXJ1 281 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 OXCT2Q9BYC2 517 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 EPHX3Q9H6B9 360 aa17.65■□□□□ 0.42
TRAPPC3-210ENST00000617904 XPO1O14980 1071 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 ZNF185O15231 689 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 UPP2O95045 317 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 KRT7P08729 469 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 PSMA2P25787 234 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 PLCB3Q01970 1234 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 YWHAHQ04917 246 aaPredicted RBP17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 LRRC38Q5VT99 294 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 OVOS1Q6IE37 1185 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 C4orf50Q6ZRC1 276 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 MTERF4Q7Z6M4 381 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 XYLT1Q86Y38 959 aa17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 DCP1BQ8IZD4 617 aaKnown RBP17.64■□□□□ 0.41
TRAPPC3-210ENST00000617904 MMGT1Q8N4V1 131 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms